PDB Chemical Component C53

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C53

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	C3	1.418	1.384
C2	C1	1.403	1.398
C2	H2	1.080	1.079
C3	C4	1.378	1.388
C3	H3	1.080	1.080
C4	C5	1.405	1.385
C4	H4	1.080	1.079
C5	H5	1.079	1.080
C5	N1	1.363	1.316
N1	C1	1.376	1.331
C1	C6	1.414	1.471
C6	H6C1	1.080	1.080
C6	C7	1.413	1.355
C7	S1	1.680	1.773
C7	C8	1.395	1.471
S1	C9	1.626	1.772
C8	O1	1.224	1.216
C8	N2	1.386	1.323
N2	H2N	1.000	0.970
N2	C9	1.372	1.371
C9	N3	1.291	1.303
N3	H3N1	1.000	0.970

Bond Angles for C53

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	C1	119.4	119.0
C3	C2	H2	120.3	120.5
C2	C3	C4	119.5	118.6
C2	C3	H3	120.2	120.7
C1	C2	H2	120.3	120.5
C2	C1	N1	119.8	120.5
C2	C1	C6	121.2	119.8
C4	C3	H3	120.3	120.7
C3	C4	C5	119.8	119.4
C3	C4	H4	120.1	120.3
C5	C4	H4	120.1	120.3
C4	C5	H5	119.7	119.5
C4	C5	N1	120.6	121.0
N1	C5	H5	119.7	119.5
C5	N1	C1	120.9	121.6
N1	C1	C6	118.6	119.7
C1	C6	H6C1	117.6	120.0
C1	C6	C7	124.8	120.0
C7	C6	H6C1	117.6	120.0
C6	C7	S1	122.8	127.7
C6	C7	C8	126.3	127.7
S1	C7	C8	110.6	104.6
C7	S1	C9	93.5	94.8
C7	C8	O1	124.6	122.4
C7	C8	N2	111.0	115.2
S1	C9	N2	112.6	106.8
S1	C9	N3	123.0	126.6
O1	C8	N2	124.4	122.4
C8	N2	H2N	123.8	120.7
C8	N2	C9	112.3	118.7
C9	N2	H2N	123.8	120.6
N2	C9	N3	124.4	126.6
C9	N3	H3N1	105.7	120.0

Torsion Angles for C53

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C1	C2	C3	H2	180.0	180.4
C3	C2	C1	N1	357.0	359.9
C3	C2	C1	C6	184.8	180.0
C4	C3	C2	H3	180.0	180.1
C2	C3	C4	C5	0.2	359.9
C2	C3	C4	H4	180.2	180.0
C3	C2	C1	H2	180.0	179.6
C1	C2	C3	C4	1.3	0.1
C1	C2	C3	H3	181.3	180.0
C5	N1	C1	C2	3.2	0.1
N1	C1	C2	C6	172.2	179.9
C2	C1	C6	H6C1	158.2	353.8
C2	C1	C6	C7	338.2	173.9
C3	C2	H2	C1	180.0	180.4
H2	C2	C3	C4	181.4	179.7
H2	C2	C3	H3	1.3	359.6
H2	C2	C1	N1	176.9	180.2
H2	C2	C1	C6	4.8	0.3
C4	C3	C2	C1	1.3	0.1
C4	C3	C2	H2	181.4	179.7
C2	C3	C4	H3	180.0	179.9
C5	C4	C3	H4	180.0	180.0
C3	C4	C5	H5	179.9	180.0
C3	C4	C5	N1	359.9	0.1
H3	C3	C2	C1	181.3	180.0
H3	C3	C2	H2	1.3	359.6
C2	C3	H3	C4	180.0	180.1
H3	C3	C4	C5	180.2	180.0
H3	C3	C4	H4	0.3	0.1
C5	C4	C3	H3	180.2	180.0
C3	C4	C5	H4	180.0	180.0
N1	C5	C4	H5	180.0	180.1
C4	C5	N1	C1	358.3	359.9
H4	C4	C3	H3	0.3	0.1
C3	C4	H4	C5	180.0	180.0
H4	C4	C5	H5	359.9	360.0
H4	C4	C5	N1	179.9	180.1
H5	C5	C4	H4	359.9	360.0
C4	C5	H5	N1	180.0	180.1
H5	C5	N1	C1	178.4	180.0
C2	C1	N1	C5	3.2	0.1
N1	C5	C4	H4	179.9	180.1
C4	C5	N1	H5	180.0	179.9
C5	N1	C1	C6	175.6	180.1
N1	C1	C2	H2	176.9	180.2
C2	C1	N1	C6	187.6	180.1
C1	N1	C5	H5	178.4	180.0
N1	C1	C6	H6C1	346.0	173.9
N1	C1	C6	C7	166.0	353.9
C6	C1	C2	H2	4.8	0.3
C2	C1	C6	N1	172.2	179.9
C7	C6	C1	H6C1	180.0	180.0
C1	C6	C7	S1	165.5	163.9
C1	C6	C7	C8	337.9	343.5
C1	C6	H6C1	C7	180.0	180.0
H6C1	C6	C7	S1	345.5	343.9
H6C1	C6	C7	C8	157.9	163.6
C1	C6	C7	H6C1	180.0	180.0
S1	C7	C6	C8	187.6	180.3
C6	C7	S1	C9	174.7	179.9
C6	C7	C8	O1	7.2	0.1
C6	C7	C8	N2	184.6	180.1
S1	C7	C6	H6C1	345.5	343.9
C6	C7	S1	C8	173.4	179.7
S1	C7	C8	O1	180.4	179.8
S1	C7	C8	N2	357.8	359.8
C7	S1	C9	N2	0.1	359.8
C7	S1	C9	N3	178.2	180.0
C8	C7	C6	H6C1	157.9	163.6
C6	C7	C8	S1	186.8	180.3
C8	C7	S1	C9	1.2	0.2
O1	C8	C7	N2	182.6	180.0
C7	C8	N2	H2N	182.3	180.0
C7	C8	N2	C9	2.3	0.1
C9	S1	C7	C8	1.2	0.2
C8	N2	C9	S1	358.6	0.1
S1	C9	N2	H2N	178.6	180.2
N2	C9	S1	N3	181.9	179.8
S1	C9	N3	H3N1	1.0	0.0
C7	C8	O1	N2	177.1	180.0
O1	C8	N2	H2N	359.8	0.0
O1	C8	N2	C9	179.7	180.1
C7	C8	N2	O1	182.6	180.0
S1	C9	N2	C8	358.6	0.1
C9	N2	C8	H2N	180.0	180.1
C8	N2	C9	N3	180.5	179.9
C8	N2	H2N	C9	180.0	180.1
H2N	N2	C9	N3	0.5	0.0
S1	C9	N2	N3	178.1	180.2
C8	N2	C9	H2N	180.0	179.9
N2	C9	N3	H3N1	178.9	180.3
S1	C9	N3	N2	182.1	179.8
N3	C9	N2	H2N	0.5	0.0