PDB Chemical Component C5E

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C5E

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O	C	1.251	1.221
C	N	1.407	1.356
C	C1	1.387	1.401
N	C5	1.466	1.464
N	C4	1.413	1.353
C5	C6	1.523	1.519
C6	C10	1.519	1.521
C6	C7	1.511	1.532
C10	N1	1.455	1.466
N1	C9	1.484	1.471
C9	C8	1.524	1.537
C8	C7	1.503	1.534
C8	C4	1.474	1.512
C4	C3	1.377	1.360
C3	C2	1.379	1.400
C2	C1	1.375	1.365
C1	H1	1.080	1.079
C5	H51C	1.100	1.090
C5	H52C	1.100	1.090
C6	H6	1.100	1.090
C10	H101	1.100	1.090
C10	H102	1.100	1.090
C7	H71C	1.100	1.090
C7	H72C	1.100	1.090
N1	HA	1.000	1.009
C9	H91C	1.100	1.091
C9	H92C	1.100	1.090
C8	H8	1.100	1.090
C3	H3	1.080	1.080
C2	H2	1.080	1.080

Bond Angles for C5E

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O	C	N	118.3	119.6
O	C	C1	119.1	119.6
N	C	C1	122.5	120.8
C	N	C5	111.0	116.9
C	N	C4	114.9	119.8
C	C1	C2	120.0	119.1
C	C1	H1	120.0	120.4
C5	N	C4	110.8	123.2
N	C5	C6	111.4	112.4
N	C5	H51C	109.0	108.9
N	C5	H52C	109.0	108.9
N	C4	C8	119.0	122.0
N	C4	C3	122.5	120.6
C5	C6	C10	110.7	111.9
C5	C6	C7	107.6	109.4
C6	C5	H51C	109.0	108.9
C6	C5	H52C	109.0	108.9
C5	C6	H6	108.3	108.4
C10	C6	C7	113.2	110.8
C6	C10	N1	114.6	111.1
C10	C6	H6	108.4	108.4
C6	C10	H101	108.2	109.2
C6	C10	H102	108.2	109.2
C6	C7	C8	107.7	107.5
C7	C6	H6	108.4	107.9
C6	C7	H71C	109.9	109.8
C6	C7	H72C	109.9	109.8
C10	N1	C9	112.3	111.2
N1	C10	H101	108.2	109.2
N1	C10	H102	108.2	109.1
C10	N1	HA	108.8	111.0
N1	C9	C8	114.2	108.0
C9	N1	HA	108.8	111.0
N1	C9	H91C	108.3	109.7
N1	C9	H92C	108.3	109.8
C9	C8	C7	108.0	108.0
C9	C8	C4	114.1	107.5
C8	C9	H91C	108.3	109.7
C8	C9	H92C	108.3	109.8
C9	C8	H8	109.4	110.6
C7	C8	C4	105.5	109.2
C8	C7	H71C	109.9	109.9
C8	C7	H72C	109.9	109.9
C7	C8	H8	109.7	110.5
C8	C4	C3	118.5	117.3
C4	C8	H8	110.1	111.0
C4	C3	C2	120.2	120.5
C4	C3	H3	119.9	119.8
C3	C2	C1	119.7	118.9
C2	C3	H3	119.9	119.7
C3	C2	H2	120.2	120.6
C2	C1	H1	120.0	120.5
C1	C2	H2	120.1	120.5
H51C	C5	H52C	109.4	108.8
H101	C10	H102	109.5	109.1
H71C	C7	H72C	109.5	109.9
H91C	C9	H92C	109.5	109.8

Torsion Angles for C5E

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N	C	O	C1	176.6	180.3
O	C	N	C5	52.4	7.5
O	C	N	C4	179.0	185.8
O	C	C1	C2	179.2	177.8
O	C	C1	H1	359.2	358.1
O	C	N	C1	183.5	179.7
N	C	C1	C2	2.8	357.5
N	C	C1	H1	182.8	177.8
C5	N	C	C4	233.3	181.6
C	N	C5	C6	178.5	197.5
C	N	C5	H51C	298.8	318.2
C	N	C5	H52C	58.1	76.7
C	N	C4	C8	182.2	171.8
C	N	C4	C3	4.0	353.4
O	C	C1	N	176.5	180.3
C1	C	N	C5	228.9	187.8
C1	C	N	C4	355.5	6.1
C3	C2	C1	C	359.7	359.4
C2	C1	C	H1	180.0	179.7
C	C1	C2	H2	179.7	179.1
C5	N	C	C1	228.9	187.8
C	N	C5	C4	128.9	178.3
C5	N	C4	C8	309.0	350.1
C5	N	C4	C3	130.8	171.7
N	C5	C6	C10	65.5	75.9
N	C5	C6	C7	301.2	312.7
C6	C5	N	H51C	239.7	239.3
C6	C5	N	H52C	120.3	120.8
N	C5	C6	H6	184.1	195.3
H51C	C5	N	H52C	240.6	241.5
C4	N	C	C1	355.5	6.1
C	N	C4	C5	233.2	181.8
C4	N	C5	C6	49.5	19.2
C4	N	C5	H51C	169.8	139.9
C4	N	C5	H52C	289.2	258.4
C9	C8	C4	N	298.4	271.4
C7	C8	C4	N	56.9	28.3
C8	C4	N	C3	178.2	178.4
N	C4	C8	H8	175.1	150.3
N	C4	C3	C2	358.1	3.4
N	C4	C3	H3	178.1	183.4
C6	C5	N	C4	49.5	19.2
N	C5	C6	H51C	120.3	120.7
N	C5	C6	H52C	239.7	239.2
C10	C6	C5	C7	124.3	123.2
C5	C6	C10	N1	288.0	292.9
C10	C6	C5	H6	241.3	240.6
C5	C6	C10	H101	48.8	53.4
C5	C6	C10	H102	167.3	172.6
C5	C6	C7	C8	65.5	66.8
C7	C6	C5	H6	117.1	117.4
C5	C6	C7	H71C	185.2	186.4
C5	C6	C7	H72C	305.8	307.3
H51C	C5	C6	H52C	119.4	118.5
C5	C6	C10	C7	239.0	237.6
C10	C6	C5	H51C	305.2	315.2
C10	C6	C5	H52C	185.8	196.6
C5	C6	C10	H6	118.6	119.4
C10	C6	C7	C8	302.8	303.0
C7	C6	C10	H6	239.6	241.8
C10	C6	C7	H71C	62.5	62.6
C10	C6	C7	H72C	183.1	183.5
C6	C10	N1	C9	316.5	301.6
N1	C10	C6	H101	239.2	239.6
N1	C10	C6	H102	120.7	120.4
C6	C10	N1	HA	76.9	65.7
H101	C10	C6	H102	241.5	240.8
C5	C6	C7	C10	122.7	123.8
C7	C6	C5	H51C	180.9	192.0
C7	C6	C5	H52C	61.5	73.5
C5	C6	C7	H6	243.0	242.2
C7	C6	C10	N1	49.0	55.3
C10	C6	C7	H6	120.3	118.4
C7	C6	C10	H101	169.7	175.8
C7	C6	C10	H102	288.3	295.0
C9	C8	C7	C6	60.9	61.4
C6	C7	C8	C4	298.5	304.8
C8	C7	C6	H71C	240.3	240.5
C8	C7	C6	H72C	119.7	119.5
C6	C7	C8	H8	180.0	182.5
H71C	C7	C6	H72C	239.5	239.0
N1	C10	C6	C7	49.0	55.3
N1	C10	C6	H6	169.4	173.5
C6	C10	N1	H101	120.7	120.4
C6	C10	N1	H102	239.3	239.6
C10	N1	C9	C8	50.1	62.9
C9	N1	C10	HA	239.6	235.9
C10	N1	C9	H91C	170.8	182.5
C10	N1	C9	H92C	289.4	303.1
H101	C10	N1	H102	118.5	119.2
C9	N1	C10	H101	195.7	181.2
C9	N1	C10	H102	77.2	62.0
C10	N1	C9	HA	120.4	124.1
N1	C9	C8	C7	300.4	295.4
N1	C9	C8	C4	57.3	53.1
C8	C9	N1	H91C	239.3	240.4
C8	C9	N1	H92C	120.7	119.7
N1	C9	C8	H8	181.1	174.4
H91C	C9	N1	H92C	241.4	239.3
N	C4	C8	C9	298.4	271.4
C6	C7	C8	C9	60.9	61.4
C8	C9	N1	HA	289.6	298.8
N1	C9	C8	H91C	120.7	119.6
N1	C9	C8	H92C	239.3	240.3
C7	C8	C9	C4	243.0	242.3
C9	C8	C7	H71C	301.1	301.9
C9	C8	C7	H72C	180.6	180.9
C7	C8	C9	H8	119.3	121.0
C9	C8	C4	C3	116.7	89.8
C4	C8	C9	H8	236.2	238.6
H91C	C9	C8	H92C	118.6	120.7
N	C4	C8	C7	56.9	28.3
C8	C7	C6	H6	182.5	184.6
C6	C7	C8	H71C	119.7	119.5
C6	C7	C8	H72C	240.3	240.5
C9	C8	C7	C4	122.4	116.6
C7	C8	C9	H91C	179.7	175.8
C7	C8	C9	H92C	61.1	55.1
C9	C8	C7	H8	240.9	239.0
C7	C8	C4	C3	235.1	206.7
C4	C8	C7	H8	118.5	122.3
H71C	C7	C8	H72C	120.5	121.0
N	C4	C8	C3	181.7	181.6
C9	C8	C4	C7	241.6	243.1
C4	C8	C9	H91C	296.6	293.5
C4	C8	C9	H92C	178.0	172.8
C9	C8	C4	H8	123.4	121.1
C4	C8	C7	H71C	178.7	185.3
C4	C8	C7	H72C	58.2	64.3
C7	C8	C4	H8	241.8	238.0
C8	C4	C3	C2	179.9	185.0
C8	C4	C3	H3	359.9	5.0
N	C4	C3	C8	178.2	178.4
C3	C4	C8	H8	353.3	328.7
C4	C3	C2	C1	359.9	0.2
C2	C3	C4	H3	180.0	180.0
C4	C3	C2	H2	179.9	180.5
C	C1	C2	C3	359.7	359.4
C4	C3	C2	H3	180.0	180.0
C3	C2	C1	H1	179.7	179.1
C1	C2	C3	H2	180.0	179.6
C	C1	C2	H1	180.0	180.3
C1	C2	C3	H3	179.9	180.2
C3	C2	C1	H2	180.0	180.4
C	C1	H1	C2	180.0	179.7
H1	C1	C2	H2	359.7	358.8
H51C	C5	N	C4	169.8	139.9
N	C5	H51C	C6	238.2	237.1
N	C5	H51C	H52C	119.1	118.6
H51C	C5	C6	C10	305.2	315.2
H51C	C5	C6	C7	180.9	192.0
C6	C5	H51C	H52C	240.9	241.4
H51C	C5	C6	H6	63.8	74.6
H52C	C5	N	C4	289.2	258.4
N	C5	H52C	C6	121.8	122.9
N	C5	H52C	H51C	240.9	241.4
H52C	C5	C6	C10	185.8	196.6
H52C	C5	C6	C7	61.5	73.5
C6	C5	H52C	H51C	119.1	118.6
H52C	C5	C6	H6	304.5	316.1
C5	C6	H6	C10	239.9	238.4
C5	C6	H6	C7	116.6	118.4
H6	C6	C5	H51C	63.8	74.6
H6	C6	C5	H52C	304.5	316.1
C10	C6	H6	C7	236.7	240.0
H6	C6	C10	N1	169.4	173.5
H6	C6	C10	H101	290.1	293.9
H6	C6	C10	H102	48.6	53.1
H6	C6	C7	C8	182.5	184.6
H6	C6	C7	H71C	302.2	304.1
H6	C6	C7	H72C	62.7	65.1
H101	C10	C6	C7	169.7	175.8
C6	C10	H101	N1	235.4	238.4
H101	C10	C6	H6	290.1	293.9
C6	C10	H101	H102	117.7	119.2
H101	C10	N1	C9	195.7	181.2
N1	C10	H101	H102	242.3	240.8
H101	C10	N1	HA	316.2	305.3
H102	C10	C6	C7	288.3	295.0
C6	C10	H102	N1	124.6	121.5
H102	C10	C6	H6	48.6	53.1
C6	C10	H102	H101	242.3	240.8
H102	C10	N1	C9	77.2	62.0
N1	C10	H102	H101	117.7	119.2
H102	C10	N1	HA	197.6	186.1
C6	C7	H71C	C8	241.6	241.9
H71C	C7	C6	H6	302.2	304.1
C6	C7	H71C	H72C	120.8	120.9
H71C	C7	C8	C4	178.7	185.3
C8	C7	H71C	H72C	239.2	239.0
H71C	C7	C8	H8	60.2	63.0
C6	C7	H72C	C8	118.3	118.1
H72C	C7	C6	H6	62.7	65.1
C6	C7	H72C	H71C	239.2	239.1
H72C	C7	C8	C4	58.2	64.3
C8	C7	H72C	H71C	120.8	121.0
H72C	C7	C8	H8	299.7	302.0
C10	N1	HA	C9	237.4	235.8
HA	N1	C10	H101	316.2	305.3
HA	N1	C10	H102	197.6	186.1
HA	N1	C9	C8	289.6	298.8
HA	N1	C9	H91C	50.3	58.4
HA	N1	C9	H92C	168.9	179.1
N1	C9	H91C	C8	235.7	241.5
H91C	C9	N1	HA	50.3	58.4
N1	C9	H91C	H92C	117.8	120.7
H91C	C9	C8	C7	179.7	175.8
H91C	C9	C8	C4	296.6	293.5
C8	C9	H91C	H92C	242.2	239.2
H91C	C9	C8	H8	60.4	54.9
N1	C9	H92C	C8	124.3	118.6
H92C	C9	N1	HA	168.9	179.1
N1	C9	H92C	H91C	242.2	239.3
H92C	C9	C8	C7	61.1	55.1
H92C	C9	C8	C4	178.0	172.8
C8	C9	H92C	H91C	117.8	120.7
H92C	C9	C8	H8	301.8	294.1
C9	C8	H8	C7	118.3	119.5
C9	C8	H8	C4	233.9	240.7
H8	C8	C9	H91C	60.4	54.9
H8	C8	C9	H92C	301.8	294.1
C7	C8	H8	C4	115.6	121.2
H8	C8	C7	H71C	60.2	63.0
H8	C8	C7	H72C	299.7	302.0
H8	C8	C4	C3	353.3	328.7
C4	C3	H3	C2	180.0	180.0
H3	C3	C2	C1	179.9	180.2
H3	C3	C2	H2	359.9	0.5
C3	C2	H2	C1	180.0	179.6
H2	C2	C3	H3	359.9	0.5
H2	C2	C1	H1	359.7	358.8