PDB Chemical Component BYP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BYP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C22	O21	1.476	1.428
C22	C23	1.558	1.530
C22	H221	1.115	1.089
C22	H222	1.114	1.090
N1	C2	1.356	1.325
N1	C6	1.343	1.324
C2	C3	1.434	1.382
C2	H2	1.104	1.080
C6	N5	1.335	1.325
C6	N14	1.450	1.385
C4	C3	1.421	1.397
C4	N5	1.334	1.328
C4	N7	1.456	1.387
C3	BR	1.911	1.890
C11	C10	1.418	1.383
C11	C12	1.419	1.383
C11	H11	1.104	1.080
C10	C9	1.422	1.381
C10	H10	1.103	1.080
C9	C8	1.427	1.388
C9	H9	1.103	1.080
C8	C13	1.433	1.390
C8	N7	1.457	1.398
C12	C13	1.422	1.380
C12	H12	1.104	1.080
C17	C16	1.421	1.381
C17	C18	1.438	1.386
C17	H17	1.103	1.080
C16	C15	1.419	1.388
C16	H16	1.103	1.080
C13	H13	1.103	1.080
C15	C20	1.437	1.389
C15	N14	1.465	1.399
C18	C19	1.427	1.386
C18	O21	1.421	1.360
C19	C20	1.412	1.381
C19	H19	1.103	1.080
C20	H20	1.103	1.080
N7	H7	1.020	0.969
N14	H14	1.020	0.970
C23	C24	1.571	1.528
C23	O28	1.425	1.429
C23	H23	1.115	1.091
C24	N25	1.512	1.468
C24	H241	1.115	1.090
C24	H242	1.115	1.090
N25	C26	1.492	1.468
N25	C27	1.491	1.469
C26	H261	1.115	1.090
C26	H262	1.115	1.090
C26	H263	1.115	1.090
C27	H271	1.115	1.090
C27	H272	1.115	1.090
C27	H273	1.114	1.090
O28	H28	0.950	0.968

Bond Angles for BYP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O21	C22	C23	108.8	109.5
O21	C22	H221	112.4	109.5
O21	C22	H222	112.5	109.4
C22	O21	C18	116.6	106.8
C23	C22	H221	112.5	109.5
C23	C22	H222	112.4	109.4
C22	C23	C24	110.1	109.6
C22	C23	O28	108.9	109.5
C22	C23	H23	109.3	109.4
H221	C22	H222	98.0	109.5
C2	N1	C6	117.5	120.9
N1	C2	C3	121.2	119.3
N1	C2	H2	119.4	120.4
N1	C6	N5	124.7	121.7
N1	C6	N14	116.6	119.2
C3	C2	H2	119.4	120.3
C2	C3	C4	116.4	118.4
C2	C3	BR	121.4	120.8
N5	C6	N14	118.6	119.2
C6	N5	C4	120.2	120.6
C6	N14	C15	133.9	120.0
C6	N14	H14	113.0	120.0
C3	C4	N5	120.1	119.0
C3	C4	N7	119.0	120.4
C4	C3	BR	122.2	120.8
N5	C4	N7	120.9	120.5
C4	N7	C8	135.2	120.0
C4	N7	H7	112.4	120.1
C10	C11	C12	120.3	120.1
C10	C11	H11	119.9	119.9
C11	C10	C9	120.0	120.1
C11	C10	H10	120.0	119.9
C12	C11	H11	119.9	119.9
C11	C12	C13	119.9	120.1
C11	C12	H12	120.0	119.9
C9	C10	H10	120.0	120.0
C10	C9	C8	120.6	120.0
C10	C9	H9	119.7	120.0
C8	C9	H9	119.7	120.1
C9	C8	C13	118.9	119.8
C9	C8	N7	117.4	120.1
C13	C8	N7	123.7	120.0
C8	C13	C12	120.4	119.9
C8	C13	H13	119.8	120.0
C8	N7	H7	112.4	119.9
C13	C12	H12	120.0	120.0
C12	C13	H13	119.8	120.1
C16	C17	C18	120.4	120.0
C16	C17	H17	119.8	120.0
C17	C16	C15	119.9	120.0
C17	C16	H16	120.1	120.1
C18	C17	H17	119.8	120.0
C17	C18	C19	119.4	120.1
C17	C18	O21	118.9	120.0
C15	C16	H16	120.1	120.0
C16	C15	C20	119.8	119.9
C16	C15	N14	120.4	120.1
C20	C15	N14	119.8	120.1
C15	C20	C19	120.5	120.0
C15	C20	H20	119.7	120.0
C15	N14	H14	113.0	120.0
C19	C18	O21	121.7	120.0
C18	C19	C20	120.0	120.0
C18	C19	H19	120.0	120.0
C20	C19	H19	120.0	120.0
C19	C20	H20	119.8	120.0
C24	C23	O28	109.6	109.5
C24	C23	H23	109.4	109.5
C23	C24	N25	117.0	109.5
C23	C24	H241	109.5	109.4
C23	C24	H242	109.5	109.5
O28	C23	H23	109.4	109.4
C23	O28	H28	109.0	106.7
N25	C24	H241	109.5	109.5
N25	C24	H242	109.5	109.5
C24	N25	C26	116.1	106.7
C24	N25	C27	115.6	106.7
H241	C24	H242	100.7	109.5
C26	N25	C27	113.8	106.7
N25	C26	H261	116.1	109.5
N25	C26	H262	109.8	109.5
N25	C26	H263	109.8	109.4
N25	C27	H271	115.6	109.5
N25	C27	H272	110.0	109.5
N25	C27	H273	110.0	109.5
H261	C26	H262	109.8	109.5
H261	C26	H263	109.8	109.5
H262	C26	H263	100.4	109.5
H271	C27	H272	110.0	109.4
H271	C27	H273	110.0	109.4
H272	C27	H273	100.3	109.5

Torsion Angles for BYP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C23	C22	O21	H221	125.3	120.0
C23	C22	O21	H222	234.7	240.0
O21	C22	C23	C24	321.6	179.9
O21	C22	C23	O28	81.9	300.1
O21	C22	C23	H23	201.4	59.9
H221	C22	O21	H222	109.5	120.0
C17	C18	O21	C22	211.7	180.0
C19	C18	O21	C22	32.1	359.8
O21	C22	C23	H221	234.7	239.9
O21	C22	C23	H222	125.3	120.0
C23	C22	O21	C18	197.7	180.0
H221	C22	C23	H222	250.5	240.0
C24	C23	C22	O28	239.7	239.9
C24	C23	C22	H23	120.2	120.0
C22	C23	C24	N25	201.2	182.3
C22	C23	C24	H241	76.0	62.3
C22	C23	C24	H242	326.5	302.4
O28	C23	C22	H23	240.5	240.2
C22	C23	O28	H28	180.0	299.9
O21	C22	H221	C23	123.3	120.1
O21	C22	H221	H222	241.6	240.0
H221	C22	O21	C18	72.5	60.0
C23	C22	H221	H222	118.4	119.9
H221	C22	C23	C24	86.9	300.0
H221	C22	C23	O28	207.2	60.1
H221	C22	C23	H23	326.7	179.9
O21	C22	H222	C23	236.7	240.0
O21	C22	H222	H221	118.4	120.0
H222	C22	O21	C18	323.0	300.0
C23	C22	H222	H221	241.6	240.0
H222	C22	C23	C24	196.3	60.0
H222	C22	C23	O28	316.6	180.1
H222	C22	C23	H23	76.1	299.9
C2	N1	C6	N5	359.3	0.4
C2	N1	C6	N14	179.7	180.1
C3	C2	N1	H2	180.0	179.9
N1	C2	C3	C4	359.8	0.1
N1	C2	C3	BR	180.0	180.1
C6	N1	C2	C3	0.4	359.9
C6	N1	C2	H2	180.4	180.0
N5	C6	N1	N14	179.6	180.3
N1	C6	N5	C4	0.8	359.4
N1	C6	N14	C15	180.6	5.0
N1	C6	N14	H14	0.6	185.0
C3	C2	N1	C6	0.4	359.9
N1	C2	C3	H2	180.0	180.1
C2	C3	C4	N5	0.3	359.7
C2	C3	C4	N7	179.4	180.0
C4	C3	C2	BR	179.8	180.0
H2	C2	N1	C6	180.4	180.0
N1	C2	H2	C3	180.0	179.9
H2	C2	C3	C4	179.7	180.0
H2	C2	C3	BR	360.0	0.0
N1	C6	N5	N14	180.4	179.7
N5	C6	N14	C15	0.9	184.7
N5	C6	N14	H14	180.9	4.7
C3	C4	N5	C6	359.4	0.6
C6	N5	C4	N7	180.3	180.2
N1	C6	N14	N5	179.7	180.3
N14	C6	N5	C4	180.4	179.7
C16	C15	N14	C6	162.6	34.8
C20	C15	N14	C6	343.1	214.7
C15	N14	C6	H14	180.0	180.0
C4	C3	C2	H2	179.7	180.0
C2	C3	C4	BR	180.2	180.0
C6	N5	C4	C3	359.4	0.6
N5	C4	C3	N7	180.9	179.6
C3	C4	N7	C8	180.6	174.4
C3	C4	N7	H7	0.6	354.3
C4	N5	C6	N14	180.4	179.7
C3	C4	N5	N7	179.1	180.4
N5	C4	C3	BR	180.1	179.7
N5	C4	N7	C8	359.7	354.7
N5	C4	N7	H7	179.7	174.7
C3	C4	N7	N5	180.9	179.6
N7	C4	C3	BR	359.2	0.0
C9	C8	N7	C4	146.5	147.0
C13	C8	N7	C4	327.0	326.7
C8	N7	C4	H7	180.0	180.0
BR	C3	C2	H2	360.0	0.0
C2	C3	BR	C4	179.8	180.0
BR	C3	C4	N5	180.1	179.7
BR	C3	C4	N7	359.2	0.0
C12	C11	C10	H11	180.0	180.0
C10	C11	C12	C13	360.0	359.8
C10	C11	C12	H12	180.0	180.0
C9	C10	C11	H10	180.0	180.0
C11	C10	C9	C8	0.1	360.0
C11	C10	C9	H9	180.1	180.0
C10	C11	C12	H11	180.0	180.0
C12	C11	C10	C9	360.0	360.0
C12	C11	C10	H10	180.0	180.0
C8	C13	C12	C11	359.9	0.5
C13	C12	C11	H12	180.0	179.8
C11	C12	C13	H13	179.9	180.0
C10	C11	H11	C12	180.0	180.0
H11	C11	C10	C9	180.0	180.0
H11	C11	C10	H10	360.0	0.0
H11	C11	C12	C13	180.0	179.8
H11	C11	C12	H12	0.0	360.0
C9	C10	C11	C12	360.0	360.0
C9	C10	C11	H11	180.0	180.0
C11	C10	C9	H10	180.0	180.0
C8	C9	C10	H9	180.0	179.9
C10	C9	C8	C13	359.8	0.3
C10	C9	C8	N7	180.3	180.0
H10	C10	C11	C12	180.0	180.0
H10	C10	C11	H11	360.0	0.0
C11	C10	H10	C9	180.0	180.0
H10	C10	C9	C8	180.1	180.0
H10	C10	C9	H9	0.1	0.0
C4	N7	C8	C9	146.5	147.0
C8	C9	C10	H10	180.1	180.0
C10	C9	C8	H9	180.0	180.1
C13	C8	C9	N7	179.6	180.3
C9	C8	C13	C12	0.2	359.5
C9	C8	C13	H13	180.2	179.9
C9	C8	N7	H7	326.5	327.0
H9	C9	C10	H10	0.1	0.0
C10	C9	H9	C8	180.0	179.9
H9	C9	C8	C13	179.8	180.2
H9	C9	C8	N7	0.3	359.9
C4	N7	C8	C13	327.0	326.7
C11	C12	C13	C8	359.9	0.5
C13	C8	C9	H9	179.8	180.2
C9	C8	C13	N7	180.5	179.7
C13	C8	N7	H7	147.0	146.7
C8	C13	C12	H12	179.9	180.3
C12	C13	C8	H13	180.0	179.6
C4	N7	C8	H7	180.0	180.0
N7	C8	C9	H9	0.3	359.9
C9	C8	N7	C13	179.5	180.3
N7	C8	C13	C12	179.7	179.8
N7	C8	C13	H13	359.7	0.2
C13	C12	C11	H11	180.0	179.8
C11	C12	C13	H12	180.0	180.2
C12	C13	C8	N7	179.7	179.8
C8	C13	C12	H13	180.0	180.5
H12	C12	C11	H11	0.0	360.0
C11	C12	H12	C13	180.0	179.8
H12	C12	C13	H13	359.9	359.8
C18	C17	C16	H17	180.0	180.0
C16	C17	C18	C19	359.9	0.3
C16	C17	C18	O21	180.2	180.0
C15	C16	C17	H16	180.0	179.9
C17	C16	C15	C20	0.1	0.1
C17	C16	C15	N14	180.5	180.0
C22	O21	C18	C17	211.7	180.0
C16	C17	C18	H17	180.0	180.0
C18	C17	C16	C15	0.0	359.9
C18	C17	C16	H16	180.1	180.0
C19	C18	C17	O21	179.6	180.3
C17	C18	C19	C20	0.1	359.5
C17	C18	C19	H19	180.1	180.0
C16	C17	H17	C18	180.0	180.0
H17	C17	C16	C15	180.0	179.9
H17	C17	C16	H16	0.0	360.0
H17	C17	C18	C19	179.9	180.3
H17	C17	C18	O21	0.2	0.0
C6	N14	C15	C16	162.6	34.8
C15	C16	C17	C18	0.0	359.9
C15	C16	C17	H17	180.0	179.9
C17	C16	C15	H16	180.0	180.1
C20	C15	C16	N14	179.5	180.1
C16	C15	C20	C19	359.9	359.7
C16	C15	C20	H20	179.9	179.9
C16	C15	N14	H14	342.6	214.8
H16	C16	C17	C18	180.1	180.0
H16	C16	C17	H17	0.0	360.0
C17	C16	H16	C15	180.0	179.9
H16	C16	C15	C20	180.1	180.0
H16	C16	C15	N14	0.5	360.0
H13	C13	C8	N7	359.7	0.2
C8	C13	H13	C12	180.0	179.5
H13	C13	C12	H12	359.9	359.8
C6	N14	C15	C20	343.1	214.7
C20	C15	C16	H16	180.1	180.0
C16	C15	C20	N14	180.5	179.9
C20	C15	N14	H14	163.1	34.7
C18	C19	C20	C15	0.0	0.5
C15	C20	C19	H19	180.0	180.0
C19	C20	C15	H20	180.0	179.8
C6	N14	C15	H14	180.0	180.0
N14	C15	C16	H16	0.5	360.0
C16	C15	N14	C20	179.5	180.1
N14	C15	C20	C19	179.4	179.7
N14	C15	C20	H20	359.4	360.0
C22	O21	C18	C19	32.1	359.8
C19	C18	C17	H17	179.9	180.3
C17	C18	C19	O21	180.4	179.7
C15	C20	C19	C18	0.0	0.5
C20	C19	C18	H19	180.0	179.5
C18	C19	C20	H20	180.0	180.3
C18	O21	C22	C23	197.7	180.0
C18	O21	C22	H221	72.5	60.0
C18	O21	C22	H222	323.0	300.0
O21	C18	C17	H17	0.2	0.0
C17	C18	O21	C19	179.6	180.3
O21	C18	C19	C20	179.7	179.8
O21	C18	C19	H19	359.7	0.3
C19	C20	C15	N14	179.4	179.7
C15	C20	C19	H20	180.0	180.2
C20	C19	C18	O21	179.7	179.8
C18	C19	C20	H19	180.0	180.5
H19	C19	C18	O21	359.7	0.3
C18	C19	H19	C20	180.0	179.5
H19	C19	C20	H20	360.0	359.8
H20	C20	C15	N14	359.4	360.0
C15	C20	H20	C19	180.0	179.8
H20	C20	C19	H19	360.0	359.8
C4	N7	H7	C8	180.0	180.0
C6	N14	H14	C15	180.0	180.0
C24	C23	C22	H221	86.9	300.0
C24	C23	C22	H222	196.3	60.0
C22	C23	C24	O28	119.9	120.1
C22	C23	C24	H23	239.8	240.0
O28	C23	C24	H23	120.0	119.9
C24	C23	O28	H28	300.6	60.1
N25	C24	C23	H241	125.3	120.0
N25	C24	C23	H242	234.7	239.9
C23	C24	N25	C26	64.1	76.3
C23	C24	N25	C27	287.0	190.1
H241	C24	C23	H242	109.5	119.9
O28	C23	C22	H221	207.2	60.1
O28	C23	C22	H222	316.6	180.1
C22	C23	O28	C24	239.4	239.8
C22	C23	O28	H23	119.5	119.9
C24	C23	O28	H23	240.1	240.0
O28	C23	C24	N25	81.4	62.3
O28	C23	C24	H241	316.1	302.3
O28	C23	C24	H242	206.6	182.3
H23	C23	C22	H221	326.7	179.9
H23	C23	C22	H222	76.1	299.9
C22	C23	H23	C24	120.7	120.1
C22	C23	H23	O28	240.8	240.1
C24	C23	H23	O28	120.1	120.0
H23	C23	C24	N25	321.4	302.4
H23	C23	C24	H241	196.1	182.4
H23	C23	C24	H242	86.7	62.4
H23	C23	O28	H28	60.5	180.0
N25	C24	C23	O28	81.4	62.3
N25	C24	C23	H23	321.4	302.4
C23	C24	N25	H241	234.8	240.0
C23	C24	N25	H242	125.3	120.0
H241	C24	N25	H242	250.5	240.0
C26	N25	C24	C27	137.1	246.2
C24	N25	C26	H261	180.0	180.0
C24	N25	C26	H262	54.7	300.0
C24	N25	C26	H263	305.3	60.0
C24	N25	C27	H271	180.0	61.4
C24	N25	C27	H272	54.8	181.4
C24	N25	C27	H273	305.2	301.5
H241	C24	C23	O28	316.1	302.3
H241	C24	C23	H23	196.1	182.4
C23	C24	H241	N25	129.5	120.1
C23	C24	H241	H242	244.8	240.1
N25	C24	H241	H242	115.3	120.0
H241	C24	N25	C26	189.4	196.3
H241	C24	N25	C27	52.3	310.1
H242	C24	C23	O28	206.6	182.3
H242	C24	C23	H23	86.7	62.4
C23	C24	H242	N25	230.5	239.9
C23	C24	H242	H241	115.2	119.9
N25	C24	H242	H241	244.7	240.0
H242	C24	N25	C26	298.9	316.3
H242	C24	N25	C27	161.7	70.1
C26	N25	C24	H241	189.4	196.3
C26	N25	C24	H242	298.9	316.3
C24	N25	C26	C27	222.1	113.8
C26	N25	C27	H271	41.9	175.2
C26	N25	C27	H272	276.7	295.2
C26	N25	C27	H273	167.2	55.3
H261	C26	N25	H262	125.3	240.0
H261	C26	N25	H263	234.7	120.0
H262	C26	N25	H263	109.5	240.0
C27	N25	C24	H241	52.3	310.1
C27	N25	C24	H242	161.7	70.1
C24	N25	C27	C26	138.1	246.2
C27	N25	C26	H261	317.8	66.2
C27	N25	C26	H262	192.6	186.2
C27	N25	C26	H263	83.1	306.2
H271	C27	N25	H272	125.3	240.0
H271	C27	N25	H273	234.8	120.0
H272	C27	N25	H273	109.5	240.0
H261	C26	N25	C27	317.8	66.2
N25	C26	H261	H262	234.7	120.0
N25	C26	H261	H263	125.2	240.0
H262	C26	H261	H263	250.5	120.0
H262	C26	N25	C27	192.6	186.2
N25	C26	H262	H261	128.8	240.0
N25	C26	H262	H263	244.4	120.0
H261	C26	H262	H263	115.6	240.0
H263	C26	N25	C27	83.1	306.2
N25	C26	H263	H261	231.2	120.0
N25	C26	H263	H262	115.6	240.0
H261	C26	H263	H262	244.4	120.0
N25	C27	H271	H272	234.7	120.1
N25	C27	H271	H273	125.2	240.0
H272	C27	H271	H273	250.5	120.0
N25	C27	H272	H271	128.4	240.0
N25	C27	H272	H273	244.2	120.0
H271	C27	H272	H273	115.8	240.1
N25	C27	H273	H271	231.6	120.0
N25	C27	H273	H272	115.8	239.9
H271	C27	H273	H272	244.2	119.9
H28	O28	C23	H23	60.5	180.0