PDB Chemical Component BZ9
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BZ9
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C9 |
1.329 |
1.367 |
| N1 |
HN1 |
1.000 |
0.970 |
| C4 |
N2 |
1.339 |
1.359 |
| C5 |
C4 |
1.418 |
1.397 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
C5 |
1.405 |
1.377 |
| C6 |
H6 |
1.080 |
1.080 |
| C7 |
C6 |
1.426 |
1.387 |
| C7 |
C8 |
1.391 |
1.380 |
| C7 |
H7 |
1.080 |
1.080 |
| C8 |
C3 |
1.382 |
1.387 |
| C8 |
H8 |
1.080 |
1.079 |
| C10 |
C17 |
1.394 |
1.410 |
| C13 |
C14 |
1.370 |
1.393 |
| C13 |
C12 |
1.388 |
1.362 |
| C13 |
H13 |
1.080 |
1.080 |
| C15 |
C10 |
1.388 |
1.404 |
| C15 |
H15 |
1.081 |
1.080 |
| C17 |
O33 |
1.369 |
1.359 |
| C17 |
C18 |
1.394 |
1.366 |
| C20 |
N16 |
1.335 |
1.398 |
| C20 |
C19 |
1.385 |
1.378 |
| C21 |
C22 |
1.407 |
1.396 |
| C21 |
C26 |
1.383 |
1.401 |
| C22 |
C23 |
1.402 |
1.386 |
| C22 |
H22 |
1.080 |
1.080 |
| C24 |
H24 |
1.080 |
1.080 |
| C26 |
N25 |
1.288 |
1.321 |
| C28 |
C21 |
1.379 |
1.481 |
| C28 |
N27 |
1.347 |
1.332 |
| C35 |
H35 |
1.100 |
1.090 |
| C35 |
H35A |
1.100 |
1.090 |
| N34 |
C35 |
1.478 |
1.465 |
| C32 |
N34 |
1.347 |
1.384 |
| C32 |
N27 |
1.326 |
1.324 |
| N31 |
C32 |
1.329 |
1.325 |
| C30 |
N31 |
1.301 |
1.324 |
| C30 |
C29 |
1.390 |
1.383 |
| C30 |
H30 |
1.080 |
1.079 |
| C29 |
C28 |
1.422 |
1.398 |
| C29 |
H29 |
1.080 |
1.080 |
| C23 |
C24 |
1.378 |
1.382 |
| C23 |
H23 |
1.080 |
1.079 |
| N25 |
C24 |
1.345 |
1.320 |
| O33 |
C26 |
1.312 |
1.355 |
| C18 |
C36 |
1.536 |
1.507 |
| C36 |
H36 |
1.099 |
1.090 |
| C36 |
H36A |
1.100 |
1.090 |
| C36 |
H36B |
1.100 |
1.090 |
| C19 |
C18 |
1.393 |
1.392 |
| C19 |
H19 |
1.080 |
1.079 |
| C14 |
C15 |
1.410 |
1.362 |
| C14 |
H14 |
1.080 |
1.080 |
| C12 |
C11 |
1.401 |
1.403 |
| C12 |
H12 |
1.080 |
1.079 |
| C11 |
C10 |
1.397 |
1.416 |
| C11 |
C20 |
1.418 |
1.412 |
| N16 |
HN16 |
1.000 |
0.970 |
| C9 |
N16 |
1.307 |
1.379 |
| N2 |
C9 |
1.345 |
1.310 |
| C3 |
N1 |
1.323 |
1.385 |
| C3 |
C4 |
1.408 |
1.404 |
| C35 |
H221 |
1.100 |
1.090 |
| N34 |
H231 |
0.999 |
0.970 |
Bond Angles for BZ9
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C9 |
N1 |
HN1 |
127.1 |
126.4 |
| N1 |
C9 |
N16 |
123.3 |
125.1 |
| C3 |
N1 |
HN1 |
127.1 |
126.4 |
| C5 |
C4 |
N2 |
131.4 |
133.4 |
| C4 |
N2 |
C9 |
104.9 |
109.6 |
| C6 |
C5 |
H5 |
120.1 |
120.1 |
| C7 |
C6 |
H6 |
121.4 |
119.7 |
| C8 |
C7 |
H7 |
118.4 |
119.8 |
| C7 |
C8 |
C3 |
118.6 |
119.8 |
| C7 |
C8 |
H8 |
120.7 |
120.1 |
| C3 |
C8 |
H8 |
120.7 |
120.1 |
| C15 |
C10 |
C17 |
119.3 |
121.2 |
| C10 |
C17 |
O33 |
118.4 |
120.1 |
| C10 |
C17 |
C18 |
121.4 |
119.9 |
| C14 |
C13 |
C12 |
122.7 |
121.0 |
| C14 |
C13 |
H13 |
118.6 |
119.5 |
| C13 |
C14 |
C15 |
116.9 |
120.9 |
| C13 |
C14 |
H14 |
121.6 |
119.6 |
| C12 |
C13 |
H13 |
118.7 |
119.5 |
| C13 |
C12 |
C11 |
120.3 |
119.6 |
| C13 |
C12 |
H12 |
119.8 |
120.2 |
| C14 |
C15 |
H15 |
119.3 |
120.1 |
| O33 |
C17 |
C18 |
119.9 |
120.1 |
| C17 |
O33 |
C26 |
129.9 |
118.0 |
| C17 |
C18 |
C36 |
121.1 |
119.5 |
| C19 |
C20 |
N16 |
113.3 |
120.3 |
| C11 |
C20 |
N16 |
125.8 |
120.2 |
| C20 |
N16 |
HN16 |
118.5 |
120.0 |
| C20 |
C19 |
C18 |
120.2 |
120.8 |
| C20 |
C19 |
H19 |
119.9 |
119.6 |
| C22 |
C21 |
C26 |
117.5 |
118.8 |
| C21 |
C22 |
C23 |
117.0 |
118.4 |
| C21 |
C22 |
H22 |
121.5 |
120.8 |
| C21 |
C26 |
N25 |
124.8 |
120.5 |
| C23 |
C22 |
H22 |
121.5 |
120.8 |
| C22 |
C23 |
C24 |
120.4 |
119.4 |
| C22 |
C23 |
H23 |
119.8 |
120.3 |
| C23 |
C24 |
H24 |
119.6 |
119.4 |
| N25 |
C24 |
H24 |
119.6 |
119.4 |
| C28 |
N27 |
C32 |
125.6 |
120.6 |
| H35 |
C35 |
H35A |
109.5 |
109.5 |
| N34 |
C35 |
H35 |
109.5 |
109.5 |
| H35 |
C35 |
H221 |
109.4 |
109.5 |
| N34 |
C35 |
H35A |
109.5 |
109.4 |
| H35A |
C35 |
H221 |
109.5 |
109.5 |
| N34 |
C35 |
H221 |
109.5 |
109.5 |
| C32 |
N34 |
H231 |
104.4 |
120.0 |
| C29 |
C30 |
H30 |
116.9 |
120.4 |
| C30 |
C29 |
H29 |
123.6 |
120.8 |
| C18 |
C36 |
H36 |
109.5 |
109.5 |
| C18 |
C36 |
H36A |
109.5 |
109.5 |
| C18 |
C36 |
H36B |
109.4 |
109.5 |
| H36 |
C36 |
H36A |
109.5 |
109.4 |
| H36 |
C36 |
H36B |
109.5 |
109.5 |
| H36A |
C36 |
H36B |
109.5 |
109.5 |
| C11 |
C12 |
H12 |
119.8 |
120.2 |
| C9 |
N16 |
HN16 |
118.5 |
120.0 |
Torsion Angles for BZ9
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
N1 |
C9 |
HN1 |
180.0 |
180.2 |
| C4 |
N2 |
C9 |
N1 |
0.4 |
0.0 |
| N1 |
C9 |
N16 |
HN16 |
219.9 |
6.2 |
| HN1 |
N1 |
C9 |
N16 |
358.2 |
360.0 |
| C5 |
C4 |
N2 |
C9 |
181.9 |
180.0 |
| H5 |
C5 |
C4 |
N2 |
0.6 |
359.9 |
| C6 |
C5 |
C4 |
N2 |
180.6 |
180.0 |
| H6 |
C6 |
C5 |
H5 |
359.1 |
360.0 |
| C7 |
C6 |
C5 |
H5 |
179.1 |
180.1 |
| C8 |
C7 |
C6 |
H6 |
178.0 |
179.6 |
| C3 |
C8 |
C7 |
H8 |
180.0 |
180.5 |
| H7 |
C7 |
C6 |
H6 |
357.9 |
0.0 |
| H7 |
C7 |
C8 |
C3 |
183.6 |
180.2 |
| H7 |
C7 |
C8 |
H8 |
3.6 |
359.7 |
| C8 |
C3 |
N1 |
HN1 |
359.4 |
0.2 |
| C3 |
C8 |
C7 |
H7 |
183.6 |
180.2 |
| C7 |
C8 |
C3 |
H8 |
180.0 |
179.5 |
| H8 |
C8 |
C7 |
H7 |
3.6 |
359.7 |
| C7 |
C8 |
H8 |
C3 |
180.0 |
180.5 |
| O33 |
C17 |
C10 |
C18 |
185.9 |
180.0 |
| C10 |
C17 |
O33 |
C26 |
245.7 |
90.0 |
| C10 |
C17 |
C18 |
C36 |
180.1 |
180.0 |
| C12 |
C13 |
C14 |
H13 |
180.0 |
179.8 |
| C14 |
C13 |
C12 |
C11 |
355.7 |
0.3 |
| C14 |
C13 |
C12 |
H12 |
175.7 |
180.0 |
| C13 |
C14 |
C15 |
H15 |
177.1 |
180.0 |
| C14 |
C13 |
C12 |
H13 |
180.0 |
180.2 |
| C12 |
C13 |
C14 |
C15 |
4.6 |
359.7 |
| C12 |
C13 |
C14 |
H14 |
184.6 |
179.8 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
180.3 |
| C14 |
C13 |
H13 |
C12 |
180.0 |
179.8 |
| H13 |
C13 |
C14 |
C15 |
184.6 |
179.9 |
| H13 |
C13 |
C14 |
H14 |
4.6 |
360.0 |
| H13 |
C13 |
C12 |
C11 |
175.7 |
180.1 |
| H13 |
C13 |
C12 |
H12 |
355.7 |
359.8 |
| C15 |
C10 |
C17 |
O33 |
7.1 |
0.1 |
| C15 |
C10 |
C17 |
C18 |
181.2 |
180.1 |
| H15 |
C15 |
C10 |
C17 |
0.8 |
359.9 |
| C10 |
C17 |
O33 |
C18 |
174.2 |
180.0 |
| O33 |
C17 |
C18 |
C36 |
354.1 |
0.0 |
| C10 |
C17 |
C18 |
O33 |
186.0 |
180.0 |
| C18 |
C17 |
O33 |
C26 |
71.5 |
270.0 |
| C20 |
C19 |
C18 |
C17 |
356.2 |
0.0 |
| C17 |
C18 |
C36 |
H36 |
123.8 |
90.0 |
| C17 |
C18 |
C36 |
H36A |
243.8 |
210.0 |
| C17 |
C18 |
C36 |
H36B |
3.8 |
330.0 |
| N1 |
C9 |
N16 |
C20 |
39.9 |
186.2 |
| N16 |
C20 |
C19 |
C18 |
183.8 |
180.0 |
| N16 |
C20 |
C19 |
H19 |
3.8 |
359.8 |
| C9 |
N16 |
C20 |
HN16 |
180.0 |
180.0 |
| C11 |
C20 |
C19 |
N16 |
179.4 |
180.2 |
| C19 |
C20 |
N16 |
HN16 |
51.9 |
188.7 |
| C22 |
C21 |
C26 |
N25 |
2.1 |
360.0 |
| C23 |
C22 |
C21 |
H22 |
180.0 |
180.1 |
| C21 |
C22 |
C23 |
C24 |
1.8 |
360.0 |
| C21 |
C22 |
C23 |
H23 |
181.8 |
179.9 |
| C17 |
O33 |
C26 |
C21 |
177.6 |
180.0 |
| C26 |
C21 |
C22 |
C23 |
356.8 |
0.0 |
| C26 |
C21 |
C22 |
H22 |
176.8 |
180.0 |
| C23 |
C22 |
C21 |
C26 |
356.8 |
0.0 |
| C21 |
C22 |
C23 |
H22 |
180.0 |
179.9 |
| C22 |
C23 |
C24 |
H24 |
180.9 |
180.1 |
| H22 |
C22 |
C21 |
C26 |
176.8 |
180.0 |
| C21 |
C22 |
H22 |
C23 |
180.0 |
180.1 |
| H22 |
C22 |
C23 |
C24 |
181.8 |
180.1 |
| H22 |
C22 |
C23 |
H23 |
1.8 |
0.0 |
| C17 |
O33 |
C26 |
N25 |
359.8 |
0.0 |
| C26 |
N25 |
C24 |
H24 |
177.8 |
180.0 |
| C28 |
C21 |
C22 |
C23 |
183.0 |
179.7 |
| C28 |
C21 |
C22 |
H22 |
2.9 |
359.6 |
| C28 |
C21 |
C26 |
N25 |
175.3 |
180.3 |
| N34 |
C35 |
H35 |
H35A |
120.0 |
120.0 |
| H35A |
C35 |
H35 |
H221 |
120.0 |
120.0 |
| N34 |
C35 |
H35 |
H221 |
240.0 |
240.0 |
| N34 |
C35 |
H35A |
H35 |
240.0 |
240.0 |
| H35 |
C35 |
H35A |
H221 |
240.0 |
240.0 |
| N34 |
C35 |
H35A |
H221 |
120.0 |
120.0 |
| H35 |
C35 |
N34 |
H35A |
240.0 |
240.0 |
| H35 |
C35 |
N34 |
H221 |
120.0 |
120.0 |
| H35A |
C35 |
N34 |
H221 |
240.0 |
240.0 |
| C28 |
N27 |
C32 |
N34 |
180.9 |
180.1 |
| C32 |
N34 |
C35 |
H35 |
267.9 |
180.0 |
| C32 |
N34 |
C35 |
H35A |
27.9 |
300.0 |
| C32 |
N34 |
C35 |
H221 |
147.9 |
60.0 |
| N27 |
C32 |
N34 |
H231 |
235.9 |
360.0 |
| N31 |
C32 |
N34 |
H231 |
60.7 |
180.0 |
| H30 |
C30 |
C29 |
H29 |
1.5 |
0.3 |
| H29 |
C29 |
C30 |
H30 |
1.5 |
0.3 |
| C24 |
C23 |
C22 |
H22 |
181.8 |
180.1 |
| C22 |
C23 |
C24 |
H23 |
180.0 |
180.0 |
| N25 |
C24 |
C23 |
H24 |
180.0 |
180.0 |
| H23 |
C23 |
C22 |
H22 |
1.8 |
0.0 |
| C22 |
C23 |
H23 |
C24 |
180.0 |
180.0 |
| H23 |
C23 |
C24 |
H24 |
0.9 |
0.1 |
| C21 |
C26 |
N25 |
C24 |
0.7 |
0.0 |
| C23 |
C24 |
N25 |
H24 |
180.0 |
180.0 |
| C26 |
O33 |
C17 |
C18 |
71.5 |
270.0 |
| C20 |
C19 |
C18 |
C36 |
177.7 |
180.0 |
| H36 |
C36 |
C18 |
H36A |
240.0 |
240.1 |
| H36 |
C36 |
C18 |
H36B |
120.0 |
120.0 |
| H36A |
C36 |
C18 |
H36B |
240.0 |
240.0 |
| C18 |
C36 |
H36 |
H36A |
120.0 |
120.0 |
| C18 |
C36 |
H36 |
H36B |
240.0 |
240.0 |
| H36A |
C36 |
H36 |
H36B |
120.0 |
120.0 |
| C18 |
C36 |
H36A |
H36 |
240.0 |
240.0 |
| C18 |
C36 |
H36A |
H36B |
120.0 |
120.0 |
| H36 |
C36 |
H36A |
H36B |
240.0 |
240.0 |
| C18 |
C36 |
H36B |
H36 |
120.0 |
120.0 |
| C18 |
C36 |
H36B |
H36A |
240.0 |
240.0 |
| H36 |
C36 |
H36B |
H36A |
120.0 |
120.0 |
| C18 |
C19 |
C20 |
N16 |
183.8 |
180.0 |
| C20 |
C19 |
C18 |
H19 |
180.0 |
179.7 |
| C19 |
C18 |
C36 |
H36 |
302.2 |
270.0 |
| C19 |
C18 |
C36 |
H36A |
62.2 |
30.0 |
| C19 |
C18 |
C36 |
H36B |
182.2 |
150.0 |
| H19 |
C19 |
C20 |
N16 |
3.8 |
359.8 |
| C20 |
C19 |
H19 |
C18 |
180.0 |
180.3 |
| C15 |
C14 |
C13 |
C12 |
4.6 |
359.7 |
| C15 |
C14 |
C13 |
H13 |
184.6 |
179.9 |
| C13 |
C14 |
C15 |
H14 |
180.0 |
180.1 |
| H14 |
C14 |
C13 |
C12 |
184.6 |
179.8 |
| H14 |
C14 |
C13 |
H13 |
4.6 |
360.0 |
| C13 |
C14 |
H14 |
C15 |
180.0 |
179.9 |
| H14 |
C14 |
C15 |
H15 |
357.1 |
360.0 |
| C11 |
C12 |
C13 |
H13 |
175.7 |
180.1 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
179.7 |
| C12 |
C11 |
C20 |
N16 |
357.4 |
0.2 |
| H12 |
C12 |
C13 |
H13 |
355.7 |
359.8 |
| C13 |
C12 |
H12 |
C11 |
180.0 |
180.3 |
| C13 |
C12 |
C11 |
C20 |
183.6 |
179.5 |
| C19 |
C20 |
C11 |
N16 |
180.7 |
179.8 |
| C11 |
C20 |
N16 |
HN16 |
232.6 |
8.5 |
| C11 |
C20 |
C19 |
H19 |
183.2 |
180.0 |
| N16 |
C9 |
N1 |
HN1 |
358.2 |
360.0 |
| C4 |
N2 |
C9 |
N16 |
181.2 |
180.0 |
| C20 |
N16 |
C9 |
HN16 |
180.0 |
180.0 |
| N2 |
C9 |
N1 |
HN1 |
179.0 |
180.0 |
| N2 |
C9 |
N16 |
HN16 |
39.0 |
186.2 |
| C9 |
N1 |
C3 |
HN1 |
180.0 |
179.8 |
| C4 |
C3 |
N1 |
HN1 |
181.1 |
179.9 |
| H35 |
C35 |
H221 |
H35A |
120.0 |
120.0 |
| N34 |
C35 |
H221 |
H35 |
120.0 |
120.0 |
| N34 |
C35 |
H221 |
H35A |
240.0 |
240.0 |
| H231 |
N34 |
C35 |
H35 |
27.9 |
0.1 |
| H231 |
N34 |
C35 |
H35A |
147.9 |
120.0 |
| H231 |
N34 |
C35 |
H221 |
267.9 |
240.0 |