PDB Chemical Component C00

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for C00

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.390 1.382
C1 C10 1.388 1.387
C2 C4 1.387 1.387
C6 C8 1.395 1.410
C6 C21 1.398 1.479
C6 C4 1.385 1.385
C8 C15 1.481 1.478
C8 C10 1.393 1.386
C13 C10 1.507 1.507
C15 N19 1.341 1.346
C15 O17 1.285 1.214
C26 C28 1.412 1.384
C26 C36 1.403 1.394
C26 N19 1.353 1.403
C28 C30 1.399 1.394
C30 C32 1.375 1.394
C30 C45 1.494 1.483
C32 C34 1.376 1.380
C34 C36 1.375 1.387
C36 O39 1.364 1.360
C41 C46 1.393 1.380
C41 C42 1.394 1.383
O23 C21 1.293 1.214
C21 N19 1.342 1.346
C45 C46 1.401 1.394
C45 C44 1.398 1.394
C44 C43 1.396 1.380
C43 C42 1.396 1.384
C1 H1 1.081 1.080
C2 H2 1.080 1.080
C13 H13 1.100 1.090
C13 H13A 1.100 1.090
C13 H13B 1.100 1.090
C28 H28 1.080 1.080
C32 H32 1.080 1.079
C34 H34 1.080 1.080
C41 H41 1.080 1.079
C4 H4 1.080 1.080
O39 HO39 0.950 0.967
C46 H46 1.080 1.080
C44 H44 1.080 1.080
C43 H43 1.080 1.079
C42 H42 1.080 1.080

Bond Angles for C00

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C10 120.6 120.5
C1 C2 C4 121.4 120.5
C2 C1 H1 119.7 119.8
C1 C2 H2 119.3 119.8
C1 C10 C8 118.3 119.7
C1 C10 C13 119.1 120.2
C10 C1 H1 119.7 119.7
C2 C4 C6 118.1 119.7
C4 C2 H2 119.4 119.8
C2 C4 H4 121.0 120.1
C8 C6 C21 107.8 105.9
C8 C6 C4 121.0 119.8
C6 C8 C15 102.8 105.9
C6 C8 C10 120.6 119.8
C21 C6 C4 131.2 134.3
C6 C21 O23 122.6 125.7
C6 C21 N19 111.8 108.6
C6 C4 H4 120.9 120.2
C15 C8 C10 136.6 134.3
C8 C15 N19 110.8 108.6
C8 C15 O17 122.4 125.8
C8 C10 C13 122.7 120.2
C10 C13 H13 109.5 109.5
C10 C13 H13A 109.4 109.4
C10 C13 H13B 109.4 109.5
N19 C15 O17 126.8 125.7
C15 N19 C26 126.6 124.5
C15 N19 C21 106.8 111.1
C28 C26 C36 114.3 120.0
C28 C26 N19 122.7 120.1
C26 C28 C30 123.7 119.9
C26 C28 H28 118.1 120.0
C36 C26 N19 123.0 120.0
C26 C36 C34 122.6 120.1
C26 C36 O39 122.6 120.0
C26 N19 C21 126.5 124.5
C28 C30 C32 118.6 119.9
C28 C30 C45 125.3 120.0
C30 C28 H28 118.2 120.1
C32 C30 C45 116.1 120.0
C30 C32 C34 119.8 120.0
C30 C32 H32 120.1 120.0
C30 C45 C46 119.1 120.1
C30 C45 C44 121.3 120.1
C32 C34 C36 121.0 120.1
C34 C32 H32 120.1 120.0
C32 C34 H34 119.5 119.9
C34 C36 O39 114.8 119.9
C36 C34 H34 119.5 120.0
C36 O39 HO39 109.5 113.9
C46 C41 C42 119.5 120.1
C41 C46 C45 120.7 119.9
C46 C41 H41 120.3 120.0
C41 C46 H46 119.6 120.1
C41 C42 C43 120.1 120.3
C42 C41 H41 120.3 119.9
C41 C42 H42 119.9 119.9
O23 C21 N19 125.6 125.7
C46 C45 C44 119.5 119.7
C45 C46 H46 119.6 120.0
C45 C44 C43 119.7 119.9
C45 C44 H44 120.1 120.1
C44 C43 C42 120.4 120.1
C43 C44 H44 120.1 120.0
C44 C43 H43 119.8 120.0
C42 C43 H43 119.8 120.0
C43 C42 H42 119.9 119.8
H13 C13 H13A 109.5 109.5
H13 C13 H13B 109.5 109.5
H13A C13 H13B 109.5 109.5

Torsion Angles for C00

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C10 C8 359.0 0.1
C2 C1 C10 C13 179.4 180.0
C10 C1 C2 H1 180.0 180.2
C1 C2 C4 C6 358.5 0.1
C4 C2 C1 H2 180.0 179.9
C1 C2 C4 H4 178.5 180.0
C10 C1 C2 C4 1.6 359.9
C2 C1 C10 H1 180.0 179.8
C10 C1 C2 H2 181.6 180.0
C6 C8 C10 C1 0.3 359.9
C15 C8 C10 C1 180.3 180.0
C8 C10 C1 C13 179.7 180.0
C1 C10 C13 H13 63.1 90.0
C1 C10 C13 H13A 183.1 210.0
C1 C10 C13 H13B 303.1 330.0
C4 C2 C1 C10 1.6 359.9
C4 C2 C1 H1 181.7 179.8
C1 C2 C4 H2 180.0 180.1
C8 C6 C4 C2 0.8 359.9
C21 C6 C4 C2 180.4 180.1
C6 C4 C2 H4 180.0 180.1
C1 C10 C8 C6 0.3 359.9
C2 C4 C6 C8 0.8 359.9
C21 C6 C8 C4 180.3 179.9
C8 C6 C21 O23 180.4 180.0
C8 C6 C21 N19 359.2 0.1
C8 C6 C4 H4 180.8 180.0
C15 C8 C6 C10 180.0 180.0
C6 C8 C15 N19 0.7 0.0
C6 C8 C15 O17 180.0 180.0
C6 C8 C10 C13 179.9 180.0
C2 C4 C6 C21 180.4 180.1
C8 C6 C21 C4 179.7 180.1
C21 C6 C8 C15 0.0 360.0
C21 C6 C8 C10 180.1 180.0
C21 C6 C4 H4 0.4 0.1
C15 N19 C21 C6 1.2 359.9
C26 N19 C21 C6 178.6 179.9
O23 C21 C6 N19 181.2 179.9
C6 C4 C2 H2 178.5 180.0
C2 C4 C6 H4 180.0 179.9
C8 C6 C4 C21 180.4 179.9
C4 C6 C8 C15 179.8 180.0
C4 C6 C8 C10 359.8 0.1
C4 C6 C21 O23 0.7 359.9
C4 C6 C21 N19 179.6 180.0
C1 C10 C8 C15 180.3 180.0
C15 C8 C6 C21 0.0 360.0
C15 C8 C6 C4 179.8 180.0
C6 C8 C15 C10 180.0 180.0
C15 C8 C10 C13 360.0 0.0
N19 C15 C8 O17 180.6 180.0
C8 C15 N19 C26 181.5 180.1
C8 C15 N19 C21 358.9 0.0
C1 C10 C8 C13 180.4 180.0
C8 C10 C1 H1 179.0 180.2
C10 C8 C6 C21 180.1 180.0
C10 C8 C6 C4 359.8 0.1
C6 C8 C10 C15 179.9 180.0
C10 C8 C15 N19 180.6 180.0
C10 C8 C15 O17 360.0 360.0
C8 C10 C13 H13 243.5 270.0
C8 C10 C13 H13A 3.5 30.0
C8 C10 C13 H13B 123.5 150.0
C1 C10 C13 C8 179.6 180.0
C13 C10 C1 H1 359.3 0.2
H13 C13 C10 H13A 240.0 240.0
H13 C13 C10 H13B 120.0 120.0
H13A C13 C10 H13B 240.0 240.0
C6 C21 N19 C15 1.2 359.9
N19 C15 C8 C10 180.6 180.0
C8 C15 N19 O17 179.3 180.0
C28 C26 N19 C15 175.4 90.1
C36 C26 N19 C15 357.1 269.7
C26 N19 C15 C21 182.6 180.0
O23 C21 N19 C15 180.0 180.0
O17 C15 C8 C10 360.0 360.0
C8 C15 O17 N19 180.8 180.0
O17 C15 N19 C26 2.2 0.1
O17 C15 N19 C21 179.6 180.0
C15 N19 C26 C28 175.4 90.1
C36 C26 C28 N19 178.4 180.4
C28 C26 C36 C34 0.5 359.9
C28 C26 C36 O39 180.3 179.9
C28 C26 N19 C21 358.5 270.1
C26 C28 C30 C32 359.8 359.9
C26 C28 C30 C45 181.0 179.9
C30 C28 C26 H28 180.0 180.2
C15 N19 C26 C36 357.1 269.7
C28 C26 C36 N19 181.6 179.6
C36 C26 C28 C30 359.6 0.1
C36 C26 C28 H28 179.6 179.9
C36 C26 N19 C21 180.2 89.7
C32 C34 C36 C26 359.9 0.1
C34 C36 C26 O39 180.2 180.0
C26 C36 C34 H34 179.9 180.0
C26 C36 O39 HO39 61.2 90.0
C6 C21 N19 C26 178.6 179.9
C26 N19 C15 O17 2.2 0.1
C15 N19 C26 C21 176.9 180.0
C28 C26 N19 C36 178.3 180.4
N19 C26 C28 C30 181.2 179.7
N19 C26 C28 H28 1.2 359.6
N19 C26 C36 C34 178.9 180.3
N19 C26 C36 O39 358.7 0.3
O23 C21 N19 C26 357.4 360.0
C30 C28 C26 C36 359.6 0.1
C30 C28 C26 N19 181.2 179.7
C26 C28 C30 H28 180.0 179.8
C32 C30 C28 C45 178.8 180.0
C28 C30 C32 C34 0.6 0.1
C28 C30 C32 H32 180.6 180.0
C28 C30 C45 C46 213.4 180.0
C28 C30 C45 C44 35.9 360.0
C28 C30 C32 C45 181.1 180.0
C32 C30 C28 H28 179.9 180.1
C32 C30 C45 C46 34.5 360.0
C32 C30 C45 C44 217.0 180.0
C30 C32 C34 C36 359.5 359.9
C34 C32 C30 H32 180.0 180.1
C30 C32 C34 H34 179.6 180.0
C28 C30 C45 C32 178.9 180.0
C45 C30 C28 H28 1.0 0.1
C45 C30 C32 C34 179.5 180.1
C45 C30 C32 H32 359.5 360.0
C41 C46 C45 C30 181.1 180.0
C46 C45 C30 C44 177.5 180.0
C30 C45 C46 H46 1.1 0.0
C30 C45 C44 C43 178.9 180.0
C30 C45 C44 H44 358.9 359.9
C26 C36 C34 C32 359.9 0.1
C34 C32 C30 C45 179.5 180.1
C30 C32 C34 H32 180.0 179.9
C32 C34 C36 O39 180.1 180.0
C36 C34 C32 H34 180.0 179.9
C34 C36 C26 N19 178.9 180.3
C26 C36 C34 O39 179.8 180.0
C36 C34 C32 H32 179.5 180.0
C32 C34 C36 H34 180.0 180.1
C34 C36 O39 HO39 241.0 270.0
O39 C36 C26 N19 358.7 0.3
C26 C36 O39 C34 180.2 180.0
O39 C36 C34 H34 0.1 360.0
C30 C45 C46 C41 181.1 180.0
C46 C41 C42 C43 0.2 0.1
C42 C41 C46 H41 180.0 180.2
C46 C41 C42 H42 180.2 180.0
C41 C46 C45 C44 358.7 360.0
C45 C46 C41 H46 180.0 180.0
C42 C41 C46 C45 0.5 360.0
C46 C41 C42 H41 180.0 179.8
C42 C41 C46 H46 180.6 180.0
C44 C43 C42 C41 359.9 360.0
C41 C42 C43 H43 179.9 180.0
C43 C42 C41 H42 180.0 180.0
O23 C21 C6 C4 0.7 359.9
C6 C21 O23 N19 178.7 180.1
C15 N19 C21 O23 180.0 180.0
C26 N19 C21 O23 357.4 360.0
N19 C21 C6 C4 179.6 180.0
C6 C21 N19 O23 181.2 179.9
C21 N19 C15 O17 179.6 180.0
C15 N19 C21 C26 182.6 180.0
C30 C45 C46 C44 182.4 180.0
C45 C46 C41 C42 0.5 360.0
C45 C46 C41 H41 180.5 179.7
C41 C46 C45 H46 180.0 180.0
C46 C45 C44 C43 1.4 0.0
C46 C45 C44 H44 181.4 179.9
C30 C45 C44 C46 177.5 180.0
C44 C45 C46 H46 178.7 180.0
C45 C44 C43 C42 359.3 360.0
C43 C44 C45 H44 180.0 180.1
C45 C44 C43 H43 179.3 180.0
C41 C42 C43 C44 359.9 360.0
C45 C44 C43 H44 180.0 179.9
C42 C43 C44 H43 180.0 180.0
C44 C43 C42 H42 179.9 180.0
C43 C42 C41 H41 180.2 180.3
C41 C42 C43 H42 180.0 180.0
C42 C43 C44 H44 179.3 180.1
C44 C43 C42 H43 180.0 180.0
C2 C1 H1 C10 180.0 180.2
H1 C1 C2 C4 181.7 179.8
H1 C1 C2 H2 1.6 359.8
H1 C1 C10 C8 179.0 180.2
H1 C1 C10 C13 359.3 0.2
H2 C2 C1 C10 181.6 180.0
C1 C2 H2 C4 180.0 179.9
H2 C2 C1 H1 1.6 359.8
H2 C2 C4 C6 178.5 180.0
H2 C2 C4 H4 358.5 360.0
C10 C13 H13 H13A 120.0 120.0
C10 C13 H13 H13B 240.0 240.0
H13A C13 H13 H13B 120.0 120.0
C10 C13 H13A H13 240.0 240.0
C10 C13 H13A H13B 120.0 120.0
H13 C13 H13A H13B 240.0 240.0
C10 C13 H13B H13 120.0 120.0
C10 C13 H13B H13A 240.0 240.0
H13 C13 H13B H13A 120.0 120.0
H28 C28 C26 C36 179.6 179.9
H28 C28 C26 N19 1.2 359.6
C26 C28 H28 C30 180.0 180.2
H28 C28 C30 C32 179.9 180.1
H28 C28 C30 C45 1.0 0.1
H32 C32 C30 C45 359.5 360.0
C30 C32 H32 C34 180.0 180.1
H32 C32 C34 C36 179.5 180.0
H32 C32 C34 H34 359.5 0.1
C32 C34 H34 C36 180.0 179.9
H34 C34 C32 H32 359.5 0.1
H34 C34 C36 O39 0.1 360.0
C46 C41 H41 C42 180.0 180.2
H41 C41 C46 C45 180.5 179.7
H41 C41 C46 H46 0.6 359.7
H41 C41 C42 C43 180.2 180.3
H41 C41 C42 H42 0.1 0.2
C2 C4 H4 C6 180.0 180.1
H4 C4 C2 H2 358.5 360.0
H46 C46 C41 C42 180.6 180.0
C41 C46 H46 C45 180.0 180.0
H46 C46 C41 H41 0.6 359.7
H46 C46 C45 C44 178.7 180.0
C45 C44 H44 C43 180.0 180.1
H44 C44 C43 C42 179.3 180.1
H44 C44 C43 H43 359.3 0.0
C44 C43 H43 C42 180.0 180.0
H43 C43 C44 H44 359.3 0.0
H43 C43 C42 H42 359.9 0.0
C41 C42 H42 C43 180.0 180.0
H42 C42 C41 H41 0.1 0.2
H42 C42 C43 H43 359.9 0.0