PDB Chemical Component C48

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C48

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C9 1.208 1.212
O2 C11 1.226 1.207
O3 C12 1.205 1.213
O4 C21 1.225 1.213
N5 C12 1.338 1.348
N5 C13 1.457 1.465
N5 HN5 1.021 0.971
N6 C21 1.338 1.347
N6 C22 1.473 1.465
N6 C23 1.467 1.465
N7 C9 1.347 1.348
N7 C24 1.482 1.465
N7 HN7 1.019 0.971
N8 C26 1.377 1.318
N8 C30 1.371 1.318
C9 C10 1.535 1.506
C10 C11 1.529 1.507
C10 H101 1.115 1.089
C10 H102 1.115 1.090
C11 C12 1.513 1.490
C13 C14 1.570 1.529
C13 C21 1.553 1.507
C13 H13 1.114 1.090
C14 C15 1.532 1.506
C14 H141 1.115 1.090
C14 H142 1.116 1.090
C15 C16 1.393 1.383
C15 C20 1.434 1.382
C16 C17 1.431 1.382
C16 H16 1.103 1.080
C17 C18 1.398 1.382
C17 H17 1.102 1.081
C18 C19 1.401 1.382
C18 H18 1.102 1.081
C19 C20 1.432 1.383
C19 H19 1.103 1.080
C20 H20 1.104 1.081
C22 H221 1.114 1.090
C22 H222 1.115 1.090
C22 H223 1.115 1.090
C23 H231 1.114 1.090
C23 H232 1.115 1.090
C23 H233 1.116 1.090
C24 C25 1.477 1.530
C24 H241 1.115 1.089
C24 H242 1.115 1.089
C25 C26 1.507 1.507
C25 H251 1.115 1.090
C25 H252 1.115 1.090
C26 C27 1.414 1.381
C27 C28 1.423 1.387
C27 H27 1.103 1.080
C28 C29 1.373 1.386
C28 H28 1.104 1.080
C29 C30 1.417 1.381
C29 H29 1.104 1.080
C30 H30 1.103 1.081

Bond Angles for C48

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C9 N7 126.6 119.9
O1 C9 C10 111.8 120.1
O2 C11 C10 112.0 120.0
O2 C11 C12 102.3 120.0
O3 C12 N5 127.0 119.9
O3 C12 C11 113.6 120.1
O4 C21 N6 122.4 120.0
O4 C21 C13 117.2 120.0
C12 N5 C13 118.6 120.1
C12 N5 HN5 116.6 120.0
N5 C12 C11 119.4 120.0
C13 N5 HN5 124.8 120.0
N5 C13 C14 112.4 109.5
N5 C13 C21 106.4 109.4
N5 C13 H13 110.6 109.5
C21 N6 C22 127.3 120.0
C21 N6 C23 118.8 120.0
N6 C21 C13 120.4 120.0
C22 N6 C23 113.9 120.0
N6 C22 H221 127.3 109.5
N6 C22 H222 105.9 109.5
N6 C22 H223 106.0 109.5
N6 C23 H231 118.8 109.5
N6 C23 H232 108.8 109.4
N6 C23 H233 108.8 109.4
C9 N7 C24 124.2 120.0
C9 N7 HN7 112.8 120.0
N7 C9 C10 107.9 120.0
C24 N7 HN7 123.0 120.0
N7 C24 C25 113.9 109.5
N7 C24 H241 110.7 109.5
N7 C24 H242 110.6 109.4
C26 N8 C30 118.0 121.7
N8 C26 C25 115.5 119.6
N8 C26 C27 123.3 120.8
N8 C30 C29 122.3 120.8
N8 C30 H30 117.2 119.6
C9 C10 C11 104.0 109.5
C9 C10 H101 114.2 109.5
C9 C10 H102 114.2 109.5
C11 C10 H101 114.3 109.5
C11 C10 H102 114.3 109.4
C10 C11 C12 118.4 120.0
H101 C10 H102 96.2 109.4
C14 C13 C21 112.4 109.4
C14 C13 H13 104.4 109.5
C13 C14 C15 115.0 109.4
C13 C14 H141 110.2 109.5
C13 C14 H142 110.2 109.5
C21 C13 H13 110.7 109.4
C15 C14 H141 110.2 109.4
C15 C14 H142 110.2 109.5
C14 C15 C16 121.8 120.0
C14 C15 C20 118.4 120.0
H141 C14 H142 100.0 109.5
C16 C15 C20 119.8 120.0
C15 C16 C17 119.6 120.0
C15 C16 H16 118.8 120.0
C15 C20 C19 119.8 120.1
C15 C20 H20 120.2 120.0
C17 C16 H16 121.6 120.0
C16 C17 C18 120.8 120.0
C16 C17 H17 120.8 120.0
C18 C17 H17 118.4 120.0
C17 C18 C19 120.3 120.0
C17 C18 H18 119.7 120.0
C19 C18 H18 119.9 120.0
C18 C19 C20 119.6 119.9
C18 C19 H19 119.2 120.0
C20 C19 H19 121.2 120.0
C19 C20 H20 120.0 119.9
H221 C22 H222 106.0 109.4
H221 C22 H223 106.0 109.4
H222 C22 H223 103.4 109.5
H231 C23 H232 108.9 109.5
H231 C23 H233 108.9 109.5
H232 C23 H233 101.2 109.5
C25 C24 H241 110.5 109.5
C25 C24 H242 110.6 109.5
C24 C25 C26 112.3 109.5
C24 C25 H251 111.2 109.5
C24 C25 H252 111.2 109.5
H241 C24 H242 99.7 109.5
C26 C25 H251 111.1 109.5
C26 C25 H252 111.1 109.4
C25 C26 C27 121.1 119.6
H251 C25 H252 99.2 109.5
C26 C27 C28 116.3 119.2
C26 C27 H27 121.6 120.5
C28 C27 H27 122.1 120.3
C27 C28 C29 121.7 118.4
C27 C28 H28 121.0 120.8
C29 C28 H28 117.3 120.8
C28 C29 C30 118.4 119.1
C28 C29 H29 119.3 120.4
C30 C29 H29 122.3 120.4
C29 C30 H30 120.6 119.6

Torsion Angles for C48

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C9 N7 C24 1.3 360.0
O1 C9 N7 HN7 181.3 180.0
N7 C9 O1 C10 135.2 180.0
O1 C9 C10 C11 254.4 360.0
O1 C9 C10 H101 19.8 239.9
O1 C9 C10 H102 129.2 120.0
O3 C12 C11 O2 135.0 180.0
N5 C12 C11 O2 313.3 360.0
C9 C10 C11 O2 296.7 0.0
O2 C11 C10 H101 171.4 120.1
O2 C11 C10 H102 61.9 240.0
C10 C11 O2 C12 232.3 180.0
O2 C11 C12 O3 135.0 180.0
O3 C12 N5 C13 0.0 0.1
O3 C12 N5 HN5 180.0 180.0
N5 C12 O3 C11 181.9 180.0
C10 C11 C12 O3 258.6 360.0
N5 C13 C21 O4 308.3 138.0
O4 C21 N6 C22 179.9 185.1
O4 C21 N6 C23 359.9 5.2
N6 C21 O4 C13 180.0 180.0
C14 C13 C21 O4 71.7 258.0
O4 C21 C13 H13 188.1 18.0
O2 C11 C12 N5 313.3 360.0
O3 C12 N5 C11 178.0 180.0
C13 N5 C12 HN5 180.0 180.0
C12 N5 C13 C14 113.5 158.4
C12 N5 C13 C21 236.9 278.4
C12 N5 C13 H13 357.2 38.3
C10 C11 C12 N5 76.8 180.0
O4 C21 C13 N5 308.3 138.0
C12 N5 C13 HN5 180.0 180.0
C13 N5 C12 C11 182.1 180.0
N6 C21 C13 N5 128.3 318.0
C14 C13 N5 C21 236.6 240.0
C14 C13 N5 H13 116.3 120.1
N5 C13 C14 C15 175.4 300.0
N5 C13 C14 H141 300.7 59.9
N5 C13 C14 H142 50.1 180.0
C21 C13 N5 H13 239.7 240.1
C12 N5 HN5 C13 180.0 180.0
HN5 N5 C12 C11 2.0 360.0
HN5 N5 C13 C14 293.6 338.4
HN5 N5 C13 C21 57.0 98.4
HN5 N5 C13 H13 177.3 218.4
O4 C21 N6 C13 180.0 180.0
N5 C13 C21 N6 128.3 318.0
C22 N6 C21 C23 180.0 180.0
C21 N6 C22 H221 180.0 185.4
C21 N6 C22 H222 305.3 305.4
C21 N6 C22 H223 54.7 65.4
C21 N6 C23 H231 180.0 5.1
C21 N6 C23 H232 305.3 125.1
C21 N6 C23 H233 54.7 245.1
C14 C13 C21 N6 251.8 78.1
N6 C21 C13 H13 8.1 198.0
C21 N6 C22 C23 180.0 180.0
C22 N6 C21 C13 359.9 5.1
C22 N6 C23 H231 0.0 185.1
C22 N6 C23 H232 125.3 305.1
C22 N6 C23 H233 234.7 65.1
H221 C22 N6 H222 234.7 240.0
H221 C22 N6 H223 125.3 120.0
H222 C22 N6 H223 250.6 240.0
C21 N6 C23 C22 180.0 180.0
C23 N6 C21 C13 179.9 185.2
C23 N6 C22 H221 360.0 5.3
C23 N6 C22 H222 125.2 125.3
C23 N6 C22 H223 234.7 245.3
H231 C23 N6 H232 234.7 240.0
H231 C23 N6 H233 125.3 120.0
H232 C23 N6 H233 250.6 240.0
O1 C9 N7 C10 223.5 180.0
C24 N7 C9 HN7 180.0 179.9
C9 N7 C24 C25 103.8 180.0
C9 N7 C24 H241 229.1 300.0
C9 N7 C24 H242 338.6 60.1
N7 C9 C10 C11 110.9 180.0
N7 C9 C10 H101 236.2 59.9
N7 C9 C10 H102 345.6 299.9
C9 N7 C24 HN7 180.0 180.1
C24 N7 C9 C10 137.8 180.0
C25 C24 N7 H241 234.7 240.0
C25 C24 N7 H242 125.3 120.0
N7 C24 C25 C26 179.3 180.0
N7 C24 C25 H251 304.6 300.0
N7 C24 C25 H252 54.1 60.1
H241 C24 N7 H242 250.5 240.0
C9 N7 HN7 C24 180.0 179.9
HN7 N7 C9 C10 317.8 0.0
HN7 N7 C24 C25 283.8 360.0
HN7 N7 C24 H241 49.1 120.0
HN7 N7 C24 H242 158.6 240.0
C26 N8 C30 C29 0.3 0.5
C26 N8 C30 H30 180.3 180.3
C24 C25 C26 N8 78.3 299.7
N8 C26 C25 H251 313.0 179.7
N8 C26 C25 H252 203.6 59.7
C25 C26 N8 C27 180.4 180.3
N8 C26 C27 C28 0.1 0.3
N8 C26 C27 H27 180.1 180.2
C30 N8 C26 C25 180.2 179.7
C30 N8 C26 C27 359.8 359.5
C28 C29 C30 N8 359.6 359.7
N8 C30 C29 H29 179.6 179.7
C29 C30 N8 H30 180.0 180.2
O1 C9 C10 N7 143.5 180.0
O2 C11 C10 C9 296.7 0.0
C10 C9 N7 C24 137.8 180.0
C10 C9 N7 HN7 317.8 0.0
C11 C10 C9 H101 234.7 120.0
C11 C10 C9 H102 125.3 240.0
C9 C10 C11 C12 178.1 180.0
H101 C10 C9 H102 250.6 120.0
O2 C11 C10 C12 118.6 180.0
O3 C12 C11 C10 258.6 360.0
N5 C12 C11 C10 76.8 180.0
C9 C10 C11 H101 125.2 239.9
C9 C10 C11 H102 234.8 120.0
H101 C10 C11 H102 109.5 240.0
C9 C10 H101 C11 240.3 120.0
C9 C10 H101 H102 120.1 240.0
C11 C10 H101 H102 239.8 120.0
H101 C10 C11 C12 52.9 300.1
C9 C10 H102 C11 119.6 240.0
C9 C10 H102 H101 239.9 120.0
C11 C10 H102 H101 120.3 240.0
H102 C10 C11 C12 303.4 60.0
O2 C11 C12 C10 236.5 180.0
O3 C12 C11 N5 181.8 180.0
C11 C12 N5 C13 182.1 180.0
C11 C12 N5 HN5 2.0 360.0
C12 C11 C10 H101 52.9 300.1
C12 C11 C10 H102 303.4 60.0
O4 C21 C13 C14 71.7 258.0
C14 C13 N5 HN5 293.6 338.4
N5 C13 C14 C21 120.0 120.0
N5 C13 C14 H13 240.1 239.9
N6 C21 C13 C14 251.8 78.1
C21 C13 C14 H13 120.1 119.9
C15 C14 C13 H141 234.7 240.1
C15 C14 C13 H142 125.3 120.0
C13 C14 C15 C16 76.2 90.0
C13 C14 C15 C20 256.4 269.7
H141 C14 C13 H142 250.6 240.0
O4 C21 C13 N6 180.0 180.0
C21 C13 N5 HN5 57.0 98.4
N5 C13 C21 C14 236.6 240.0
N5 C13 C21 H13 120.2 120.0
C13 C21 N6 C22 359.9 5.1
C13 C21 N6 C23 179.9 185.2
C14 C13 C21 H13 243.7 240.0
C21 C13 C14 C15 55.4 180.0
C21 C13 C14 H141 180.8 299.9
C21 C13 C14 H142 290.1 60.0
H13 C13 N5 HN5 177.3 218.4
N5 C13 H13 C14 121.2 120.1
N5 C13 H13 C21 242.3 240.0
C14 C13 H13 C21 121.2 119.9
H13 C13 C14 C15 295.4 60.1
H13 C13 C14 H141 60.7 180.0
H13 C13 C14 H142 170.0 300.0
C15 C14 C13 C21 55.4 180.0
C15 C14 C13 H13 295.4 60.1
C13 C14 C15 H141 125.3 120.0
C13 C14 C15 H142 234.7 240.0
H141 C14 C15 H142 109.4 120.0
C16 C15 C14 C20 179.8 180.3
C14 C15 C16 C17 180.2 180.0
C14 C15 C16 H16 0.2 360.0
C14 C15 C20 C19 179.9 179.8
C14 C15 C20 H20 359.9 0.3
H141 C14 C13 C21 180.8 299.9
H141 C14 C13 H13 60.7 180.0
C13 C14 H141 C15 232.0 240.1
C13 C14 H141 H142 116.0 120.0
C15 C14 H141 H142 244.0 240.0
H141 C14 C15 C16 310.9 330.0
H141 C14 C15 C20 131.1 149.7
H142 C14 C13 C21 290.1 60.0
H142 C14 C13 H13 170.0 300.0
C13 C14 H142 C15 128.0 120.0
C13 C14 H142 H141 244.0 240.0
C15 C14 H142 H141 116.0 120.0
H142 C14 C15 C16 201.5 210.0
H142 C14 C15 C20 21.7 29.7
C16 C15 C14 H141 310.9 330.0
C16 C15 C14 H142 201.5 210.0
C14 C15 C16 C20 180.2 179.7
C16 C15 C20 C19 0.1 359.5
C16 C15 C20 H20 180.1 179.9
C17 C16 C15 H16 180.0 180.0
C15 C16 C17 C18 0.0 360.0
C15 C16 C17 H17 180.0 180.0
C20 C15 C14 H141 131.1 149.7
C20 C15 C14 H142 21.7 29.7
C14 C15 C20 C16 179.8 180.3
C20 C15 C16 C17 359.9 0.3
C20 C15 C16 H16 180.0 180.3
C18 C19 C20 C15 359.9 0.4
C15 C20 C19 H19 179.9 180.3
C19 C20 C15 H20 180.0 179.5
C17 C16 C15 C20 359.9 0.3
C15 C16 C17 H16 180.0 180.0
C18 C17 C16 H17 180.0 180.0
C16 C17 C18 C19 360.0 360.0
C16 C17 C18 H18 180.0 179.9
H16 C16 C15 C20 180.0 180.3
C15 C16 H16 C17 180.0 180.0
H16 C16 C17 C18 180.0 180.0
H16 C16 C17 H17 360.0 360.0
C18 C17 C16 H16 180.0 180.0
C16 C17 C18 H17 180.0 180.0
C19 C18 C17 H18 180.0 180.0
C17 C18 C19 C20 0.0 359.8
C17 C18 C19 H19 180.1 180.0
H17 C17 C16 H16 360.0 360.0
C16 C17 H17 C18 180.0 180.0
H17 C17 C18 C19 180.0 180.0
H17 C17 C18 H18 0.0 360.0
C15 C20 C19 C18 359.9 0.4
C19 C18 C17 H17 180.0 180.0
C17 C18 C19 H18 180.0 180.0
C20 C19 C18 H19 180.0 179.9
C18 C19 C20 H20 179.9 180.0
H18 C18 C17 H17 0.0 360.0
C17 C18 H18 C19 180.0 180.0
H18 C18 C19 C20 180.0 179.9
H18 C18 C19 H19 0.0 0.0
C15 C20 C19 H20 180.0 180.5
C20 C19 C18 H18 180.0 179.9
C18 C19 C20 H19 180.0 180.1
H19 C19 C18 H18 0.0 0.0
C18 C19 H19 C20 180.0 179.8
H19 C19 C20 H20 359.9 359.8
C15 C20 H20 C19 180.0 179.5
H20 C20 C19 H19 359.9 359.8
H221 C22 N6 C23 360.0 5.3
N6 C22 H221 H222 125.3 120.0
N6 C22 H221 H223 234.7 240.0
H222 C22 H221 H223 109.5 120.0
H222 C22 N6 C23 125.2 125.3
N6 C22 H222 H221 222.5 240.0
N6 C22 H222 H223 111.2 120.0
H221 C22 H222 H223 248.7 240.1
H223 C22 N6 C23 234.7 245.3
N6 C22 H223 H221 137.5 120.1
N6 C22 H223 H222 248.8 240.0
H221 C22 H223 H222 111.3 119.9
N6 C23 H231 H232 125.3 120.0
N6 C23 H231 H233 234.7 240.0
H232 C23 H231 H233 109.5 120.0
N6 C23 H232 H231 229.1 240.0
N6 C23 H232 H233 114.5 120.0
H231 C23 H232 H233 245.4 240.0
N6 C23 H233 H231 130.9 120.0
N6 C23 H233 H232 245.5 240.0
H231 C23 H233 H232 114.6 120.0
C25 C24 N7 HN7 283.8 360.0
N7 C24 C25 H241 125.3 120.0
N7 C24 C25 H242 234.7 240.1
N8 C26 C25 C24 78.3 299.7
H241 C24 C25 H242 109.4 120.1
C26 C25 C24 H251 234.7 240.0
C26 C25 C24 H252 125.2 120.0
C24 C25 C26 C27 258.7 120.0
H251 C25 C24 H252 250.5 240.0
H241 C24 N7 HN7 49.1 120.0
N7 C24 H241 C25 232.9 240.0
N7 C24 H241 H242 116.5 120.0
C25 C24 H241 H242 243.6 240.0
H241 C24 C25 C26 54.0 60.0
H241 C24 C25 H251 179.3 180.0
H241 C24 C25 H252 288.8 300.1
H242 C24 N7 HN7 158.6 240.0
N7 C24 H242 C25 127.1 120.0
N7 C24 H242 H241 243.5 240.0
C25 C24 H242 H241 116.4 120.0
H242 C24 C25 C26 304.6 299.9
H242 C24 C25 H251 69.9 59.9
H242 C24 C25 H252 179.4 180.0
C25 C26 N8 C30 180.2 179.7
N8 C26 C25 C27 179.6 179.7
C26 C25 C24 H241 54.0 60.0
C26 C25 C24 H242 304.6 299.9
C24 C25 C26 H251 125.3 120.0
C24 C25 C26 H252 234.7 240.0
H251 C25 C26 H252 109.5 120.0
C25 C26 C27 C28 179.7 180.0
C25 C26 C27 H27 359.8 359.9
H251 C25 C24 H241 179.3 180.0
H251 C25 C24 H242 69.9 59.9
C24 C25 H251 C26 234.1 240.0
C24 C25 H251 H252 117.1 120.0
C26 C25 H251 H252 243.0 240.0
H251 C25 C26 C27 133.4 360.0
H252 C25 C24 H241 288.8 300.1
H252 C25 C24 H242 179.4 180.0
C24 C25 H252 C26 125.9 120.0
C24 C25 H252 H251 242.9 240.0
C26 C25 H252 H251 117.0 120.0
H252 C25 C26 C27 23.9 240.0
C27 C26 N8 C30 359.8 359.5
N8 C26 C27 C25 180.4 180.3
C27 C26 C25 H251 133.4 360.0
C27 C26 C25 H252 23.9 240.0
C28 C27 C26 H27 180.0 180.1
C26 C27 C28 C29 359.7 359.9
C26 C27 C28 H28 179.7 180.0
C26 C27 C28 H27 180.0 179.9
C29 C28 C27 H28 180.0 179.9
C27 C28 C29 C30 0.4 0.0
C27 C28 C29 H29 180.4 180.0
C26 C27 H27 C28 180.0 180.1
H27 C27 C28 C29 179.7 180.0
H27 C27 C28 H28 359.7 0.1
N8 C30 C29 C28 359.6 359.7
C29 C28 C27 H27 179.7 180.0
C27 C28 C29 H28 180.0 180.1
C30 C29 C28 H29 180.0 180.0
C28 C29 C30 H30 179.6 180.0
H28 C28 C27 H27 359.7 0.1
C27 C28 H28 C29 180.0 179.9
H28 C28 C29 C30 180.4 180.0
H28 C28 C29 H29 0.4 360.0
N8 C30 C29 H30 180.0 179.8
C30 C29 C28 H28 180.4 180.0
C28 C29 C30 H29 180.0 180.0
H29 C29 C28 H28 0.4 360.0
C28 C29 H29 C30 180.0 180.0
H29 C29 C30 H30 359.6 360.0
N8 C30 H30 C29 180.0 180.2
H30 C30 C29 H29 359.6 360.0