PDB Chemical Component BPY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BPY
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CK1 |
CK2 |
1.482 |
1.394 |
CK1 |
CK6 |
1.467 |
1.380 |
CK1 |
HCK1 |
1.104 |
1.080 |
CK2 |
CK3 |
1.473 |
1.395 |
CK2 |
CK7 |
1.443 |
1.483 |
CK3 |
CK4 |
1.457 |
1.390 |
CK3 |
OK2 |
1.343 |
1.360 |
CK4 |
CK5 |
1.456 |
1.385 |
CK4 |
OK1 |
1.367 |
1.359 |
CK5 |
CK6 |
1.444 |
1.383 |
CK5 |
HCK5 |
1.103 |
1.080 |
CK6 |
HCK6 |
1.104 |
1.079 |
CK7 |
CK8 |
1.486 |
1.393 |
CK7 |
CKC |
1.487 |
1.393 |
CK8 |
CK9 |
1.482 |
1.380 |
CK8 |
HCK8 |
1.103 |
1.080 |
CK9 |
CKA |
1.480 |
1.383 |
CK9 |
HCK9 |
1.102 |
1.080 |
CKA |
CKB |
1.480 |
1.382 |
CKA |
HC10 |
1.103 |
1.080 |
CKB |
CKC |
1.474 |
1.380 |
CKB |
HC11 |
1.103 |
1.080 |
CKC |
HC12 |
1.104 |
1.080 |
OK1 |
H0K1 |
0.950 |
0.966 |
OK2 |
HOK2 |
0.949 |
0.967 |
Bond Angles for BPY
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CK2 |
CK1 |
CK6 |
120.4 |
120.1 |
CK2 |
CK1 |
HCK1 |
120.3 |
120.0 |
CK1 |
CK2 |
CK3 |
119.0 |
119.7 |
CK1 |
CK2 |
CK7 |
125.2 |
120.1 |
CK6 |
CK1 |
HCK1 |
119.2 |
120.0 |
CK1 |
CK6 |
CK5 |
118.2 |
120.2 |
CK1 |
CK6 |
HCK6 |
121.7 |
119.9 |
CK3 |
CK2 |
CK7 |
115.9 |
120.2 |
CK2 |
CK3 |
CK4 |
120.9 |
119.8 |
CK2 |
CK3 |
OK2 |
121.8 |
120.1 |
CK2 |
CK7 |
CK8 |
118.1 |
120.1 |
CK2 |
CK7 |
CKC |
121.8 |
120.1 |
CK4 |
CK3 |
OK2 |
117.3 |
120.1 |
CK3 |
CK4 |
CK5 |
118.1 |
119.9 |
CK3 |
CK4 |
OK1 |
121.1 |
120.0 |
CK3 |
OK2 |
HOK2 |
121.8 |
106.8 |
CK5 |
CK4 |
OK1 |
120.8 |
120.0 |
CK4 |
CK5 |
CK6 |
123.4 |
120.3 |
CK4 |
CK5 |
HCK5 |
118.8 |
119.9 |
CK4 |
OK1 |
H0K1 |
121.0 |
106.8 |
CK6 |
CK5 |
HCK5 |
117.8 |
119.8 |
CK5 |
CK6 |
HCK6 |
120.2 |
119.9 |
CK8 |
CK7 |
CKC |
120.1 |
119.7 |
CK7 |
CK8 |
CK9 |
118.7 |
119.9 |
CK7 |
CK8 |
HCK8 |
120.8 |
120.1 |
CK7 |
CKC |
CKB |
121.5 |
119.9 |
CK7 |
CKC |
HC12 |
119.7 |
120.1 |
CK9 |
CK8 |
HCK8 |
120.5 |
120.0 |
CK8 |
CK9 |
CKA |
120.3 |
120.1 |
CK8 |
CK9 |
HCK9 |
119.9 |
120.0 |
CKA |
CK9 |
HCK9 |
119.8 |
119.9 |
CK9 |
CKA |
CKB |
121.6 |
120.3 |
CK9 |
CKA |
HC10 |
119.2 |
119.9 |
CKB |
CKA |
HC10 |
119.2 |
119.9 |
CKA |
CKB |
CKC |
117.8 |
120.1 |
CKA |
CKB |
HC11 |
121.3 |
120.0 |
CKC |
CKB |
HC11 |
120.8 |
119.9 |
CKB |
CKC |
HC12 |
118.8 |
120.1 |
Torsion Angles for BPY
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CK6 |
CK1 |
CK2 |
HCK1 |
180.0 |
180.0 |
CK2 |
CK1 |
CK6 |
CK5 |
359.9 |
359.9 |
CK2 |
CK1 |
CK6 |
HCK6 |
179.9 |
180.0 |
CK3 |
CK2 |
CK1 |
CK7 |
180.1 |
179.9 |
CK1 |
CK2 |
CK3 |
CK4 |
0.2 |
0.4 |
CK1 |
CK2 |
CK3 |
OK2 |
180.2 |
180.0 |
CK1 |
CK2 |
CK7 |
CK8 |
245.0 |
60.1 |
CK1 |
CK2 |
CK7 |
CKC |
64.5 |
239.8 |
CK2 |
CK1 |
CK6 |
HCK1 |
180.0 |
180.0 |
CK6 |
CK1 |
CK2 |
CK3 |
359.9 |
359.9 |
CK6 |
CK1 |
CK2 |
CK7 |
179.9 |
180.0 |
CK4 |
CK5 |
CK6 |
CK1 |
0.1 |
359.9 |
CK1 |
CK6 |
CK5 |
HCK5 |
180.1 |
180.0 |
CK5 |
CK6 |
CK1 |
HCK6 |
180.0 |
180.0 |
CK2 |
CK1 |
HCK1 |
CK6 |
180.0 |
180.0 |
HCK1 |
CK1 |
CK2 |
CK3 |
179.9 |
179.8 |
HCK1 |
CK1 |
CK2 |
CK7 |
359.8 |
360.0 |
HCK1 |
CK1 |
CK6 |
CK5 |
179.9 |
180.0 |
HCK1 |
CK1 |
CK6 |
HCK6 |
359.9 |
360.0 |
CK3 |
CK2 |
CK1 |
CK6 |
359.9 |
359.9 |
CK3 |
CK2 |
CK1 |
HCK1 |
179.9 |
179.8 |
CK1 |
CK2 |
CK3 |
CK7 |
179.9 |
180.1 |
CK3 |
CK2 |
CK7 |
CK8 |
64.9 |
240.2 |
CK3 |
CK2 |
CK7 |
CKC |
244.4 |
59.9 |
CK4 |
CK3 |
CK2 |
OK2 |
180.0 |
180.5 |
CK2 |
CK3 |
CK4 |
CK5 |
359.8 |
359.4 |
CK2 |
CK3 |
CK4 |
OK1 |
180.0 |
179.8 |
CK2 |
CK3 |
OK2 |
HOK2 |
180.0 |
89.9 |
CK7 |
CK2 |
CK1 |
CK6 |
179.9 |
180.0 |
CK7 |
CK2 |
CK1 |
HCK1 |
359.8 |
360.0 |
CK1 |
CK2 |
CK7 |
CK3 |
180.1 |
179.9 |
CK7 |
CK2 |
CK3 |
CK4 |
180.3 |
180.3 |
CK7 |
CK2 |
CK3 |
OK2 |
0.3 |
359.8 |
CK8 |
CK7 |
CK2 |
CKC |
180.5 |
180.3 |
CK2 |
CK7 |
CK8 |
CK9 |
179.6 |
180.0 |
CK2 |
CK7 |
CK8 |
HCK8 |
359.7 |
359.9 |
CK2 |
CK7 |
CKC |
CKB |
180.4 |
179.7 |
CK2 |
CK7 |
CKC |
HC12 |
0.4 |
0.3 |
CK4 |
CK3 |
CK2 |
CK7 |
180.3 |
180.3 |
CK2 |
CK3 |
CK4 |
OK2 |
180.0 |
179.5 |
CK4 |
CK3 |
OK2 |
HOK2 |
359.9 |
269.5 |
CK5 |
CK4 |
CK3 |
OK1 |
179.8 |
179.6 |
CK3 |
CK4 |
CK5 |
CK6 |
0.1 |
0.4 |
CK3 |
CK4 |
CK5 |
HCK5 |
180.1 |
180.3 |
CK3 |
CK4 |
OK1 |
H0K1 |
179.9 |
269.7 |
OK2 |
CK3 |
CK2 |
CK7 |
0.3 |
359.8 |
CK2 |
CK3 |
OK2 |
CK4 |
180.0 |
180.5 |
OK2 |
CK3 |
CK4 |
CK5 |
179.8 |
179.9 |
OK2 |
CK3 |
CK4 |
OK1 |
0.0 |
0.3 |
CK1 |
CK6 |
CK5 |
CK4 |
0.1 |
359.9 |
CK5 |
CK4 |
CK3 |
OK2 |
179.8 |
179.9 |
CK3 |
CK4 |
CK5 |
OK1 |
180.2 |
180.4 |
CK5 |
CK4 |
OK1 |
H0K1 |
0.2 |
90.1 |
CK6 |
CK5 |
CK4 |
HCK5 |
180.0 |
180.1 |
CK4 |
CK5 |
CK6 |
HCK6 |
180.1 |
179.9 |
OK1 |
CK4 |
CK3 |
OK2 |
0.0 |
0.3 |
CK3 |
CK4 |
OK1 |
CK5 |
179.8 |
179.6 |
OK1 |
CK4 |
CK5 |
CK6 |
179.9 |
180.0 |
OK1 |
CK4 |
CK5 |
HCK5 |
359.9 |
359.9 |
CK5 |
CK6 |
CK1 |
HCK1 |
179.9 |
180.0 |
CK1 |
CK6 |
CK5 |
HCK6 |
180.0 |
180.0 |
CK6 |
CK5 |
CK4 |
OK1 |
179.9 |
180.0 |
CK4 |
CK5 |
CK6 |
HCK5 |
180.0 |
179.9 |
HCK5 |
CK5 |
CK4 |
OK1 |
359.9 |
359.9 |
CK4 |
CK5 |
HCK5 |
CK6 |
180.0 |
180.1 |
HCK5 |
CK5 |
CK6 |
HCK6 |
0.1 |
360.0 |
HCK6 |
CK6 |
CK1 |
HCK1 |
359.9 |
360.0 |
CK1 |
CK6 |
HCK6 |
CK5 |
180.0 |
180.0 |
HCK6 |
CK6 |
CK5 |
HCK5 |
0.1 |
360.0 |
CK2 |
CK7 |
CK8 |
CKC |
179.5 |
179.7 |
CK8 |
CK7 |
CKC |
CKB |
359.9 |
359.4 |
CK8 |
CK7 |
CKC |
HC12 |
179.9 |
180.1 |
CK9 |
CK8 |
CK7 |
HCK8 |
180.0 |
180.1 |
CK7 |
CK8 |
CK9 |
CKA |
359.9 |
0.0 |
CK7 |
CK8 |
CK9 |
HCK9 |
179.9 |
179.9 |
CK2 |
CK7 |
CKC |
CK8 |
180.5 |
180.3 |
CKC |
CK7 |
CK8 |
CK9 |
0.1 |
0.3 |
CKC |
CK7 |
CK8 |
HCK8 |
180.1 |
180.2 |
CKA |
CKB |
CKC |
CK7 |
0.0 |
0.5 |
CK7 |
CKC |
CKB |
HC11 |
180.0 |
180.3 |
CKB |
CKC |
CK7 |
HC12 |
180.0 |
179.4 |
CK9 |
CK8 |
CK7 |
CKC |
0.1 |
0.3 |
CK7 |
CK8 |
CK9 |
HCK8 |
180.0 |
179.9 |
CKA |
CK9 |
CK8 |
HCK9 |
180.0 |
180.1 |
CK8 |
CK9 |
CKA |
CKB |
0.0 |
360.0 |
CK8 |
CK9 |
CKA |
HC10 |
180.1 |
180.0 |
HCK8 |
CK8 |
CK7 |
CKC |
180.1 |
180.2 |
CK7 |
CK8 |
HCK8 |
CK9 |
180.0 |
180.1 |
HCK8 |
CK8 |
CK9 |
CKA |
179.9 |
180.1 |
HCK8 |
CK8 |
CK9 |
HCK9 |
359.9 |
0.0 |
CKA |
CK9 |
CK8 |
HCK8 |
179.9 |
180.1 |
CK8 |
CK9 |
CKA |
HCK9 |
180.0 |
179.9 |
CKB |
CKA |
CK9 |
HC10 |
180.0 |
180.0 |
CK9 |
CKA |
CKB |
CKC |
0.0 |
359.8 |
CK9 |
CKA |
CKB |
HC11 |
180.0 |
180.0 |
HCK9 |
CK9 |
CK8 |
HCK8 |
359.9 |
0.0 |
CK8 |
CK9 |
HCK9 |
CKA |
180.0 |
180.1 |
HCK9 |
CK9 |
CKA |
CKB |
180.0 |
180.1 |
HCK9 |
CK9 |
CKA |
HC10 |
0.1 |
0.1 |
CK7 |
CKC |
CKB |
CKA |
0.0 |
0.5 |
CKB |
CKA |
CK9 |
HCK9 |
180.0 |
180.1 |
CK9 |
CKA |
CKB |
HC10 |
180.0 |
180.0 |
CKC |
CKB |
CKA |
HC11 |
180.0 |
179.8 |
CKA |
CKB |
CKC |
HC12 |
180.0 |
179.9 |
HC10 |
CKA |
CK9 |
HCK9 |
0.1 |
0.1 |
CK9 |
CKA |
HC10 |
CKB |
180.0 |
180.0 |
HC10 |
CKA |
CKB |
CKC |
180.0 |
179.7 |
HC10 |
CKA |
CKB |
HC11 |
360.0 |
359.9 |
CK7 |
CKC |
CKB |
HC12 |
180.0 |
180.6 |
CKC |
CKB |
CKA |
HC10 |
180.0 |
179.7 |
CKA |
CKB |
CKC |
HC11 |
180.0 |
180.2 |
HC11 |
CKB |
CKA |
HC10 |
360.0 |
359.9 |
CKA |
CKB |
HC11 |
CKC |
180.0 |
179.8 |
HC11 |
CKB |
CKC |
HC12 |
0.0 |
359.7 |
CK7 |
CKC |
HC12 |
CKB |
180.0 |
179.4 |
HC12 |
CKC |
CKB |
HC11 |
0.0 |
359.7 |