PDB Chemical Component BZ1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BZ1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C3	C4	1.529	1.531
C3	C2	1.515	1.529
C3	H31	1.100	1.090
C3	H32	1.100	1.090
C9	C10	1.546	1.349
C9	C11	1.541	1.518
C9	C8	1.342	1.395
C10	S2	1.786	1.752
C10	S3	1.798	1.774
C11	C12	1.543	1.522
C11	N1	1.514	1.469
C11	H11	1.100	1.091
C12	N3	1.497	1.474
C12	H121	1.100	1.090
C12	H122	1.100	1.090
S1	N2	1.666	1.656
S1	O3	1.587	1.421
S1	O4	1.581	1.422
S1	C7	1.755	1.762
C4	O1	1.442	1.428
C4	H41	1.100	1.090
C4	H42	1.100	1.090
C5	C6	1.537	1.530
C5	H51	1.100	1.090
C5	H52	1.100	1.090
C5	H53	1.100	1.090
C6	N1	1.498	1.469
C6	H61	1.100	1.091
C6	H62	1.100	1.090
S2	C7	1.768	1.758
N2	HN21	1.000	0.970
N2	HN22	1.000	0.970
C7	C8	1.334	1.329
C8	H8	1.080	1.080
S3	O2	1.585	1.421
S3	O5	1.595	1.421
S3	N3	1.722	1.673
N3	C2	1.486	1.465
N1	HN1	1.000	1.010
C2	H21	1.100	1.090
C2	H22	1.100	1.090
O1	C1	1.451	1.429
C1	H11A	1.100	1.090
C1	H12	1.100	1.090
C1	H13	1.100	1.090

Bond Angles for BZ1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C4	C3	C2	110.7	109.5
C4	C3	H31	109.2	109.5
C4	C3	H32	109.1	109.4
C3	C4	O1	109.8	109.5
C3	C4	H41	109.4	109.4
C3	C4	H42	109.4	109.5
C2	C3	H31	109.1	109.5
C2	C3	H32	109.2	109.5
C3	C2	N3	113.8	109.5
C3	C2	H21	108.4	109.5
C3	C2	H22	108.4	109.5
H31	C3	H32	109.5	109.5
C10	C9	C11	121.9	123.8
C10	C9	C8	109.3	112.8
C9	C10	S2	112.8	110.7
C9	C10	S3	120.5	123.0
C11	C9	C8	128.8	123.4
C9	C11	C12	111.0	112.4
C9	C11	N1	118.0	109.0
C9	C11	H11	107.9	108.9
C9	C8	C7	112.5	116.0
C9	C8	H8	123.8	122.0
S2	C10	S3	126.6	126.4
C10	S2	C7	83.9	90.9
C10	S3	O2	109.9	107.0
C10	S3	O5	113.5	107.0
C10	S3	N3	105.1	103.0
C12	C11	N1	103.4	108.9
C12	C11	H11	107.9	108.8
C11	C12	N3	117.7	110.6
C11	C12	H121	107.4	109.3
C11	C12	H122	107.4	109.2
N1	C11	H11	108.2	108.8
C11	N1	C6	118.6	111.0
C11	N1	HN1	107.2	110.9
N3	C12	H121	107.4	109.3
N3	C12	H122	107.4	109.2
C12	N3	S3	107.2	115.6
C12	N3	C2	119.0	122.2
H121	C12	H122	109.5	109.2
N2	S1	O3	102.0	106.4
N2	S1	O4	105.3	106.4
N2	S1	C7	109.3	107.2
S1	N2	HN21	109.5	120.0
S1	N2	HN22	109.5	120.0
O3	S1	O4	115.8	123.1
O3	S1	C7	117.5	106.4
O4	S1	C7	106.1	106.4
S1	C7	S2	110.1	125.2
S1	C7	C8	128.5	125.2
O1	C4	H41	109.4	109.5
O1	C4	H42	109.4	109.5
C4	O1	C1	121.2	114.0
H41	C4	H42	109.5	109.5
C6	C5	H51	109.5	109.5
C6	C5	H52	109.5	109.5
C6	C5	H53	109.5	109.4
C5	C6	N1	107.4	109.5
C5	C6	H61	110.0	109.4
C5	C6	H62	110.0	109.5
H51	C5	H52	109.5	109.5
H51	C5	H53	109.5	109.5
H52	C5	H53	109.4	109.5
N1	C6	H61	110.0	109.5
N1	C6	H62	110.0	109.5
C6	N1	HN1	107.2	111.1
H61	C6	H62	109.5	109.4
S2	C7	C8	121.4	109.6
HN21	N2	HN22	109.4	119.9
C7	C8	H8	123.8	122.0
O2	S3	O5	109.5	123.7
O2	S3	N3	109.4	107.0
O5	S3	N3	109.2	107.2
S3	N3	C2	114.8	122.2
N3	C2	H21	108.4	109.4
N3	C2	H22	108.4	109.5
H21	C2	H22	109.5	109.4
O1	C1	H11A	109.5	109.4
O1	C1	H12	109.5	109.5
O1	C1	H13	109.5	109.5
H11A	C1	H12	109.5	109.5
H11A	C1	H13	109.5	109.5
H12	C1	H13	109.5	109.5

Torsion Angles for BZ1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C3	C4	H31	239.8	240.0
C2	C3	C4	H32	120.2	120.1
C4	C3	C2	N3	123.0	180.0
C4	C3	C2	H21	243.6	300.0
C4	C3	C2	H22	2.3	59.9
H31	C3	C4	H32	240.3	240.1
O1	C4	C3	H41	240.0	240.0
O1	C4	C3	H42	120.0	120.0
C3	C4	O1	C1	292.0	180.0
H41	C4	C3	H42	240.1	240.1
C4	C3	C2	H31	120.2	120.0
C4	C3	C2	H32	239.8	240.0
C2	C3	C4	O1	249.0	180.0
C2	C3	C4	H41	9.0	300.1
C2	C3	C4	H42	129.0	60.0
H31	C3	C2	H32	119.7	120.0
C12	N3	C2	C3	109.0	85.0
S3	N3	C2	C3	238.1	265.0
N3	C2	C3	H21	239.3	240.0
N3	C2	C3	H22	120.6	120.1
H21	C2	C3	H22	241.3	240.1
C4	C3	H31	C2	238.9	240.0
C4	C3	H31	H32	119.4	119.9
H31	C3	C4	O1	9.2	300.0
H31	C3	C4	H41	129.2	60.1
H31	C3	C4	H42	249.2	180.0
C2	C3	H31	H32	240.6	239.9
H31	C3	C2	N3	2.8	60.0
H31	C3	C2	H21	123.4	180.0
H31	C3	C2	H22	242.1	299.9
C4	C3	H32	C2	121.1	120.0
C4	C3	H32	H31	240.6	240.1
H32	C3	C4	O1	128.8	60.0
H32	C3	C4	H41	248.9	180.0
H32	C3	C4	H42	8.8	299.9
C2	C3	H32	H31	119.4	120.0
H32	C3	C2	N3	243.1	300.0
H32	C3	C2	H21	3.8	60.0
H32	C3	C2	H22	122.5	179.9
C11	C9	C10	C8	178.9	180.2
C10	C9	C11	C12	345.2	334.9
C10	C9	C11	N1	226.1	214.1
C10	C9	C11	H11	103.2	95.6
C10	C9	C8	C7	358.0	359.4
C10	C9	C8	H8	178.0	179.3
S2	C10	C9	S3	182.8	179.5
C9	C10	S2	C7	356.7	359.4
C9	C10	S3	O2	226.7	240.8
C9	C10	S3	O5	103.6	106.3
C9	C10	S3	N3	344.3	353.4
C10	C9	C11	C8	181.3	179.8
C11	C9	C10	S2	182.8	181.0
C11	C9	C10	S3	360.0	1.5
C11	C9	C8	C7	179.1	179.2
C11	C9	C8	H8	359.2	359.1
C12	C11	C9	N1	119.1	120.8
C12	C11	C9	H11	242.0	239.3
C9	C11	C12	N3	55.6	56.5
C9	C11	C12	H121	176.8	176.9
C9	C11	C12	H122	294.4	296.2
N1	C11	C9	H11	122.9	118.5
C9	C11	N1	C6	67.3	205.5
C9	C11	N1	HN1	188.6	329.5
C10	C9	C8	C11	178.8	180.2
C8	C9	C10	S2	3.9	0.8
C8	C9	C10	S3	181.0	181.2
C8	C9	C11	C12	163.9	155.1
C8	C9	C11	N1	44.8	34.3
C8	C9	C11	H11	281.9	275.8
S1	C7	C8	C9	180.4	180.2
S2	C7	C8	C9	359.3	0.2
C7	C8	C9	H8	180.0	180.1
S2	C10	C9	C11	182.8	181.0
S2	C10	C9	C8	3.9	0.8
C9	C10	S2	S3	176.9	180.5
S2	C10	S3	O2	43.4	61.3
S2	C10	S3	O5	280.4	286.8
S2	C10	S3	N3	161.0	174.0
S1	C7	S2	C10	181.6	180.2
C10	S2	C7	C8	2.5	0.3
S3	C10	C9	C11	360.0	1.5
S3	C10	C9	C8	181.0	181.2
C9	C10	S3	S2	183.3	179.5
S3	C10	S2	C7	179.7	178.9
C12	N3	S3	C10	47.0	38.3
O2	S3	C10	O5	123.1	134.5
O2	S3	C10	N3	242.4	247.3
O5	S3	C10	N3	119.3	112.8
C10	S3	N3	C2	272.2	218.2
C12	C11	C9	C8	163.9	155.1
C9	C11	C12	N1	232.5	239.2
C9	C11	C12	H11	118.0	120.7
N1	C11	C12	H11	245.5	241.5
C12	C11	N1	C6	304.4	82.6
C12	C11	N1	HN1	65.7	206.6
N3	C12	C11	H121	238.8	239.6
N3	C12	C11	H122	121.2	120.3
C11	C12	N3	S3	286.0	294.0
C11	C12	N3	C2	58.5	114.0
H121	C12	C11	H122	242.4	240.6
N1	C11	C9	C8	44.8	34.3
C9	C11	N1	C12	123.0	122.9
C9	C11	N1	H11	237.2	241.4
C12	C11	N1	H11	114.2	118.5
N1	C11	C12	N3	183.1	177.3
N1	C11	C12	H121	304.3	297.7
N1	C11	C12	H122	61.9	57.1
C5	C6	N1	C11	262.4	185.0
C11	N1	C6	H61	142.7	65.1
C11	N1	C6	H62	22.1	305.1
C6	N1	C11	HN1	238.7	236.0
H11	C11	C9	C8	281.9	275.8
C9	C11	H11	C12	240.0	237.2
C9	C11	H11	N1	128.7	118.6
C12	C11	H11	N1	248.7	241.5
H11	C11	C12	N3	297.5	295.8
H11	C11	C12	H121	58.7	56.1
H11	C11	C12	H122	176.4	175.5
H11	C11	N1	C6	190.1	324.1
H11	C11	N1	HN1	311.4	88.1
C3	C2	N3	C12	109.0	85.0
C10	S3	N3	C12	47.0	38.3
N3	C12	C11	N1	183.1	177.3
N3	C12	C11	H11	297.5	295.8
C11	C12	N3	H121	121.2	120.4
C11	C12	N3	H122	238.8	239.8
H121	C12	N3	H122	117.6	119.4
O2	S3	N3	C12	164.9	150.9
O5	S3	N3	C12	284.8	285.6
S3	N3	C12	C2	227.5	180.0
C12	N3	C2	H21	348.3	325.0
C12	N3	C2	H22	229.6	205.0
H121	C12	C11	N1	304.3	297.7
H121	C12	C11	H11	58.7	56.1
C11	C12	H121	N3	232.5	238.8
C11	C12	H121	H122	116.2	119.4
N3	C12	H121	H122	243.7	240.6
H121	C12	N3	S3	164.8	173.6
H121	C12	N3	C2	297.3	353.6
H122	C12	C11	N1	61.9	57.1
H122	C12	C11	H11	176.4	175.5
C11	C12	H122	N3	127.5	121.1
C11	C12	H122	H121	243.8	240.6
N3	C12	H122	H121	116.3	119.5
H122	C12	N3	S3	47.2	54.2
H122	C12	N3	C2	179.7	234.2
O3	S1	N2	O4	121.3	227.1
O3	S1	N2	C7	234.9	113.6
O4	S1	N2	C7	113.6	246.5
N2	S1	C7	S2	147.8	270.0
N2	S1	C7	C8	326.8	90.0
HN21	N2	S1	HN22	240.0	179.9
N2	S1	O3	O4	246.3	122.9
N2	S1	O3	C7	119.5	245.9
O3	S1	N2	HN21	180.0	353.5
O3	S1	N2	HN22	300.0	173.6
O4	S1	O3	C7	233.2	123.0
O3	S1	C7	S2	263.3	156.5
O3	S1	C7	C8	82.3	336.4
N2	S1	O4	O3	111.8	237.1
N2	S1	O4	C7	244.1	114.1
O4	S1	N2	HN21	58.8	126.4
O4	S1	N2	HN22	178.7	306.5
O3	S1	O4	C7	132.3	237.0
O4	S1	C7	S2	34.7	23.6
O4	S1	C7	C8	213.7	203.5
C9	C8	C7	S1	180.4	180.2
C10	S2	C7	S1	181.6	180.2
N2	S1	C7	O3	244.5	113.5
N2	S1	C7	O4	113.1	246.5
C7	S1	N2	HN21	305.2	239.9
C7	S1	N2	HN22	65.1	60.0
O3	S1	C7	O4	228.6	132.9
S2	C7	S1	C8	181.0	180.0
S1	C7	C8	H8	0.4	0.2
O1	C4	C3	C2	249.0	180.0
O1	C4	C3	H31	9.2	300.0
O1	C4	C3	H32	128.8	60.0
C3	C4	O1	H41	120.0	120.0
C3	C4	O1	H42	240.0	240.0
H41	C4	O1	H42	119.9	120.0
C4	O1	C1	H11A	180.0	60.0
C4	O1	C1	H12	300.0	180.0
C4	O1	C1	H13	60.0	300.0
H41	C4	C3	C2	9.0	300.1
H41	C4	C3	H31	129.2	60.1
H41	C4	C3	H32	248.9	180.0
C3	C4	H41	O1	239.7	240.0
C3	C4	H41	H42	119.9	119.9
O1	C4	H41	H42	240.1	240.0
H41	C4	O1	C1	172.0	60.0
H42	C4	C3	C2	129.0	60.0
H42	C4	C3	H31	249.2	180.0
H42	C4	C3	H32	8.8	299.9
C3	C4	H42	O1	120.3	120.0
C3	C4	H42	H41	240.1	240.1
O1	C4	H42	H41	119.9	120.0
H42	C4	O1	C1	52.0	300.0
C11	N1	C6	C5	262.4	185.0
H51	C5	C6	H52	240.0	239.9
H51	C5	C6	H53	120.0	120.0
H52	C5	C6	H53	240.1	240.0
N1	C6	C5	H61	240.3	240.0
N1	C6	C5	H62	119.7	120.0
C5	C6	N1	HN1	141.1	61.1
H61	C6	C5	H62	239.4	240.0
C6	C5	H51	H52	120.0	120.0
C6	C5	H51	H53	240.0	240.1
H51	C5	C6	N1	180.0	300.0
H51	C5	C6	H61	299.7	60.0
H51	C5	C6	H62	60.3	180.0
H52	C5	H51	H53	120.0	120.0
C6	C5	H52	H51	240.0	240.0
C6	C5	H52	H53	120.0	120.0
H52	C5	C6	N1	300.0	60.0
H52	C5	C6	H61	59.7	180.0
H52	C5	C6	H62	180.3	300.0
H51	C5	H52	H53	240.0	240.0
C6	C5	H53	H51	120.0	120.0
C6	C5	H53	H52	240.0	240.0
H53	C5	C6	N1	60.0	180.0
H53	C5	C6	H61	179.7	300.0
H53	C5	C6	H62	300.3	60.0
H51	C5	H53	H52	120.0	120.0
C6	N1	C11	H11	190.1	324.1
C11	N1	C6	HN1	121.3	123.9
N1	C6	C5	H51	180.0	300.0
N1	C6	C5	H52	300.0	60.0
N1	C6	C5	H53	60.0	180.0
C5	C6	N1	H61	119.7	120.0
C5	C6	N1	H62	240.3	239.9
H61	C6	N1	H62	120.7	120.0
H61	C6	C5	H51	299.7	60.0
H61	C6	C5	H52	59.7	180.0
H61	C6	C5	H53	179.7	300.0
C5	C6	H61	N1	241.9	240.0
C5	C6	H61	H62	120.9	120.0
N1	C6	H61	H62	239.0	240.0
H61	C6	N1	HN1	21.4	301.1
H62	C6	C5	H51	60.3	180.0
H62	C6	C5	H52	180.3	300.0
H62	C6	C5	H53	300.3	60.0
C5	C6	H62	N1	118.1	120.0
C5	C6	H62	H61	239.1	240.0
N1	C6	H62	H61	121.0	120.0
H62	C6	N1	HN1	260.8	181.2
C9	C8	C7	S2	359.3	0.2
C7	S2	C10	S3	179.7	178.9
S1	C7	S2	C8	179.1	180.0
S2	C7	C8	H8	179.3	180.2
HN21	N2	S1	O3	180.0	353.5
HN21	N2	S1	O4	58.8	126.4
HN21	N2	S1	C7	305.2	239.9
S1	N2	HN21	HN22	120.0	180.1
HN22	N2	S1	O3	300.0	173.6
HN22	N2	S1	O4	178.7	306.5
HN22	N2	S1	C7	65.1	60.0
S1	N2	HN22	HN21	240.0	179.9
C9	C8	C7	H8	180.0	179.9
S1	C7	C8	S2	181.1	180.0
C9	C8	H8	C7	180.0	180.1
C10	S3	O2	O5	234.6	235.0
C10	S3	O2	N3	114.9	109.9
C12	N3	S3	O2	164.9	150.9
O5	S3	O2	N3	240.3	234.9
O2	S3	N3	C2	30.2	330.9
C10	S3	O5	O2	123.3	125.0
C10	S3	O5	N3	243.0	250.0
C12	N3	S3	O5	284.8	285.6
O2	S3	O5	N3	119.8	125.1
O5	S3	N3	C2	150.1	105.5
C3	C2	N3	S3	238.1	265.0
C10	S3	N3	O2	242.0	247.3
C10	S3	N3	O5	122.2	112.7
S3	N3	C12	H121	164.8	173.6
S3	N3	C12	H122	47.2	54.2
C12	N3	S3	C2	134.7	180.0
O2	S3	N3	O5	240.2	225.4
S3	N3	C2	H21	117.4	145.0
S3	N3	C2	H22	358.7	25.1
N3	C2	C3	H31	2.8	60.0
N3	C2	C3	H32	243.1	300.0
C3	C2	N3	H21	120.7	120.0
C3	C2	N3	H22	239.3	239.9
C2	N3	C12	H121	297.3	353.6
C2	N3	C12	H122	179.7	234.2
C12	N3	C2	S3	230.9	180.0
H21	C2	N3	H22	118.7	119.9
HN1	N1	C11	H11	311.4	88.1
C11	N1	HN1	C6	231.8	236.0
HN1	N1	C6	H61	21.4	301.1
HN1	N1	C6	H62	260.8	181.2
H21	C2	C3	H31	123.4	180.0
H21	C2	C3	H32	3.8	60.0
C3	C2	H21	N3	236.0	240.0
C3	C2	H21	H22	118.0	120.0
N3	C2	H21	H22	242.0	240.0
H22	C2	C3	H31	242.1	299.9
H22	C2	C3	H32	122.5	179.9
C3	C2	H22	N3	124.0	120.1
C3	C2	H22	H21	242.0	240.0
N3	C2	H22	H21	118.0	120.0
C1	O1	C4	H41	172.0	60.0
C1	O1	C4	H42	52.0	300.0
H11A	C1	O1	H12	240.0	240.0
H11A	C1	O1	H13	120.0	120.0
H12	C1	O1	H13	240.0	240.0
O1	C1	H11A	H12	120.0	120.0
O1	C1	H11A	H13	240.0	240.0
H12	C1	H11A	H13	120.0	120.0
O1	C1	H12	H11A	240.0	240.0
O1	C1	H12	H13	120.0	120.0
H11A	C1	H12	H13	240.0	240.0
O1	C1	H13	H11A	120.0	120.0
O1	C1	H13	H12	240.0	240.0
H11A	C1	H13	H12	120.0	120.0