PDB Chemical Component C2J
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for C2J
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C1 |
1.376 |
1.358 |
C2 |
C1 |
1.388 |
1.389 |
C2 |
C3 |
1.393 |
1.379 |
C1 |
C6 |
1.402 |
1.388 |
C3 |
C4 |
1.408 |
1.395 |
C6 |
C5 |
1.396 |
1.378 |
C4 |
C5 |
1.396 |
1.394 |
C4 |
C7 |
1.503 |
1.483 |
C17 |
C7 |
1.412 |
1.378 |
C17 |
C16 |
1.423 |
1.410 |
N3 |
C16 |
1.363 |
1.321 |
N3 |
N2 |
1.315 |
1.398 |
C7 |
C8 |
1.417 |
1.407 |
C16 |
C10 |
1.403 |
1.471 |
N2 |
C11 |
1.333 |
1.343 |
C8 |
C9 |
1.400 |
1.354 |
C10 |
C11 |
1.464 |
1.391 |
C10 |
C9 |
1.412 |
1.409 |
C11 |
N1 |
1.443 |
1.390 |
N1 |
C12 |
1.440 |
1.347 |
O2 |
C12 |
1.213 |
1.213 |
C12 |
C13 |
1.478 |
1.507 |
C13 |
C15 |
1.367 |
1.529 |
C13 |
C14 |
1.386 |
1.531 |
C15 |
C14 |
1.407 |
1.530 |
C2 |
H1 |
1.080 |
1.080 |
C3 |
H2 |
1.080 |
1.080 |
C5 |
H3 |
1.080 |
1.080 |
C6 |
H4 |
1.080 |
1.080 |
C8 |
H5 |
1.080 |
1.080 |
O1 |
H6 |
0.950 |
0.967 |
C9 |
H7 |
1.080 |
1.080 |
N1 |
H8 |
1.000 |
0.970 |
C13 |
H9 |
1.100 |
1.089 |
C14 |
H10 |
1.100 |
1.090 |
C14 |
H11 |
1.100 |
1.090 |
C15 |
H12 |
1.100 |
1.091 |
C15 |
H13 |
1.100 |
1.090 |
N2 |
H14 |
0.999 |
0.971 |
C17 |
H15 |
1.080 |
1.080 |
Bond Angles for C2J
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
119.5 |
120.1 |
C2 |
C3 |
C4 |
120.9 |
119.9 |
C3 |
C2 |
H1 |
120.1 |
119.9 |
C2 |
C3 |
H2 |
119.6 |
120.1 |
C1 |
C6 |
C5 |
120.9 |
120.1 |
C1 |
C6 |
H4 |
119.5 |
119.9 |
C3 |
C4 |
C5 |
119.1 |
119.9 |
C3 |
C4 |
C7 |
118.6 |
120.0 |
C4 |
C3 |
H2 |
119.5 |
120.1 |
C6 |
C5 |
H3 |
120.2 |
120.1 |
C5 |
C4 |
C7 |
122.2 |
120.1 |
C4 |
C5 |
H3 |
120.2 |
120.0 |
C4 |
C7 |
C8 |
119.3 |
119.4 |
N3 |
N2 |
H14 |
124.7 |
125.0 |
C7 |
C8 |
C9 |
120.8 |
121.6 |
C7 |
C8 |
H5 |
119.6 |
119.2 |
C9 |
C8 |
H5 |
119.6 |
119.3 |
C8 |
C9 |
H7 |
119.7 |
120.0 |
C10 |
C11 |
N1 |
126.9 |
126.1 |
C10 |
C9 |
H7 |
119.6 |
120.1 |
C11 |
N1 |
C12 |
120.1 |
120.0 |
C11 |
N1 |
H8 |
119.9 |
120.0 |
N1 |
C12 |
C13 |
124.7 |
120.0 |
C12 |
N1 |
H8 |
120.0 |
120.0 |
O2 |
C12 |
C13 |
113.2 |
120.0 |
C12 |
C13 |
C15 |
147.7 |
117.5 |
C12 |
C13 |
C14 |
149.8 |
117.5 |
C12 |
C13 |
H9 |
92.6 |
115.5 |
C14 |
C13 |
C15 |
61.4 |
60.0 |
C13 |
C15 |
C14 |
59.9 |
60.1 |
C15 |
C13 |
H9 |
92.8 |
117.6 |
C13 |
C15 |
H12 |
120.0 |
117.5 |
C13 |
C15 |
H13 |
120.0 |
117.6 |
C14 |
C13 |
H9 |
92.8 |
117.6 |
C13 |
C14 |
H10 |
120.2 |
117.5 |
C13 |
C14 |
H11 |
120.2 |
117.4 |
C15 |
C14 |
H10 |
120.2 |
117.5 |
C15 |
C14 |
H11 |
120.2 |
117.5 |
H10 |
C14 |
H11 |
109.5 |
115.6 |
H12 |
C15 |
H13 |
109.5 |
115.5 |
Torsion Angles for C2J
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C6 |
H4 |
0.3 |
0.2 |
C2 |
C1 |
C6 |
C5 |
359.2 |
0.0 |
C2 |
C1 |
C6 |
H4 |
179.2 |
180.0 |
C3 |
C2 |
C1 |
C6 |
359.8 |
360.0 |
C2 |
C3 |
C4 |
C5 |
357.2 |
360.0 |
C2 |
C3 |
C4 |
C7 |
180.7 |
180.0 |
C4 |
C3 |
C2 |
H2 |
180.0 |
180.1 |
C1 |
C6 |
C5 |
H3 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H1 |
182.0 |
180.0 |
C2 |
C3 |
C4 |
H2 |
180.0 |
179.9 |
C5 |
C4 |
C3 |
C7 |
176.5 |
180.0 |
C3 |
C4 |
C5 |
H3 |
181.8 |
180.0 |
C3 |
C4 |
C7 |
C8 |
141.4 |
360.0 |
C1 |
C6 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
C7 |
178.2 |
180.0 |
C4 |
C5 |
C6 |
H3 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
C4 |
360.0 |
0.0 |
C3 |
C4 |
C5 |
C7 |
183.6 |
180.0 |
C5 |
C4 |
C3 |
H2 |
177.2 |
180.1 |
C6 |
C5 |
C4 |
H3 |
180.0 |
180.0 |
C5 |
C4 |
C7 |
C8 |
325.0 |
180.0 |
C3 |
C4 |
C7 |
C5 |
176.4 |
180.0 |
C7 |
C4 |
C3 |
H2 |
0.7 |
0.0 |
C7 |
C4 |
C5 |
H3 |
358.2 |
0.0 |
C4 |
C7 |
C8 |
C9 |
181.4 |
180.0 |
C4 |
C7 |
C8 |
H5 |
1.4 |
360.0 |
C17 |
C7 |
C8 |
H5 |
178.5 |
180.2 |
C16 |
N3 |
N2 |
H14 |
179.8 |
180.0 |
C9 |
C8 |
C7 |
H5 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H7 |
181.6 |
180.0 |
C16 |
C10 |
C9 |
H7 |
179.2 |
180.0 |
N2 |
C11 |
N1 |
H8 |
315.3 |
180.1 |
C7 |
C8 |
C9 |
H5 |
180.0 |
180.0 |
C10 |
C9 |
C8 |
H7 |
180.0 |
180.0 |
C10 |
C11 |
N1 |
C12 |
316.2 |
180.0 |
C10 |
C11 |
N1 |
H8 |
136.2 |
0.1 |
C10 |
C9 |
C8 |
H5 |
181.6 |
180.0 |
C8 |
C9 |
C10 |
H7 |
180.0 |
180.0 |
C9 |
C10 |
C11 |
N1 |
359.2 |
0.0 |
C11 |
N1 |
C12 |
C13 |
181.0 |
180.0 |
C12 |
N1 |
C11 |
H8 |
180.0 |
179.9 |
C11 |
N1 |
C12 |
H8 |
180.0 |
180.1 |
O2 |
C12 |
N1 |
C13 |
178.7 |
180.1 |
N1 |
C12 |
C13 |
C15 |
76.4 |
180.1 |
N1 |
C12 |
C13 |
C14 |
236.9 |
248.7 |
N1 |
C12 |
C13 |
H9 |
336.9 |
34.4 |
N1 |
C12 |
O2 |
C13 |
181.1 |
179.9 |
O2 |
C12 |
N1 |
H8 |
179.8 |
180.0 |
O2 |
C12 |
C13 |
C15 |
257.5 |
360.0 |
O2 |
C12 |
C13 |
C14 |
58.1 |
68.6 |
O2 |
C12 |
C13 |
H9 |
158.1 |
214.3 |
C13 |
C12 |
N1 |
H8 |
1.0 |
359.9 |
C14 |
C13 |
C12 |
C15 |
160.6 |
68.6 |
C12 |
C13 |
C15 |
C14 |
169.0 |
107.5 |
C15 |
C13 |
C12 |
H9 |
99.4 |
145.7 |
C12 |
C13 |
C15 |
H12 |
278.5 |
215.0 |
C12 |
C13 |
C15 |
H13 |
59.6 |
360.0 |
C14 |
C13 |
C12 |
H9 |
260.0 |
214.3 |
C12 |
C13 |
C14 |
H10 |
300.8 |
359.9 |
C12 |
C13 |
C14 |
H11 |
82.6 |
145.0 |
C12 |
C13 |
C15 |
H9 |
260.6 |
215.0 |
C14 |
C13 |
C15 |
H9 |
91.6 |
107.5 |
C15 |
C13 |
C14 |
H10 |
109.1 |
107.4 |
C15 |
C13 |
C14 |
H11 |
250.9 |
252.5 |
C13 |
C15 |
C14 |
H10 |
250.9 |
252.5 |
C13 |
C15 |
C14 |
H11 |
109.1 |
107.4 |
H12 |
C15 |
C13 |
H13 |
218.9 |
215.0 |
C12 |
C13 |
C14 |
C15 |
191.7 |
252.5 |
C12 |
C13 |
C14 |
H9 |
100.0 |
145.0 |
C14 |
C13 |
C15 |
C14 |
360.0 |
360.0 |
C15 |
C13 |
C14 |
H9 |
268.3 |
252.4 |
C14 |
C13 |
C15 |
H12 |
109.4 |
107.5 |
C14 |
C13 |
C15 |
H13 |
250.6 |
252.5 |
C15 |
C14 |
C13 |
H10 |
250.9 |
252.6 |
C15 |
C14 |
C13 |
H11 |
109.1 |
107.5 |
H10 |
C14 |
C13 |
H11 |
218.2 |
215.0 |
C14 |
C15 |
C13 |
H9 |
268.4 |
252.5 |
C13 |
C15 |
C14 |
H12 |
109.5 |
107.5 |
C13 |
C15 |
C14 |
H13 |
250.5 |
252.4 |
C15 |
C14 |
C13 |
H9 |
91.7 |
107.6 |
C13 |
C14 |
C15 |
H10 |
109.1 |
107.5 |
C13 |
C14 |
C15 |
H11 |
250.9 |
252.6 |
H10 |
C14 |
C15 |
H11 |
141.8 |
145.1 |
H1 |
C2 |
C1 |
C6 |
179.8 |
180.0 |
H1 |
C2 |
C3 |
C4 |
182.0 |
180.0 |
H1 |
C2 |
C3 |
H2 |
2.0 |
360.0 |
C2 |
C3 |
H2 |
C4 |
180.0 |
180.1 |
H2 |
C3 |
C2 |
H1 |
2.0 |
360.0 |
H2 |
C3 |
C4 |
C5 |
177.2 |
180.1 |
H2 |
C3 |
C4 |
C7 |
0.7 |
0.0 |
H3 |
C5 |
C4 |
C7 |
358.2 |
0.0 |
C1 |
C6 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C6 |
C5 |
H3 |
359.9 |
0.0 |
C7 |
C8 |
H5 |
C9 |
180.0 |
180.0 |
H5 |
C8 |
C9 |
H7 |
1.6 |
360.0 |
H7 |
C9 |
C8 |
H5 |
1.6 |
360.0 |
C11 |
N1 |
H8 |
C12 |
180.0 |
179.9 |
H8 |
N1 |
C12 |
C13 |
1.0 |
359.9 |
C12 |
C13 |
H9 |
C15 |
148.2 |
145.7 |
C12 |
C13 |
H9 |
C14 |
209.7 |
214.3 |
C14 |
C13 |
H9 |
C15 |
298.5 |
291.3 |
H9 |
C13 |
C15 |
C14 |
268.4 |
252.5 |
H9 |
C13 |
C15 |
H12 |
17.8 |
360.0 |
H9 |
C13 |
C15 |
H13 |
158.9 |
145.0 |
H9 |
C13 |
C14 |
H10 |
200.8 |
215.0 |
H9 |
C13 |
C14 |
H11 |
342.6 |
0.0 |
H10 |
C14 |
C13 |
C15 |
109.1 |
107.4 |
H10 |
C14 |
C13 |
H9 |
200.8 |
215.0 |
C13 |
C14 |
H10 |
H11 |
145.5 |
145.7 |
C15 |
C14 |
H10 |
H11 |
214.5 |
214.2 |
H11 |
C14 |
C13 |
C15 |
250.9 |
252.5 |
H11 |
C14 |
C13 |
H9 |
342.6 |
0.0 |
C13 |
C14 |
H11 |
H10 |
214.5 |
214.3 |
C15 |
C14 |
H11 |
H10 |
145.5 |
145.7 |
C13 |
C15 |
H12 |
C14 |
289.5 |
291.3 |
H12 |
C15 |
C13 |
H9 |
17.8 |
360.0 |
C13 |
C15 |
H12 |
H13 |
144.8 |
145.7 |
H12 |
C15 |
C14 |
H10 |
141.5 |
145.0 |
H12 |
C15 |
C14 |
H11 |
359.6 |
359.9 |
C13 |
C15 |
H13 |
C14 |
70.5 |
68.7 |
H13 |
C15 |
C13 |
H9 |
158.9 |
145.0 |
C13 |
C15 |
H13 |
H12 |
215.2 |
214.3 |
H13 |
C15 |
C14 |
H10 |
0.4 |
0.1 |
H13 |
C15 |
C14 |
H11 |
218.6 |
215.0 |