PDB Chemical Component BR5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BR5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CA1 CB2 1.441 1.514
CA1 HA11 1.115 1.093
CA1 HA12 1.115 1.096
CA1 HA13 1.115 1.095
CB2 O 1.418 1.421
CB2 HB21 1.114 1.094
CB2 HB22 1.116 1.094
O CZ2 1.394 1.421
CZ2 CA2 1.532 1.515
CZ2 HZ21 1.114 1.094
CZ2 HZ22 1.115 1.094
CA2 P 1.754 1.811
CA2 HA21 1.115 1.095
CA2 HA22 1.116 1.094
P OP1 1.530 1.522
P OP2 1.502 1.522
HP1 P 1.420 1.416

Bond Angles for BR5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CB2 CA1 HA11 100.4 110.9
CB2 CA1 HA12 115.7 110.7
CB2 CA1 HA13 115.7 110.6
CA1 CB2 O 100.4 109.0
CA1 CB2 HB21 115.7 110.5
CA1 CB2 HB22 115.6 110.5
HA11 CA1 HA12 115.7 108.8
HA11 CA1 HA13 115.6 108.9
HA12 CA1 HA13 94.7 106.9
O CB2 HB21 115.7 108.8
O CB2 HB22 115.7 108.8
CB2 O CZ2 124.7 111.5
HB21 CB2 HB22 94.8 109.2
O CZ2 CA2 120.1 109.0
O CZ2 HZ21 108.4 108.4
O CZ2 HZ22 108.4 108.7
CA2 CZ2 HZ21 108.4 110.5
CA2 CZ2 HZ22 108.4 110.9
CZ2 CA2 P 115.5 112.4
CZ2 CA2 HA21 110.0 110.6
CZ2 CA2 HA22 110.0 110.0
HZ21 CZ2 HZ22 101.6 109.4
P CA2 HA21 110.0 107.4
P CA2 HA22 110.0 107.7
CA2 P OP1 111.4 105.6
CA2 P OP2 113.6 105.6
HA21 CA2 HA22 100.2 108.6
OP1 P OP2 113.5 118.5

Torsion Angles for BR5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HA11 CA1 CB2 HA12 234.7 239.2
HA11 CA1 CB2 HA13 125.2 120.9
HA12 CA1 CB2 HA13 250.5 241.8
O CB2 CA1 HB21 234.7 119.5
O CB2 CA1 HB22 125.2 240.4
CA1 CB2 O CZ2 159.3 180.0
HB21 CB2 CA1 HB22 250.5 120.9
CB2 CA1 HA11 HA12 125.3 121.9
CB2 CA1 HA11 HA13 234.8 238.0
HA11 CA1 CB2 O 180.0 180.0
HA11 CA1 CB2 HB21 305.2 60.5
HA11 CA1 CB2 HB22 54.7 299.6
HA12 CA1 HA11 HA13 109.5 116.1
CB2 CA1 HA12 HA11 243.0 237.9
CB2 CA1 HA12 HA13 121.5 120.5
HA12 CA1 CB2 O 305.3 300.8
HA12 CA1 CB2 HB21 70.6 181.3
HA12 CA1 CB2 HB22 180.1 60.4
HA11 CA1 HA12 HA13 238.5 242.6
CB2 CA1 HA13 HA11 116.9 122.1
CB2 CA1 HA13 HA12 238.5 239.5
HA13 CA1 CB2 O 54.8 59.1
HA13 CA1 CB2 HB21 180.0 299.6
HA13 CA1 CB2 HB22 289.5 178.6
HA11 CA1 HA13 HA12 121.5 117.3
O CB2 CA1 HA11 180.0 180.0
O CB2 CA1 HA12 305.3 300.8
O CB2 CA1 HA13 54.8 59.1
CA1 CB2 O HB21 125.3 239.5
CA1 CB2 O HB22 234.8 120.6
HB21 CB2 O HB22 109.5 241.1
CB2 O CZ2 CA2 181.8 179.8
CB2 O CZ2 HZ21 307.1 300.1
CB2 O CZ2 HZ22 56.6 58.9
HB21 CB2 CA1 HA11 305.2 60.5
HB21 CB2 CA1 HA12 70.6 181.3
HB21 CB2 CA1 HA13 180.0 299.6
CA1 CB2 HB21 O 243.0 119.6
CA1 CB2 HB21 HB22 121.5 238.3
O CB2 HB21 HB22 238.5 118.7
HB21 CB2 O CZ2 34.1 300.5
HB22 CB2 CA1 HA11 54.7 299.6
HB22 CB2 CA1 HA12 180.1 60.4
HB22 CB2 CA1 HA13 289.5 178.6
CA1 CB2 HB22 O 116.9 240.3
CA1 CB2 HB22 HB21 238.5 121.7
O CB2 HB22 HB21 121.6 241.4
HB22 CB2 O CZ2 284.5 59.4
CZ2 O CB2 HB21 34.1 300.5
CZ2 O CB2 HB22 284.5 59.4
CA2 CZ2 O HZ21 234.7 239.7
CA2 CZ2 O HZ22 125.2 121.0
O CZ2 CA2 P 73.8 299.9
O CZ2 CA2 HA21 199.1 60.0
O CZ2 CA2 HA22 308.6 179.9
HZ21 CZ2 O HZ22 250.5 241.2
O CZ2 CA2 HZ21 125.3 119.0
O CZ2 CA2 HZ22 234.8 240.4
HZ21 CZ2 CA2 HZ22 109.5 121.5
P CA2 CZ2 HA21 234.7 239.9
P CA2 CZ2 HA22 125.3 120.0
CZ2 CA2 P OP1 34.5 176.8
CZ2 CA2 P OP2 164.2 303.1
HA21 CA2 CZ2 HA22 250.6 240.1
O CZ2 HZ21 CA2 228.1 240.7
O CZ2 HZ21 HZ22 114.0 118.3
CA2 CZ2 HZ21 HZ22 245.9 237.7
HZ21 CZ2 CA2 P 308.6 181.0
HZ21 CZ2 CA2 HA21 73.9 301.1
HZ21 CZ2 CA2 HA22 183.3 61.0
O CZ2 HZ22 CA2 131.9 119.8
O CZ2 HZ22 HZ21 245.9 241.9
CA2 CZ2 HZ22 HZ21 114.1 122.1
HZ22 CZ2 CA2 P 199.1 59.5
HZ22 CZ2 CA2 HA21 324.4 179.6
HZ22 CZ2 CA2 HA22 73.8 299.5
P CA2 CZ2 HZ21 308.6 181.0
P CA2 CZ2 HZ22 199.1 59.5
CZ2 CA2 P HA21 125.3 121.9
CZ2 CA2 P HA22 234.7 238.7
HA21 CA2 P HA22 109.5 116.8
OP1 P CA2 OP2 230.3 233.7
HA21 CA2 CZ2 HZ21 73.9 301.1
HA21 CA2 CZ2 HZ22 324.4 179.6
CZ2 CA2 HA21 P 231.7 237.0
CZ2 CA2 HA21 HA22 115.8 120.8
P CA2 HA21 HA22 244.2 243.8
HA21 CA2 P OP1 269.2 54.9
HA21 CA2 P OP2 38.9 181.2
HA22 CA2 CZ2 HZ21 183.3 61.0
HA22 CA2 CZ2 HZ22 73.8 299.5
CZ2 CA2 HA22 P 128.3 122.8
CZ2 CA2 HA22 HA21 244.2 238.8
P CA2 HA22 HA21 115.8 116.0
HA22 CA2 P OP1 159.8 298.2
HA22 CA2 P OP2 289.5 64.5
OP1 P CA2 HA21 269.2 54.9
OP1 P CA2 HA22 159.8 298.2
CA2 P OP1 OP2 129.7 118.0
OP2 P CA2 HA21 38.9 181.2
OP2 P CA2 HA22 289.5 64.5
CA2 P OP2 OP1 231.4 242.0