PDB Chemical Component BQ5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BQ5
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C16 |
C15 |
1.397 |
1.383 |
| C16 |
C14 |
1.397 |
1.383 |
| C15 |
C12 |
1.398 |
1.382 |
| C14 |
C13 |
1.399 |
1.382 |
| C12 |
C6 |
1.407 |
1.388 |
| C13 |
C6 |
1.404 |
1.388 |
| C6 |
N1 |
1.354 |
1.402 |
| N1 |
N2 |
1.242 |
1.400 |
| N1 |
C3 |
1.337 |
1.355 |
| C8 |
C3 |
1.538 |
1.513 |
| C8 |
C11 |
1.533 |
1.545 |
| N2 |
C5 |
1.334 |
1.308 |
| C3 |
C4 |
1.381 |
1.351 |
| C5 |
C4 |
1.385 |
1.403 |
| C5 |
C9 |
1.534 |
1.507 |
| C4 |
C7 |
1.537 |
1.514 |
| C11 |
C7 |
1.529 |
1.545 |
| N10 |
C9 |
1.458 |
1.469 |
| C7 |
H1 |
1.100 |
1.090 |
| C7 |
H2 |
1.100 |
1.090 |
| C8 |
H3 |
1.100 |
1.089 |
| C8 |
H4 |
1.100 |
1.090 |
| C13 |
H5 |
1.080 |
1.080 |
| C15 |
H6 |
1.079 |
1.079 |
| C12 |
H7 |
1.081 |
1.079 |
| C16 |
H8 |
1.080 |
1.080 |
| C14 |
H9 |
1.080 |
1.080 |
| C11 |
H10 |
1.100 |
1.090 |
| C11 |
H11 |
1.100 |
1.090 |
| C9 |
H12 |
1.100 |
1.090 |
| C9 |
H13 |
1.100 |
1.090 |
| N10 |
H14 |
1.000 |
1.009 |
| N10 |
H15 |
1.000 |
1.009 |
Bond Angles for BQ5
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C16 |
C15 |
H6 |
120.0 |
120.0 |
| C14 |
C16 |
H8 |
120.2 |
119.9 |
| C16 |
C14 |
H9 |
119.9 |
120.0 |
| C12 |
C15 |
H6 |
120.0 |
120.0 |
| C15 |
C12 |
H7 |
119.5 |
120.1 |
| C14 |
C13 |
H5 |
119.6 |
120.0 |
| C6 |
N1 |
N2 |
124.0 |
126.1 |
| C6 |
N1 |
C3 |
124.3 |
126.0 |
| N2 |
N1 |
C3 |
111.7 |
107.9 |
| N1 |
N2 |
C5 |
110.0 |
108.2 |
| N1 |
C3 |
C8 |
145.1 |
142.0 |
| N1 |
C3 |
C4 |
106.3 |
107.7 |
| C3 |
C8 |
C11 |
104.9 |
105.0 |
| C3 |
C8 |
H3 |
110.6 |
110.4 |
| C3 |
C8 |
H4 |
110.6 |
110.4 |
| C11 |
C8 |
H3 |
110.6 |
110.3 |
| C11 |
C8 |
H4 |
110.6 |
110.3 |
| C8 |
C11 |
H10 |
111.0 |
110.9 |
| C8 |
C11 |
H11 |
111.1 |
110.9 |
| N2 |
C5 |
C9 |
126.8 |
125.9 |
| C5 |
C4 |
C7 |
145.2 |
141.9 |
| C5 |
C9 |
H12 |
109.4 |
109.5 |
| C5 |
C9 |
H13 |
109.3 |
109.5 |
| C4 |
C7 |
H1 |
110.7 |
110.3 |
| C4 |
C7 |
H2 |
110.7 |
110.3 |
| C11 |
C7 |
H1 |
110.7 |
110.3 |
| C11 |
C7 |
H2 |
110.8 |
110.4 |
| N10 |
C9 |
H12 |
109.4 |
109.5 |
| N10 |
C9 |
H13 |
109.4 |
109.5 |
| H1 |
C7 |
H2 |
109.5 |
110.3 |
| H3 |
C8 |
H4 |
109.4 |
110.4 |
| H10 |
C11 |
H11 |
109.4 |
110.9 |
| H12 |
C9 |
H13 |
109.5 |
109.5 |
| H14 |
N10 |
H15 |
109.5 |
111.0 |
Torsion Angles for BQ5
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
C15 |
C16 |
H6 |
180.0 |
180.0 |
| C16 |
C15 |
C12 |
H7 |
180.3 |
180.0 |
| C14 |
C16 |
C15 |
H6 |
179.8 |
180.3 |
| C16 |
C14 |
C13 |
H5 |
180.2 |
180.0 |
| C16 |
C15 |
C12 |
H6 |
180.0 |
180.0 |
| C12 |
C6 |
N1 |
N2 |
227.0 |
144.8 |
| C12 |
C6 |
N1 |
C3 |
46.6 |
324.4 |
| C13 |
C6 |
N1 |
N2 |
46.6 |
325.0 |
| C13 |
C6 |
N1 |
C3 |
226.2 |
144.7 |
| N2 |
N1 |
C6 |
C3 |
180.4 |
180.3 |
| C6 |
N1 |
N2 |
C5 |
179.8 |
179.7 |
| C6 |
N1 |
C3 |
C8 |
0.5 |
0.2 |
| C6 |
N1 |
C3 |
C4 |
180.4 |
180.3 |
| C6 |
N1 |
N2 |
C3 |
179.6 |
179.7 |
| N2 |
N1 |
C3 |
C8 |
180.1 |
180.0 |
| N2 |
N1 |
C3 |
C4 |
360.0 |
0.0 |
| N1 |
N2 |
C5 |
C9 |
179.8 |
180.0 |
| C6 |
N1 |
C3 |
N2 |
180.4 |
180.3 |
| C3 |
N1 |
N2 |
C5 |
0.2 |
0.0 |
| N1 |
C3 |
C8 |
C11 |
161.3 |
163.1 |
| N1 |
C3 |
C8 |
H3 |
280.6 |
282.0 |
| N1 |
C3 |
C8 |
H4 |
42.0 |
44.3 |
| N1 |
C3 |
C8 |
C4 |
179.9 |
180.1 |
| C11 |
C8 |
C3 |
H3 |
240.7 |
241.1 |
| C11 |
C8 |
C3 |
H4 |
119.3 |
118.8 |
| C3 |
C8 |
C11 |
H10 |
147.8 |
267.6 |
| C3 |
C8 |
C11 |
H11 |
269.8 |
143.9 |
| H3 |
C8 |
C3 |
H4 |
238.6 |
237.7 |
| C3 |
C8 |
C11 |
H3 |
119.3 |
118.9 |
| C3 |
C8 |
C11 |
H4 |
240.7 |
241.1 |
| C8 |
C11 |
C7 |
H1 |
212.4 |
215.4 |
| C8 |
C11 |
C7 |
H2 |
90.7 |
93.2 |
| H3 |
C8 |
C11 |
H4 |
121.4 |
122.2 |
| H10 |
C11 |
C8 |
H11 |
238.0 |
123.7 |
| C5 |
N2 |
N1 |
C3 |
0.2 |
0.0 |
| N2 |
C5 |
C9 |
H12 |
177.5 |
29.9 |
| N2 |
C5 |
C9 |
H13 |
297.4 |
149.9 |
| N1 |
C3 |
C4 |
C8 |
180.1 |
180.0 |
| C3 |
C4 |
C7 |
H1 |
137.4 |
135.8 |
| C3 |
C4 |
C7 |
H2 |
259.0 |
257.9 |
| N1 |
N2 |
C5 |
C4 |
359.8 |
360.0 |
| N1 |
C3 |
C4 |
C5 |
359.9 |
359.9 |
| C5 |
C4 |
C7 |
H1 |
318.1 |
315.9 |
| C5 |
C4 |
C7 |
H2 |
79.7 |
78.0 |
| C9 |
C5 |
C4 |
C7 |
359.5 |
359.9 |
| N10 |
C9 |
C5 |
H12 |
240.0 |
240.0 |
| N10 |
C9 |
C5 |
H13 |
120.1 |
120.0 |
| H12 |
C9 |
C5 |
H13 |
240.1 |
240.0 |
| N1 |
C3 |
C4 |
C7 |
180.3 |
180.0 |
| C11 |
C7 |
C4 |
H1 |
240.8 |
241.1 |
| C11 |
C7 |
C4 |
H2 |
119.2 |
119.0 |
| H1 |
C7 |
C4 |
H2 |
238.4 |
237.9 |
| C4 |
C7 |
C11 |
H1 |
119.1 |
118.9 |
| C4 |
C7 |
C11 |
H2 |
240.8 |
241.1 |
| H1 |
C7 |
C11 |
H2 |
121.7 |
122.2 |
| C5 |
C9 |
N10 |
H12 |
120.1 |
120.0 |
| C5 |
C9 |
N10 |
H13 |
240.0 |
240.0 |
| H12 |
C9 |
N10 |
H13 |
119.9 |
120.1 |
| C4 |
C7 |
H1 |
H2 |
122.4 |
122.1 |
| C11 |
C7 |
H1 |
H2 |
237.6 |
237.7 |
| C4 |
C7 |
H2 |
H1 |
237.6 |
237.9 |
| C11 |
C7 |
H2 |
H1 |
122.4 |
122.2 |
| C3 |
C8 |
H3 |
C11 |
244.2 |
244.4 |
| C3 |
C8 |
H3 |
H4 |
122.1 |
122.3 |
| C11 |
C8 |
H3 |
H4 |
237.9 |
237.9 |
| H3 |
C8 |
C11 |
H10 |
28.5 |
148.7 |
| H3 |
C8 |
C11 |
H11 |
150.5 |
25.0 |
| C3 |
C8 |
H4 |
C11 |
115.8 |
115.5 |
| C3 |
C8 |
H4 |
H3 |
237.9 |
237.7 |
| C11 |
C8 |
H4 |
H3 |
122.1 |
122.1 |
| H4 |
C8 |
C11 |
H10 |
267.1 |
26.5 |
| H4 |
C8 |
C11 |
H11 |
29.1 |
262.8 |
| H6 |
C15 |
C12 |
H7 |
0.3 |
0.0 |
| H7 |
C12 |
C15 |
H6 |
0.3 |
0.0 |
| H8 |
C16 |
C15 |
H6 |
359.8 |
359.9 |
| H8 |
C16 |
C14 |
H9 |
0.1 |
0.3 |
| H9 |
C14 |
C16 |
H8 |
0.1 |
0.3 |
| H9 |
C14 |
C13 |
H5 |
0.1 |
359.7 |
| H10 |
C11 |
C8 |
H3 |
28.5 |
148.7 |
| H10 |
C11 |
C8 |
H4 |
267.1 |
26.5 |
| C8 |
C11 |
H10 |
H11 |
123.0 |
236.3 |
| H10 |
C11 |
C7 |
H1 |
93.4 |
333.5 |
| H10 |
C11 |
C7 |
H2 |
331.7 |
211.3 |
| H11 |
C11 |
C8 |
H3 |
150.5 |
25.0 |
| H11 |
C11 |
C8 |
H4 |
29.1 |
262.8 |
| C8 |
C11 |
H11 |
H10 |
237.0 |
123.7 |
| H11 |
C11 |
C7 |
H1 |
331.4 |
97.2 |
| H11 |
C11 |
C7 |
H2 |
209.7 |
335.0 |
| C5 |
C9 |
H12 |
H13 |
119.8 |
120.0 |
| N10 |
C9 |
H12 |
H13 |
240.2 |
239.9 |
| C5 |
C9 |
H13 |
H12 |
240.2 |
240.0 |
| N10 |
C9 |
H13 |
H12 |
119.8 |
120.0 |
| H14 |
N10 |
C9 |
H12 |
59.9 |
296.1 |
| H14 |
N10 |
C9 |
H13 |
300.0 |
176.0 |
| H15 |
N10 |
C9 |
H12 |
179.9 |
60.0 |
| H15 |
N10 |
C9 |
H13 |
60.0 |
299.9 |