PDB Chemical Component C2G

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C2G

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.386 1.344
N1 C6 1.341 1.363
N1 C1' 1.490 1.464
C2 N3 1.356 1.332
C2 O2 1.243 1.219
N3 C4 1.353 1.327
C4 C5 1.393 1.408
C4 N4 1.327 1.376
C5 C6 1.385 1.355
C5 HC5 1.103 1.081
C6 HC6 1.103 1.080
N4 HN41 1.020 0.969
N4 HN42 1.020 0.969
C1' C2' 1.487 1.545
C1' O4' 1.408 1.444
C1' HC1 1.115 1.091
C2' O2' 1.414 1.429
C2' C3' 1.502 1.547
C2' HC2 1.114 1.090
O2' HO2 0.951 0.967
C3' C4' 1.535 1.544
C3' O3' 1.418 1.428
C3' HC3 1.116 1.091
C4' O4' 1.435 1.444
C4' C5' 1.513 1.530
C4' HC4 1.115 1.091
O3' HO3 0.951 0.966
C5' O5' 1.420 1.428
C5' HC51 1.115 1.090
C5' HC52 1.115 1.090
O5' PA 1.670 1.609
PA O1A 1.563 1.480
PA O2A 1.563 1.610
PA O3A 1.642 1.610
O2A H2A 0.950 0.967
O3A PB 1.654 1.609
PB O1B 1.569 1.479
PB O2B 1.573 1.610
PB O3B 1.655 1.609
O2B H2B 0.950 0.967
O3B C3G 1.426 1.428
O1G C1G 1.432 1.429
O1G H1G 0.951 0.966
C1G C2G 1.494 1.529
C1G H1G1 1.115 1.090
C1G H1G2 1.115 1.090
C2G O2G 1.441 1.429
C2G C3G 1.513 1.530
C2G H2G 1.115 1.089
O2G HOG 0.950 0.966
C3G H3G1 1.115 1.088
C3G H3G2 1.114 1.090

Bond Angles for C2G

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 115.7 120.4
C2 N1 C1' 121.5 119.8
N1 C2 N3 122.9 121.1
N1 C2 O2 122.1 119.5
C6 N1 C1' 122.7 119.8
N1 C6 C5 124.7 119.2
N1 C6 HC6 115.8 120.4
N1 C1' C2' 112.3 110.4
N1 C1' O4' 110.3 110.4
N1 C1' HC1 104.7 110.3
N3 C2 O2 115.0 119.4
C2 N3 C4 119.4 120.7
N3 C4 C5 120.8 119.6
N3 C4 N4 117.5 120.2
C5 C4 N4 121.7 120.2
C4 C5 C6 116.5 119.0
C4 C5 HC5 122.1 120.5
C4 N4 HN41 117.5 120.0
C4 N4 HN42 109.3 120.0
C6 C5 HC5 121.5 120.5
C5 C6 HC6 119.5 120.3
HN41 N4 HN42 109.4 120.0
C2' C1' O4' 101.1 104.9
C2' C1' HC1 113.3 110.4
C1' C2' O2' 108.9 110.8
C1' C2' C3' 102.4 104.0
C1' C2' HC2 116.5 110.4
O4' C1' HC1 115.3 110.3
C1' O4' C4' 108.0 105.3
O2' C2' C3' 115.3 110.5
O2' C2' HC2 103.9 110.5
C2' O2' HO2 109.0 106.8
C3' C2' HC2 110.3 110.5
C2' C3' C4' 103.6 104.1
C2' C3' O3' 115.2 110.5
C2' C3' HC3 108.8 110.5
C4' C3' O3' 106.3 110.6
C4' C3' HC3 117.3 110.5
C3' C4' O4' 103.9 104.9
C3' C4' C5' 99.4 110.5
C3' C4' HC4 120.6 110.3
O3' C3' HC3 106.1 110.4
C3' O3' HO3 115.2 106.8
O4' C4' C5' 114.3 110.4
O4' C4' HC4 107.3 110.3
C5' C4' HC4 111.3 110.3
C4' C5' O5' 115.1 109.5
C4' C5' HC51 110.1 109.5
C4' C5' HC52 110.1 109.5
O5' C5' HC51 110.2 109.5
O5' C5' HC52 110.2 109.4
C5' O5' PA 116.2 106.8
HC51 C5' HC52 100.1 109.5
O5' PA O1A 103.6 109.4
O5' PA O2A 108.7 109.5
O5' PA O3A 110.7 109.5
O1A PA O2A 110.7 109.5
O1A PA O3A 107.3 109.4
O2A PA O3A 115.2 109.5
PA O2A H2A 108.7 106.8
PA O3A PB 117.3 106.8
O3A PB O1B 108.3 109.5
O3A PB O2B 110.4 109.5
O3A PB O3B 104.5 109.5
O1B PB O2B 112.6 109.4
O1B PB O3B 107.2 109.5
O2B PB O3B 113.4 109.4
PB O2B H2B 110.4 106.8
PB O3B C3G 120.8 106.9
O3B C3G C2G 117.0 109.5
O3B C3G H3G1 109.5 109.5
O3B C3G H3G2 109.5 109.5
C1G O1G H1G 104.2 106.9
O1G C1G C2G 104.1 109.5
O1G C1G H1G1 114.2 109.5
O1G C1G H1G2 114.2 109.4
C2G C1G H1G1 114.3 109.5
C2G C1G H1G2 114.2 109.5
C1G C2G O2G 111.4 109.5
C1G C2G C3G 113.3 109.5
C1G C2G H2G 105.2 109.5
H1G1 C1G H1G2 96.2 109.5
O2G C2G C3G 108.8 109.4
O2G C2G H2G 110.1 109.5
C2G O2G HOG 111.4 106.8
C3G C2G H2G 108.0 109.5
C2G C3G H3G1 109.4 109.5
C2G C3G H3G2 109.5 109.4
H3G1 C3G H3G2 100.7 109.4

Torsion Angles for C2G

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 N1 C2 C1' 183.2 179.9
C2 N1 C6 C5 0.3 359.7
C2 N1 C6 HC6 180.4 180.0
C2 N1 C1' C2' 111.9 301.4
C2 N1 C1' O4' 223.9 57.0
C2 N1 C1' HC1 348.5 179.2
N3 C2 N1 O2 180.1 180.0
N1 C2 N3 C4 0.0 0.0
C2 N1 C6 C1' 176.7 180.1
C6 N1 C2 N3 359.7 360.0
C6 N1 C2 O2 179.6 180.0
C6 N1 C1' C2' 288.5 121.5
C6 N1 C1' O4' 40.4 237.1
C6 N1 C1' HC1 165.1 359.3
C4 C5 C6 N1 360.0 0.6
N1 C6 C5 HC5 180.0 179.9
C5 C6 N1 HC6 180.0 179.7
C2 N1 C1' C6 183.4 179.9
C1' N1 C2 N3 176.5 180.1
C1' N1 C2 O2 356.4 0.1
C1' N1 C6 C5 183.6 179.6
C1' N1 C6 HC6 3.6 359.9
C2' C1' N1 O4' 248.0 244.4
C2' C1' N1 HC1 123.4 122.2
N1 C1' C2' O2' 284.2 261.5
N1 C1' C2' C3' 161.7 142.8
N1 C1' C2' HC2 41.3 24.2
O4' C1' N1 HC1 235.4 237.8
N1 C1' O4' C4' 197.2 200.7
N3 C2 N1 C6 359.7 360.0
N3 C2 N1 C1' 176.5 180.1
N1 C2 N3 O2 179.9 180.0
C2 N3 C4 C5 0.3 0.3
C2 N3 C4 N4 180.3 180.0
O2 C2 N1 C6 179.6 180.0
O2 C2 N1 C1' 356.4 0.1
N1 C2 O2 N3 180.1 180.0
O2 C2 N3 C4 180.1 180.0
C4 N3 C2 O2 180.1 180.0
C5 C4 N3 N4 180.0 180.4
N3 C4 C5 C6 359.7 359.4
N3 C4 C5 HC5 179.7 180.0
N3 C4 N4 HN41 180.0 0.0
N3 C4 N4 HN42 54.7 179.7
N1 C6 C5 C4 360.0 0.6
N3 C4 C5 N4 180.0 179.6
C5 C4 N4 HN41 0.0 179.7
C5 C4 N4 HN42 234.7 359.4
C6 C5 C4 HC5 180.0 179.4
C4 C5 C6 HC6 179.9 180.3
N3 C4 N4 C5 180.0 180.4
N4 C4 C5 C6 179.7 179.7
N4 C4 C5 HC5 359.6 0.4
HN41 N4 C4 HN42 125.3 180.3
C5 C6 N1 C1' 183.6 179.6
N1 C6 C5 HC6 180.0 180.3
C6 C5 C4 N4 179.7 179.7
C4 C5 C6 HC5 180.0 180.6
HC5 C5 C4 N4 359.6 0.4
C4 C5 HC5 C6 180.0 179.3
HC5 C5 C6 HC6 359.9 359.6
HC6 C6 N1 C1' 3.6 359.9
N1 C6 HC6 C5 180.0 179.7
HC6 C6 C5 HC5 359.9 359.6
C4 N4 HN41 HN42 234.7 179.7
C4 N4 HN42 HN41 129.9 180.3
N1 C1' C2' O4' 117.6 119.0
N1 C1' C2' HC1 241.6 237.8
O4' C1' C2' HC1 124.0 118.8
C2' C1' O4' C4' 316.2 319.6
O2' C2' C1' C3' 122.6 118.7
O2' C2' C1' HC2 243.0 237.3
C1' C2' O2' HO2 180.0 183.8
C3' C2' C1' HC2 120.4 118.5
C1' C2' C3' C4' 331.2 0.1
C1' C2' C3' O3' 86.9 118.9
C1' C2' C3' HC3 205.8 241.5
N1 C1' O4' C2' 241.0 241.1
N1 C1' O4' HC1 118.4 122.2
C2' C1' O4' HC1 237.4 241.1
O4' C1' C2' O2' 166.7 142.6
O4' C1' C2' C3' 44.1 23.8
O4' C1' C2' HC2 283.7 265.3
C3' C4' O4' C1' 25.1 40.4
C1' O4' C4' C5' 132.4 159.5
C1' O4' C4' HC4 256.4 281.6
N1 C1' HC1 C2' 122.7 122.2
N1 C1' HC1 O4' 238.6 237.7
C2' C1' HC1 O4' 115.9 115.5
HC1 C1' C2' O2' 42.7 23.7
HC1 C1' C2' C3' 280.1 265.0
HC1 C1' C2' HC2 159.7 146.4
HC1 C1' O4' C4' 78.8 78.5
O2' C2' C1' O4' 166.7 142.6
O2' C2' C1' HC1 42.7 23.7
C1' C2' O2' C3' 245.6 245.3
C1' C2' O2' HC2 124.8 122.7
C3' C2' O2' HC2 239.2 237.4
O2' C2' C3' C4' 213.1 241.2
O2' C2' C3' O3' 328.7 359.9
O2' C2' C3' HC3 87.6 122.5
C3' C2' C1' O4' 44.1 23.8
C3' C2' C1' HC1 280.1 265.0
C1' C2' C3' O2' 118.1 119.0
C1' C2' C3' HC2 235.3 241.6
O2' C2' C3' HC2 117.2 122.6
C3' C2' O2' HO2 294.4 298.5
C4' C3' C2' O3' 244.3 241.2
C4' C3' C2' HC3 125.4 118.6
C2' C3' C4' O4' 3.6 336.0
C2' C3' C4' C5' 245.5 217.0
C2' C3' C4' HC4 123.7 94.8
O3' C3' C2' HC3 241.1 237.4
C2' C3' O3' HO3 180.0 65.2
HC2 C2' C1' O4' 283.7 265.3
HC2 C2' C1' HC1 159.7 146.4
C1' C2' HC2 O2' 240.2 237.1
C1' C2' HC2 C3' 116.1 114.5
O2' C2' HC2 C3' 235.9 237.4
HC2 C2' O2' HO2 55.2 61.1
HC2 C2' C3' C4' 95.9 118.6
HC2 C2' C3' O3' 211.5 237.3
HC2 C2' C3' HC3 330.4 359.9
HO2 O2' C2' C3' 294.4 298.5
HO2 O2' C2' HC2 55.2 61.1
C1' O4' C4' C3' 25.1 40.4
C4' C3' C2' HC2 95.9 118.6
C2' C3' C4' O3' 121.8 118.7
C2' C3' C4' HC3 240.2 241.3
O3' C3' C4' HC3 118.4 122.6
C4' C3' O3' HO3 294.1 179.9
O4' C4' C3' C5' 118.1 119.0
O4' C4' C3' HC4 239.8 241.2
C5' C4' C3' HC4 121.7 122.2
C3' C4' C5' O5' 104.7 176.9
C3' C4' C5' HC51 230.0 296.9
C3' C4' C5' HC52 339.4 57.0
O3' C3' C2' HC2 211.5 237.3
C2' C3' O3' C4' 245.9 245.3
C2' C3' O3' HC3 120.4 122.7
C4' C3' O3' HC3 234.5 237.4
O3' C3' C4' O4' 241.8 217.2
O3' C3' C4' C5' 123.7 98.3
O3' C3' C4' HC4 2.0 336.0
HC3 C3' C2' HC2 330.4 359.9
C2' C3' HC3 C4' 117.0 114.7
C2' C3' HC3 O3' 235.5 237.3
C4' C3' HC3 O3' 118.5 122.7
HC3 C3' C4' O4' 123.4 94.7
HC3 C3' C4' C5' 5.3 335.7
HC3 C3' C4' HC4 243.6 213.5
HC3 C3' O3' HO3 59.6 302.6
C4' O4' C1' HC1 78.8 78.5
O4' C4' C3' O3' 241.8 217.2
O4' C4' C3' HC3 123.4 94.7
C3' C4' O4' C5' 252.7 241.0
C3' C4' O4' HC4 128.8 118.8
C5' C4' O4' HC4 236.1 237.8
O4' C4' C5' O5' 354.7 61.4
O4' C4' C5' HC51 120.0 181.4
O4' C4' C5' HC52 229.4 301.5
C5' C4' C3' O3' 123.7 98.3
C5' C4' C3' HC3 5.3 335.7
C3' C4' C5' O4' 110.0 115.5
C3' C4' C5' HC4 231.8 237.7
O4' C4' C5' HC4 121.7 122.2
O5' C5' C4' HC51 234.7 240.0
O5' C5' C4' HC52 125.3 119.9
C4' C5' O5' PA 204.3 180.0
HC51 C5' C4' HC52 250.6 239.9
HC4 C4' C3' O3' 2.0 336.0
HC4 C4' C3' HC3 243.6 213.5
C3' C4' HC4 O4' 241.5 244.6
C3' C4' HC4 C5' 115.8 122.4
O4' C4' HC4 C5' 234.3 237.8
HC4 C4' C5' O5' 232.9 299.2
HC4 C4' C5' HC51 358.2 59.2
HC4 C4' C5' HC52 107.6 179.3
HO3 O3' C3' HC3 59.6 302.6
O5' C5' C4' HC4 232.9 299.2
C4' C5' O5' HC51 125.3 120.0
C4' C5' O5' HC52 234.7 240.0
HC51 C5' O5' HC52 109.5 120.0
C5' O5' PA O1A 236.4 60.0
C5' O5' PA O2A 118.7 300.1
C5' O5' PA O3A 351.1 180.0
HC51 C5' C4' HC4 358.2 59.2
C4' C5' HC51 O5' 231.9 239.9
C4' C5' HC51 HC52 115.9 120.0
O5' C5' HC51 HC52 244.0 240.1
HC51 C5' O5' PA 79.0 60.0
HC52 C5' C4' HC4 107.6 179.3
C4' C5' HC52 O5' 128.1 120.0
C4' C5' HC52 HC51 244.1 240.0
O5' C5' HC52 HC51 116.0 120.0
HC52 C5' O5' PA 329.5 300.0
PA O5' C5' HC51 79.0 60.0
PA O5' C5' HC52 329.5 300.0
O1A PA O5' O2A 117.7 120.0
O1A PA O5' O3A 245.3 240.1
O2A PA O5' O3A 127.5 120.1
O5' PA O2A H2A 180.0 299.9
O5' PA O3A PB 110.9 180.0
O5' PA O1A O2A 243.7 240.0
O5' PA O1A O3A 117.1 120.0
O2A PA O1A O3A 233.5 240.0
O1A PA O2A H2A 66.9 180.0
O1A PA O3A PB 223.3 299.9
O5' PA O2A O1A 113.2 119.9
O5' PA O2A O3A 235.1 239.9
O1A PA O2A O3A 121.9 120.0
O2A PA O3A PB 347.0 60.0
O5' PA O3A O1A 247.6 240.1
O5' PA O3A O2A 123.8 120.0
O1A PA O3A O2A 236.2 240.0
O3A PA O2A H2A 304.9 60.0
PA O3A PB O1B 76.1 60.0
PA O3A PB O2B 312.4 300.1
PA O3A PB O3B 190.1 180.1
H2A O2A PA O3A 304.9 60.0
O1B PB O3A O2B 123.7 119.9
O1B PB O3A O3B 246.0 239.9
O2B PB O3A O3B 122.3 120.0
O3A PB O2B H2B 180.0 300.0
O3A PB O3B C3G 194.2 180.0
O3A PB O1B O2B 237.7 240.0
O3A PB O1B O3B 112.3 120.1
O2B PB O1B O3B 234.6 240.1
O1B PB O2B H2B 58.8 180.0
O1B PB O3B C3G 309.0 300.1
O3A PB O2B O1B 121.2 120.0
O3A PB O2B O3B 243.1 239.9
O1B PB O2B O3B 121.9 120.0
O2B PB O3B C3G 73.9 60.0
O3A PB O3B O1B 245.2 239.9
O3A PB O3B O2B 120.3 120.0
O1B PB O3B O2B 235.1 240.1
O3B PB O2B H2B 296.9 60.1
PB O3B C3G C2G 175.1 179.9
PB O3B C3G H3G1 300.3 300.0
PB O3B C3G H3G2 49.8 60.0
H2B O2B PB O3B 296.9 60.1
C1G C2G C3G O3B 95.2 180.0
O2G C2G C3G O3B 330.7 60.0
O3B C3G C2G H2G 211.3 300.1
C2G C3G O3B H3G1 234.8 240.0
C2G C3G O3B H3G2 125.3 120.0
H3G1 C3G O3B H3G2 250.5 240.0
C2G C1G O1G H1G1 234.7 120.1
C2G C1G O1G H1G2 125.3 240.0
O1G C1G C2G O2G 298.5 299.9
O1G C1G C2G C3G 175.4 180.0
O1G C1G C2G H2G 57.7 59.9
H1G1 C1G O1G H1G2 250.6 120.0
H1G O1G C1G C2G 180.0 180.0
H1G O1G C1G H1G1 305.3 59.9
H1G O1G C1G H1G2 54.8 300.0
O3B C3G C2G C1G 95.2 180.0
C2G C1G O1G H1G 180.0 180.0
O1G C1G C2G H1G1 125.2 239.9
O1G C1G C2G H1G2 234.7 119.9
H1G1 C1G C2G H1G2 109.5 240.0
O2G C2G C1G C3G 123.1 119.9
O2G C2G C1G H2G 240.8 240.0
C1G C2G O2G HOG 180.0 300.1
C3G C2G C1G H2G 117.7 120.0
C1G C2G C3G H3G1 330.0 59.9
C1G C2G C3G H3G2 220.5 300.0
H1G1 C1G O1G H1G 305.3 59.9
O1G C1G H1G1 C2G 240.3 120.1
O1G C1G H1G1 H1G2 120.1 240.1
C2G C1G H1G1 H1G2 239.8 120.0
H1G1 C1G C2G O2G 173.3 60.0
H1G1 C1G C2G C3G 50.2 300.0
H1G1 C1G C2G H2G 292.5 180.0
H1G2 C1G O1G H1G 54.8 300.0
O1G C1G H1G2 C2G 119.7 240.0
O1G C1G H1G2 H1G1 239.9 120.0
C2G C1G H1G2 H1G1 120.2 240.0
H1G2 C1G C2G O2G 63.7 180.0
H1G2 C1G C2G C3G 300.7 60.1
H1G2 C1G C2G H2G 182.9 300.0
O3B C3G C2G O2G 330.7 60.0
O2G C2G C1G H1G1 173.3 60.0
O2G C2G C1G H1G2 63.7 180.0
C1G C2G O2G C3G 234.4 240.0
C1G C2G O2G H2G 116.2 120.1
C3G C2G O2G H2G 241.9 240.0
O2G C2G C3G H3G1 205.5 300.0
O2G C2G C3G H3G2 96.0 180.0
O3B C3G C2G H3G1 125.3 120.1
O3B C3G C2G H3G2 234.7 240.0
C3G C2G C1G H1G1 50.2 300.0
C3G C2G C1G H1G2 300.7 60.1
C1G C2G C3G O2G 124.5 120.0
C1G C2G C3G H2G 243.9 239.9
O2G C2G C3G H2G 119.4 120.0
C3G C2G O2G HOG 305.6 60.1
H3G1 C3G C2G H3G2 109.5 119.9
H2G C2G C1G H1G1 292.5 180.0
H2G C2G C1G H1G2 182.9 300.0
C1G C2G H2G O2G 239.9 240.0
C1G C2G H2G C3G 121.3 120.0
O2G C2G H2G C3G 241.4 240.1
H2G C2G O2G HOG 63.8 180.1
H2G C2G C3G H3G1 86.0 180.0
H2G C2G C3G H3G2 336.6 60.0
HOG O2G C2G C3G 305.6 60.1
HOG O2G C2G H2G 63.8 180.1
O3B C3G H3G1 C2G 230.5 239.9
O3B C3G H3G1 H3G2 115.3 120.0
H3G1 C3G C2G H2G 86.0 180.0
C2G C3G H3G1 H3G2 244.8 240.1
O3B C3G H3G2 C2G 129.5 120.0
O3B C3G H3G2 H3G1 244.7 240.0
H3G2 C3G C2G H2G 336.6 60.0
C2G C3G H3G2 H3G1 115.2 120.0