PDB Chemical Component C57

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C57

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O16 C15 1.224 1.217
C15 C2 1.516 1.472
C15 N17 1.487 1.347
C2 C3 1.400 1.404
C2 C1 1.381 1.399
C6 C1 1.383 1.365
C3 O13 1.373 1.357
C3 C4 1.390 1.384
O13 C14 1.428 1.429
C4 C5 1.379 1.390
C5 N10 1.410 1.390
C5 C6 1.394 1.394
N10 C12 1.459 1.469
N10 C11 1.452 1.470
C6 N7 1.389 1.480
N7 O9 1.387 1.218
N7 O8 1.218 1.219
N17 C18 1.464 1.466
C18 C05 1.526 1.530
C07 C06 1.485 1.545
C07 C08 1.493 1.550
C06 C05 1.488 1.540
C05 N09 1.453 1.479
N09 C10 1.453 1.469
N09 C08 1.445 1.485
C10 C13 1.532 1.529
C1 H1 1.080 1.080
N17 H17 1.000 0.970
C4 H4 1.080 1.080
C14 H141 1.100 1.090
C14 H142 1.100 1.090
C14 H143 1.100 1.090
C12 H121 1.100 1.090
C12 H122 1.100 1.090
C12 H123 1.100 1.089
C13 H131 1.100 1.091
C13 H132 1.100 1.090
C13 H133 1.100 1.091
C11 H111 1.099 1.090
C11 H112 1.100 1.090
C11 H113 1.100 1.090
C18 H181 1.100 1.090
C18 H182 1.100 1.089
C05 H05 1.100 1.090
C07 H071 1.100 1.090
C07 H072 1.100 1.090
C06 H061 1.100 1.090
C06 H062 1.100 1.090
C08 H081 1.100 1.089
C08 H082 1.100 1.090
C10 H101 1.100 1.090
C10 H102 1.101 1.090

Bond Angles for C57

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O16 C15 C2 117.9 120.0
O16 C15 N17 123.3 120.0
C2 C15 N17 118.7 120.0
C15 C2 C3 125.5 120.1
C15 C2 C1 116.5 120.1
C15 N17 C18 121.8 120.0
C15 N17 H17 119.1 120.0
C3 C2 C1 118.0 119.8
C2 C3 O13 123.2 120.2
C2 C3 C4 120.9 119.7
C2 C1 C6 120.8 120.1
C2 C1 H1 119.6 120.0
C5 C6 C1 121.3 120.3
N7 C6 C1 115.3 119.8
C6 C1 H1 119.6 119.9
O13 C3 C4 115.9 120.1
C3 O13 C14 117.1 117.0
C3 C4 C5 120.7 119.9
C3 C4 H4 119.6 120.1
O13 C14 H141 109.5 109.4
O13 C14 H142 109.5 109.5
O13 C14 H143 109.5 109.5
C4 C5 N10 117.2 119.9
C4 C5 C6 118.1 120.2
C5 C4 H4 119.6 120.1
N10 C5 C6 124.6 119.9
C5 N10 C12 122.9 111.0
C5 N10 C11 123.6 111.0
C5 C6 N7 123.4 119.8
C12 N10 C11 113.4 111.0
N10 C12 H121 109.5 109.5
N10 C12 H122 109.5 109.5
N10 C12 H123 109.5 109.5
N10 C11 H111 109.5 109.5
N10 C11 H112 109.5 109.5
N10 C11 H113 109.5 109.4
C6 N7 O9 116.7 120.0
C6 N7 O8 119.8 120.0
O9 N7 O8 123.4 120.0
N17 C18 C05 121.7 109.4
C18 N17 H17 119.1 120.0
N17 C18 H181 106.4 109.5
N17 C18 H182 106.3 109.5
C18 C05 C06 110.8 109.9
C18 C05 N09 116.3 110.0
C05 C18 H181 106.3 109.4
C05 C18 H182 106.3 109.5
C18 C05 H05 108.1 109.9
C06 C07 C08 105.1 102.9
C07 C06 C05 103.9 105.2
C06 C07 H071 110.5 110.8
C06 C07 H072 110.6 110.8
C07 C06 H061 110.9 110.3
C07 C06 H062 110.8 110.3
C07 C08 N09 107.3 103.2
C08 C07 H071 110.5 110.6
C08 C07 H072 110.5 110.7
C07 C08 H081 110.0 110.7
C07 C08 H082 110.0 110.7
C06 C05 N09 103.7 107.0
C06 C05 H05 108.6 109.8
C05 C06 H061 110.8 110.3
C05 C06 H062 110.8 110.3
C05 N09 C10 125.7 111.0
C05 N09 C08 106.2 105.8
N09 C05 H05 109.1 110.1
C10 N09 C08 113.8 111.0
N09 C10 C13 116.9 109.5
N09 C10 H101 107.6 109.4
N09 C10 H102 107.6 109.5
N09 C08 H081 110.0 110.7
N09 C08 H082 110.0 110.6
C10 C13 H131 109.5 109.5
C10 C13 H132 109.4 109.5
C10 C13 H133 109.5 109.5
C13 C10 H101 107.6 109.5
C13 C10 H102 107.6 109.5
H141 C14 H142 109.5 109.4
H141 C14 H143 109.5 109.5
H142 C14 H143 109.4 109.5
H121 C12 H122 109.5 109.5
H121 C12 H123 109.5 109.5
H122 C12 H123 109.5 109.5
H131 C13 H132 109.5 109.5
H131 C13 H133 109.5 109.4
H132 C13 H133 109.5 109.5
H111 C11 H112 109.5 109.5
H111 C11 H113 109.5 109.5
H112 C11 H113 109.5 109.5
H181 C18 H182 109.5 109.5
H071 C07 H072 109.5 110.8
H061 C06 H062 109.5 110.3
H081 C08 H082 109.5 110.7
H101 C10 H102 109.5 109.4

Torsion Angles for C57

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C15 O16 N17 176.8 180.2
O16 C15 C2 C3 188.0 0.1
O16 C15 C2 C1 8.0 179.7
O16 C15 N17 C18 4.5 359.9
O16 C15 N17 H17 184.6 180.0
O16 C15 C2 N17 183.0 179.8
C2 C15 N17 C18 187.7 179.7
C2 C15 N17 H17 7.8 359.9
C3 C2 C15 C1 180.0 180.4
C15 C2 C3 O13 0.1 359.9
C15 C2 C3 C4 180.1 180.0
C15 C2 C1 C6 180.1 179.7
C15 C2 C1 H1 0.1 0.1
O16 C15 N17 C2 176.8 180.2
N17 C15 C2 C3 5.0 180.3
N17 C15 C2 C1 185.0 359.9
C15 N17 C18 C05 312.0 186.8
C18 N17 C15 H17 180.0 179.9
C15 N17 C18 H181 73.6 306.8
C15 N17 C18 H182 190.3 66.8
C3 C2 C15 N17 5.0 180.3
C15 C2 C3 C1 180.0 179.7
C3 C2 C1 C6 0.1 359.4
C3 C2 C1 H1 180.1 179.7
O13 C3 C2 C4 179.9 179.9
C2 C3 O13 C14 164.0 180.0
C2 C3 C4 C5 359.2 359.9
C2 C3 C4 H4 179.2 179.9
C1 C2 C15 N17 185.0 359.9
C15 C2 C1 C3 180.0 180.3
C1 C2 C3 O13 180.1 180.3
C1 C2 C3 C4 0.1 0.4
C5 C6 C1 C2 0.4 0.6
N7 C6 C1 C2 179.7 180.2
C6 C1 C2 H1 180.0 179.7
C2 C1 C6 H1 180.0 180.3
C4 C5 C6 C1 359.0 359.7
N10 C5 C6 C1 181.4 179.7
C5 C6 C1 N7 180.7 180.4
C1 C6 N7 O9 264.1 0.4
C1 C6 N7 O8 81.2 180.3
O13 C3 C2 C1 180.1 180.3
C2 C3 O13 C4 180.1 180.1
O13 C3 C4 C5 179.3 180.0
O13 C3 C4 H4 359.2 0.0
C3 O13 C14 H141 180.0 60.1
C3 O13 C14 H142 300.0 180.0
C3 O13 C14 H143 60.0 300.1
C4 C3 C2 C1 0.1 0.4
C2 C3 C4 O13 180.0 179.9
C4 C3 O13 C14 343.9 359.9
C3 C4 C5 N10 179.0 180.0
C3 C4 C5 C6 1.2 0.1
C5 C4 C3 H4 180.0 180.0
C14 O13 C3 C4 343.9 359.9
H141 C14 O13 H142 240.0 240.0
H141 C14 O13 H143 120.0 120.0
H142 C14 O13 H143 240.0 240.0
C3 C4 C5 H4 180.0 180.0
N10 C5 C4 C6 177.8 180.0
C4 C5 N10 C12 12.9 300.0
C4 C5 N10 C11 192.5 64.0
C4 C5 C6 N7 179.7 180.1
C4 C5 N10 C6 182.4 180.0
N10 C5 C4 H4 359.0 0.0
N10 C5 C6 N7 2.1 0.1
C12 N10 C5 C11 180.4 236.0
C5 N10 C12 H121 180.0 60.0
C5 N10 C12 H122 300.0 180.0
C5 N10 C12 H123 60.0 300.0
C5 N10 C11 H111 180.0 60.0
C5 N10 C11 H112 300.0 180.0
C5 N10 C11 H113 60.0 300.0
C2 C1 C6 C5 0.4 0.6
N7 C6 C5 C1 180.7 180.4
C5 C6 C1 H1 180.4 180.3
C4 C5 C6 N10 177.6 180.0
C6 C5 C4 H4 181.2 180.0
C6 C5 N10 C12 190.5 120.0
C6 C5 N10 C11 10.1 243.9
C5 C6 N7 O9 83.5 180.0
C5 C6 N7 O8 260.6 359.9
C12 N10 C5 C6 190.5 120.0
C5 N10 C12 C11 179.7 124.0
C12 N10 C11 H111 359.7 184.0
C12 N10 C11 H112 119.7 304.0
C12 N10 C11 H113 239.7 64.0
H121 C12 N10 H122 240.0 240.0
H121 C12 N10 H123 120.0 120.0
H122 C12 N10 H123 240.0 240.0
C11 N10 C5 C6 10.1 243.9
C5 N10 C11 C12 180.3 236.0
C11 N10 C12 H121 0.3 296.1
C11 N10 C12 H122 120.4 56.0
C11 N10 C12 H123 240.3 176.0
H111 C11 N10 H112 240.0 240.0
H111 C11 N10 H113 120.0 120.0
H112 C11 N10 H113 240.0 240.0
C2 C1 C6 N7 179.7 180.2
C5 C6 N7 C1 179.3 179.6
N7 C6 C1 H1 359.7 359.9
O9 N7 C6 O8 182.9 180.1
O9 N7 C6 C1 264.1 0.4
C6 N7 O9 O8 177.0 179.9
O8 N7 C6 C1 81.2 180.3
C6 N7 O8 O9 183.1 180.1
C15 N17 C18 H17 180.0 180.1
N17 C18 C05 C06 175.1 183.5
N17 C18 C05 N09 57.0 65.9
C05 C18 N17 H181 238.3 240.0
C05 C18 N17 H182 121.7 120.0
N17 C18 C05 H05 293.9 304.5
H181 C18 N17 H182 243.4 240.0
C05 C18 N17 H17 131.9 6.7
N17 C18 C05 H181 121.7 120.0
N17 C18 C05 H182 238.3 240.0
C07 C06 C05 C18 271.2 239.4
C06 C05 C18 N09 118.1 117.6
C06 C05 C18 H05 241.1 239.0
C18 C05 C06 H061 152.0 120.5
C18 C05 C06 H062 30.3 358.3
C18 C05 N09 C10 223.9 265.2
C18 C05 N09 C08 87.3 144.6
N09 C05 C18 H05 123.1 121.4
H181 C18 C05 H182 116.6 120.0
C18 C05 C06 C07 271.2 239.4
C06 C07 C08 N09 4.2 37.4
C08 C07 C06 H071 240.7 241.7
C08 C07 C06 H072 119.3 118.3
C06 C07 C08 H081 123.8 155.8
C06 C07 C08 H082 244.5 279.0
C07 C06 C05 N09 36.7 358.8
C07 C06 C05 H05 152.6 118.4
C05 C06 C07 H061 240.9 241.0
C05 C06 C07 H062 119.1 118.9
H071 C07 C06 H072 238.6 236.6
H061 C06 C07 H062 238.2 237.9
C08 C07 C06 C05 335.1 338.0
C06 C07 C08 H071 119.3 118.4
C06 C07 C08 H072 240.7 241.6
C08 C07 C06 H061 94.2 97.0
C08 C07 C06 H062 216.0 219.1
C05 N09 C08 C07 18.9 320.9
C10 N09 C08 C07 236.5 200.3
N09 C08 C07 H081 240.3 241.5
N09 C08 C07 H082 119.6 118.4
H071 C07 C08 H072 121.4 123.2
H081 C08 C07 H082 239.3 236.8
C18 C05 C06 N09 234.5 240.6
C06 C05 C18 H181 53.3 63.6
C06 C05 C18 H182 296.7 303.5
C18 C05 C06 H05 118.6 121.1
C05 C06 C07 C08 335.1 338.0
C05 C06 C07 H071 94.4 96.3
C05 C06 C07 H072 215.8 219.7
C07 C06 C05 H061 119.1 119.0
C07 C06 C05 H062 240.9 241.1
C06 C05 N09 C10 102.1 145.8
C06 C05 N09 C08 325.5 25.3
N09 C05 C06 H05 244.1 240.5
H061 C06 C05 H062 121.8 122.1
C18 C05 N09 C06 121.9 119.4
N09 C05 C18 H181 295.3 306.0
N09 C05 C18 H182 178.6 185.9
C18 C05 N09 H05 237.4 238.7
C07 C08 N09 C05 18.9 320.9
C06 C05 N09 H05 115.6 119.4
N09 C05 C06 H061 277.5 239.9
N09 C05 C06 H062 155.7 117.8
C10 N09 C05 C08 136.6 120.6
C05 N09 C10 C13 84.6 175.7
C05 N09 C10 H101 205.7 295.8
C05 N09 C10 H102 323.6 55.7
C05 N09 C08 H081 259.3 202.4
C05 N09 C08 H082 138.6 79.3
C07 C08 N09 C10 236.5 200.3
C05 N09 C10 C08 226.1 242.5
C10 N09 C05 H05 346.5 26.5
C10 N09 C08 H081 116.8 81.8
C10 N09 C08 H082 356.2 318.7
N09 C10 C13 H131 180.0 299.9
N09 C10 C13 H132 300.0 60.0
N09 C10 C13 H133 60.0 180.0
C13 C10 N09 H101 238.9 240.0
C13 C10 N09 H102 121.1 120.0
H101 C10 N09 H102 242.1 240.1
N09 C08 C07 H071 244.9 279.0
N09 C08 C07 H072 123.5 155.8
C07 C08 N09 H081 119.7 118.5
C07 C08 N09 H082 240.4 241.6
C05 N09 C08 C10 142.4 120.6
C08 N09 C05 H05 209.9 265.9
C08 N09 C10 C13 218.5 293.2
C08 N09 C10 H101 339.6 53.2
C08 N09 C10 H102 97.4 173.2
H081 C08 N09 H082 120.7 123.1
C13 C10 N09 C08 218.5 293.2
N09 C10 C13 H101 121.1 120.0
N09 C10 C13 H102 238.9 240.0
H131 C13 C10 H132 240.0 239.9
H131 C13 C10 H133 120.0 119.9
H132 C13 C10 H133 240.0 240.0
H101 C10 C13 H102 117.9 120.0
C2 C1 H1 C6 180.0 179.7
C15 N17 H17 C18 180.0 179.9
H17 N17 C18 C05 131.9 6.7
H17 N17 C18 H181 253.6 126.7
H17 N17 C18 H182 10.3 246.7
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 N10 359.0 0.0
H4 C4 C5 C6 181.2 180.0
O13 C14 H141 H142 120.0 120.0
O13 C14 H141 H143 240.0 240.0
H142 C14 H141 H143 120.0 120.0
O13 C14 H142 H141 240.0 240.1
O13 C14 H142 H143 120.0 120.0
H141 C14 H142 H143 240.0 240.0
O13 C14 H143 H141 120.0 120.0
O13 C14 H143 H142 240.0 240.0
H141 C14 H143 H142 120.0 120.0
H121 C12 N10 C11 0.3 296.1
N10 C12 H121 H122 120.0 120.0
N10 C12 H121 H123 240.0 240.0
H122 C12 H121 H123 120.0 120.0
H122 C12 N10 C11 120.4 56.0
N10 C12 H122 H121 240.0 240.0
N10 C12 H122 H123 120.0 120.0
H121 C12 H122 H123 240.0 240.0
H123 C12 N10 C11 240.3 176.0
N10 C12 H123 H121 120.0 120.0
N10 C12 H123 H122 240.0 240.0
H121 C12 H123 H122 120.0 120.0
C10 C13 H131 H132 120.0 120.1
C10 C13 H131 H133 240.0 240.0
H131 C13 C10 H101 58.9 180.0
H131 C13 C10 H102 301.1 59.9
H132 C13 H131 H133 120.0 120.0
C10 C13 H132 H131 240.0 239.9
C10 C13 H132 H133 120.0 120.0
H132 C13 C10 H101 178.9 300.0
H132 C13 C10 H102 61.1 180.0
H131 C13 H132 H133 240.0 240.1
C10 C13 H133 H131 120.0 120.0
C10 C13 H133 H132 240.0 240.0
H133 C13 C10 H101 298.9 60.0
H133 C13 C10 H102 181.1 300.0
H131 C13 H133 H132 120.0 120.0
N10 C11 H111 H112 120.0 120.0
N10 C11 H111 H113 240.0 240.0
H112 C11 H111 H113 120.0 120.0
N10 C11 H112 H111 240.0 240.0
N10 C11 H112 H113 120.0 120.0
H111 C11 H112 H113 240.0 240.0
N10 C11 H113 H111 120.0 120.0
N10 C11 H113 H112 240.0 240.0
H111 C11 H113 H112 120.0 120.0
N17 C18 H181 C05 229.0 240.0
H181 C18 N17 H17 253.6 126.7
N17 C18 H181 H182 114.5 120.0
H181 C18 C05 C06 53.3 63.6
H181 C18 C05 N09 295.3 306.0
C05 C18 H181 H182 245.5 240.0
H181 C18 C05 H05 172.2 184.6
N17 C18 H182 C05 131.0 120.0
H182 C18 N17 H17 10.3 246.7
N17 C18 H182 H181 245.5 240.0
H182 C18 C05 C06 296.7 303.5
H182 C18 C05 N09 178.6 185.9
C05 C18 H182 H181 114.5 120.0
H182 C18 C05 H05 55.6 64.6
C18 C05 H05 C06 239.8 238.9
C18 C05 H05 N09 127.3 121.3
H05 C05 C18 H181 172.2 184.6
H05 C05 C18 H182 55.6 64.6
C06 C05 H05 N09 247.6 242.4
H05 C05 C06 H061 33.5 359.4
H05 C05 C06 H062 271.7 237.3
H05 C05 N09 C10 346.5 26.5
H05 C05 N09 C08 209.9 265.9
C06 C07 H071 C08 244.0 246.5
H071 C07 C06 C05 94.4 96.3
C06 C07 H071 H072 122.0 123.4
H071 C07 C06 H061 213.5 215.3
H071 C07 C06 H062 335.3 337.4
H071 C07 C08 N09 244.9 279.0
C08 C07 H071 H072 238.0 236.8
H071 C07 C08 H081 4.5 37.5
H071 C07 C08 H082 125.3 160.6
C06 C07 H072 C08 116.0 113.5
H072 C07 C06 C05 215.8 219.7
C06 C07 H072 H071 238.0 236.6
H072 C07 C06 H061 334.9 338.7
H072 C07 C06 H062 96.7 100.8
H072 C07 C08 N09 123.5 155.8
C08 C07 H072 H071 122.0 123.1
H072 C07 C08 H081 243.2 274.2
H072 C07 C08 H082 3.9 37.4
H061 C06 C07 C08 94.2 97.0
C07 C06 H061 C05 245.2 244.2
H061 C06 C07 H071 213.5 215.3
H061 C06 C07 H072 334.9 338.7
C07 C06 H061 H062 122.6 122.1
H061 C06 C05 N09 277.5 239.9
H061 C06 C05 H05 33.5 359.4
C05 C06 H061 H062 237.4 237.9
H062 C06 C07 C08 216.0 219.1
C07 C06 H062 C05 114.8 115.7
H062 C06 C07 H071 335.3 337.4
H062 C06 C07 H072 96.7 100.8
C07 C06 H062 H061 237.4 237.9
H062 C06 C05 N09 155.7 117.8
H062 C06 C05 H05 271.7 237.3
C05 C06 H062 H061 122.6 122.1
C07 C08 H081 N09 242.0 246.2
H081 C08 C07 H071 4.5 37.5
H081 C08 C07 H072 243.2 274.2
C07 C08 H081 H082 121.0 123.2
N09 C08 H081 H082 239.0 237.0
C07 C08 H082 N09 118.0 113.8
H082 C08 C07 H071 125.3 160.6
H082 C08 C07 H072 3.9 37.4
C07 C08 H082 H081 239.0 236.8
N09 C08 H082 H081 121.0 123.0
H101 C10 N09 C08 339.6 53.2
N09 C10 H101 C13 233.3 240.0
N09 C10 H101 H102 116.6 119.9
H101 C10 C13 H131 58.9 180.0
H101 C10 C13 H132 178.9 300.0
H101 C10 C13 H133 298.9 60.0
C13 C10 H101 H102 243.4 239.9
H102 C10 N09 C08 97.4 173.2
N09 C10 H102 C13 126.7 120.0
N09 C10 H102 H101 243.3 240.1
H102 C10 C13 H131 301.1 59.9
H102 C10 C13 H132 61.1 180.0
H102 C10 C13 H133 181.1 300.0
C13 C10 H102 H101 116.6 120.1