PDB Chemical Component BOZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BOZ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.441 1.389
C1 C6 1.426 1.378
C1 C7 1.421 1.507
C2 C3 1.423 1.364
C2 H2 1.080 1.080
C3 C4 1.416 1.402
C3 H3 1.080 1.081
C4 C5 1.377 1.410
C4 N3 1.339 1.344
C5 C6 1.404 1.390
C5 N4 1.335 1.376
C6 H6 1.080 1.080
C7 N1 1.334 1.469
C7 N2 1.331 1.469
C7 H7 1.100 1.089
N1 HN11 1.000 1.009
N1 HN12 1.000 1.008
N2 HN21 1.001 1.009
N2 HN22 1.000 1.009
N3 C8 1.323 1.311
N4 C8 1.348 1.371
N4 HN4 1.000 0.969
C8 C9 1.432 1.477
C1' C2' 1.424 1.389
C1' C6' 1.427 1.378
C1' C7' 1.427 1.507
C2' C3' 1.418 1.364
C2' H2' 1.080 1.080
C3' C4' 1.386 1.402
C3' H3' 1.080 1.079
C4' C5' 1.358 1.410
C4' N3' 1.341 1.344
C5' C6' 1.405 1.389
C5' N4' 1.336 1.376
C6' H6' 1.080 1.081
C7' N1' 1.343 1.469
C7' N2' 1.340 1.470
C7' H7' 1.100 1.090
N1' H1'1 1.000 1.009
N1' H1'2 1.000 1.009
N2' H2'1 1.000 1.008
N2' H2'2 1.000 1.008
N3' C8' 1.323 1.310
N3' ZN 1.912 1.790
N4' C8' 1.334 1.370
N4' HN4' 0.999 0.971
C8' C9 1.435 1.477
C9 O9 1.246 1.216
ZN N3 2.024 5.530

Bond Angles for BOZ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 116.6 120.6
C2 C1 C7 122.0 119.7
C1 C2 C3 123.5 120.8
C1 C2 H2 118.2 119.6
C6 C1 C7 121.3 119.7
C1 C6 C5 120.2 119.7
C1 C6 H6 119.9 120.2
C1 C7 N1 121.6 109.5
C1 C7 N2 121.4 109.5
C1 C7 H7 90.4 109.5
C3 C2 H2 118.3 119.6
C2 C3 C4 116.0 119.9
C2 C3 H3 122.0 120.1
C4 C3 H3 122.0 120.0
C3 C4 C5 122.3 119.3
C3 C4 N3 127.7 133.4
C5 C4 N3 110.0 107.3
C4 C5 C6 121.4 119.8
C4 C5 N4 109.3 106.2
C4 N3 C8 102.0 109.8
C6 C5 N4 129.3 134.0
C5 C6 H6 119.9 120.1
C5 N4 C8 102.0 107.0
C5 N4 HN4 129.0 126.5
N1 C7 N2 117.1 109.5
N1 C7 H7 90.5 109.4
C7 N1 HN11 109.5 106.7
C7 N1 HN12 109.4 106.7
N2 C7 H7 90.4 109.5
C7 N2 HN21 109.5 106.7
C7 N2 HN22 109.5 106.7
HN11 N1 HN12 109.4 106.7
HN21 N2 HN22 109.5 106.7
N3 C8 N4 116.7 109.7
N3 C8 C9 122.3 125.1
C8 N4 HN4 129.0 126.5
N4 C8 C9 121.0 125.2
C8 C9 C8' 126.1 120.0
C8 C9 O9 115.9 119.9
C2' C1' C6' 115.9 120.5
C2' C1' C7' 121.0 119.7
C1' C2' C3' 122.2 120.8
C1' C2' H2' 118.9 119.6
C6' C1' C7' 123.0 119.7
C1' C6' C5' 121.1 119.7
C1' C6' H6' 119.4 120.1
C1' C7' N1' 122.8 109.5
C1' C7' N2' 122.9 109.5
C1' C7' H7' 90.1 109.5
C3' C2' H2' 118.9 119.6
C2' C3' C4' 118.2 119.8
C2' C3' H3' 120.9 120.1
C4' C3' H3' 120.9 120.1
C3' C4' C5' 122.0 119.4
C3' C4' N3' 127.5 133.4
C5' C4' N3' 110.5 107.2
C4' C5' C6' 120.5 119.8
C4' C5' N4' 107.8 106.2
C4' N3' C8' 102.9 109.8
C4' N3' ZN 130.1 125.1
C6' C5' N4' 131.7 134.1
C5' C6' H6' 119.4 120.1
C5' N4' C8' 104.4 107.1
C5' N4' HN4' 127.8 126.4
N1' C7' N2' 114.3 109.5
N1' C7' H7' 90.0 109.5
C7' N1' H1'1 109.5 106.7
C7' N1' H1'2 109.5 106.7
N2' C7' H7' 90.0 109.4
C7' N2' H2'1 109.5 106.7
C7' N2' H2'2 109.5 106.7
H1'1 N1' H1'2 109.5 106.7
H2'1 N2' H2'2 109.5 106.8
C8' N3' ZN 126.2 125.1
N3' C8' N4' 114.5 109.7
N3' C8' C9 123.5 125.1
C8' N4' HN4' 127.8 126.5
N4' C8' C9 122.0 125.1
C8' C9 O9 117.6 120.0

Torsion Angles for BOZ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 184.4 180.4
C2 C1 C6 C5 0.2 359.4
C2 C1 C6 H6 180.2 179.7
C2 C1 C7 N1 161.9 150.0
C2 C1 C7 N2 340.4 30.1
C2 C1 C7 H7 71.1 270.0
C3 C2 C1 H2 180.0 180.1
C1 C2 C3 C4 359.4 359.9
C1 C2 C3 H3 179.4 180.0
C2 C1 C6 C7 175.6 179.6
C6 C1 C2 C3 0.3 0.3
C6 C1 C2 H2 180.3 180.3
C6 C1 C7 N1 337.3 329.7
C6 C1 C7 N2 155.7 209.7
C6 C1 C7 H7 246.5 89.7
C4 C5 C6 C1 359.6 0.6
C1 C6 C5 N4 180.6 180.2
C5 C6 C1 H6 180.0 179.7
C2 C1 C7 C6 184.6 180.3
C7 C1 C2 C3 175.9 180.0
C7 C1 C2 H2 355.9 359.9
C7 C1 C6 C5 184.5 179.7
C7 C1 C6 H6 4.6 0.0
N1 C7 C1 N2 181.5 120.0
N1 C7 C1 H7 90.8 240.0
C1 C7 N1 HN11 180.0 300.0
C1 C7 N1 HN12 300.0 53.8
N2 C7 C1 H7 269.3 120.1
C1 C7 N2 HN21 180.0 66.2
C1 C7 N2 HN22 300.0 180.0
C3 C2 C1 C6 0.3 0.3
C3 C2 C1 C7 175.9 180.0
C1 C2 C3 H2 180.0 179.9
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C5 0.3 0.1
C2 C3 C4 N3 180.0 180.0
H2 C2 C1 C6 180.3 180.3
H2 C2 C1 C7 355.9 359.9
C1 C2 H2 C3 180.0 180.1
H2 C2 C3 C4 179.4 180.0
H2 C2 C3 H3 359.4 0.0
C4 C3 C2 H2 179.4 180.0
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 N3 180.3 180.1
C3 C4 C5 C6 0.1 359.7
C3 C4 C5 N4 179.3 180.0
C3 C4 N3 C8 180.4 180.0
H3 C3 C2 H2 359.4 0.0
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 180.3 180.0
H3 C3 C4 N3 0.0 359.9
C1 C6 C5 C4 359.6 0.6
C5 C4 C3 H3 180.3 180.0
C3 C4 C5 N3 179.8 179.9
C5 C4 N3 C8 0.1 359.9
C6 C5 C4 N4 180.8 179.7
C4 C5 C6 H6 179.6 180.3
C4 C5 N4 C8 0.5 360.0
C4 C5 N4 HN4 180.5 180.0
N3 C4 C3 H3 0.0 359.9
C3 C4 N3 C5 180.3 180.1
N3 C4 C5 C6 180.4 179.7
N3 C4 C5 N4 359.6 0.1
C4 N3 C8 N4 0.2 0.1
C4 N3 C8 C9 179.3 180.0
C5 C6 C1 C7 184.5 179.7
C1 C6 C5 H6 180.0 180.3
C6 C5 C4 N3 180.4 179.7
C4 C5 C6 N4 179.0 180.4
C6 C5 N4 C8 179.6 180.4
C6 C5 N4 HN4 359.6 0.3
N4 C5 C4 N3 359.6 0.1
C4 C5 N4 C6 180.9 179.6
N4 C5 C6 H6 0.6 359.9
N3 C8 N4 C5 359.5 360.0
C8 N4 C5 HN4 180.0 180.0
C5 N4 C8 C9 180.4 180.1
H6 C6 C1 C7 4.6 0.0
C1 C6 H6 C5 180.0 179.7
H6 C6 C5 N4 0.6 359.9
C1 C7 N1 N2 178.6 240.0
C1 C7 N1 H7 269.3 120.0
N2 C7 N1 H7 90.7 240.0
N1 C7 N2 HN21 358.6 306.2
N1 C7 N2 HN22 118.6 60.0
HN11 N1 C7 HN12 240.0 246.2
C1 C7 N2 N1 181.4 120.0
C1 C7 N2 H7 90.7 239.9
N1 C7 N2 H7 269.3 120.0
N2 C7 N1 HN11 1.5 60.0
N2 C7 N1 HN12 121.4 173.8
HN21 N2 C7 HN22 240.0 246.2
C1 C7 H7 N1 121.6 240.0
C1 C7 H7 N2 238.6 120.0
N1 C7 H7 N2 117.1 240.0
H7 C7 N1 HN11 270.7 180.0
H7 C7 N1 HN12 30.7 293.8
H7 C7 N2 HN21 89.3 186.2
H7 C7 N2 HN22 209.3 300.0
HN11 N1 C7 N2 1.5 60.0
HN11 N1 C7 H7 270.7 180.0
C7 N1 HN11 HN12 120.0 113.8
HN12 N1 C7 N2 121.4 173.8
HN12 N1 C7 H7 30.7 293.8
C7 N1 HN12 HN11 240.0 246.2
HN21 N2 C7 H7 89.3 186.2
C7 N2 HN21 HN22 120.0 113.8
HN22 N2 C7 H7 209.3 300.0
C7 N2 HN22 HN21 240.0 246.2
C5 N4 C8 N3 359.5 360.0
N3 C8 N4 HN4 179.5 180.0
N4 C8 N3 C9 180.9 180.1
N3 C8 C9 C8' 343.4 355.0
N3 C8 C9 O9 171.1 175.0
C5 N4 C8 HN4 180.0 180.0
N3 C8 N4 C9 179.1 179.9
N4 C8 C9 C8' 162.5 174.9
N4 C8 C9 O9 350.2 354.9
C5 N4 HN4 C8 180.0 180.0
HN4 N4 C8 C9 0.4 0.1
N3 C8 C9 N4 180.9 180.1
C9 C8 N4 HN4 0.4 0.1
N3' C8' C9 C8 12.5 185.2
N4' C8' C9 C8 191.8 5.5
C8' C9 C8 O9 172.3 180.0
C6' C1' C2' C7' 183.7 180.0
C2' C1' C6' C5' 0.6 0.0
C2' C1' C6' H6' 180.6 180.0
C2' C1' C7' N1' 209.8 30.0
C2' C1' C7' N2' 29.6 150.0
C2' C1' C7' H7' 119.7 269.9
C3' C2' C1' H2' 180.0 180.1
C1' C2' C3' C4' 359.5 359.9
C1' C2' C3' H3' 179.5 180.0
C2' C1' C6' C7' 176.2 180.0
C6' C1' C2' C3' 0.0 0.0
C6' C1' C2' H2' 180.1 179.9
C6' C1' C7' N1' 25.8 210.0
C6' C1' C7' N2' 205.6 330.0
C6' C1' C7' H7' 295.7 90.0
C4' C5' C6' C1' 359.2 359.9
C1' C6' C5' N4' 179.7 180.0
C5' C6' C1' H6' 180.0 180.0
C2' C1' C7' C6' 184.0 180.0
C7' C1' C2' C3' 176.3 180.1
C7' C1' C2' H2' 356.3 360.0
C7' C1' C6' C5' 184.4 180.0
C7' C1' C6' H6' 4.4 0.0
N1' C7' C1' N2' 180.2 240.0
N1' C7' C1' H7' 90.1 120.1
C1' C7' N1' H1'1 180.0 60.0
C1' C7' N1' H1'2 300.0 173.8
N2' C7' C1' H7' 269.9 240.1
C1' C7' N2' H2'1 180.0 66.2
C1' C7' N2' H2'2 300.0 180.0
C3' C2' C1' C6' 0.0 0.0
C3' C2' C1' C7' 176.3 180.1
C1' C2' C3' H2' 180.0 179.9
C4' C3' C2' H3' 180.0 179.9
C2' C3' C4' C5' 0.3 0.0
C2' C3' C4' N3' 179.9 180.4
H2' C2' C1' C6' 180.1 179.9
H2' C2' C1' C7' 356.3 360.0
C1' C2' H2' C3' 180.0 180.1
H2' C2' C3' C4' 179.5 180.0
H2' C2' C3' H3' 359.5 0.1
C4' C3' C2' H2' 179.5 180.0
C2' C3' C4' H3' 180.0 180.1
C5' C4' C3' N3' 180.4 179.6
C3' C4' C5' C6' 0.4 0.0
C3' C4' C5' N4' 179.9 180.0
C3' C4' N3' C8' 180.6 180.1
C3' C4' N3' ZN 350.3 359.9
H3' C3' C2' H2' 359.5 0.1
C2' C3' H3' C4' 180.0 179.9
H3' C3' C4' C5' 180.3 180.0
H3' C3' C4' N3' 359.9 0.3
C1' C6' C5' C4' 359.2 359.9
C5' C4' C3' H3' 180.3 180.0
C3' C4' C5' N3' 179.6 180.3
C5' C4' N3' C8' 0.2 0.4
C5' C4' N3' ZN 169.9 180.3
C6' C5' C4' N4' 180.4 180.0
C4' C5' C6' H6' 179.2 179.9
C4' C5' N4' C8' 359.4 0.0
C4' C5' N4' HN4' 179.3 180.0
N3' C4' C3' H3' 359.9 0.3
C3' C4' N3' C5' 180.4 179.7
N3' C4' C5' C6' 180.7 179.8
N3' C4' C5' N4' 0.3 359.7
C8' N3' C4' ZN 190.3 180.2
C4' N3' C8' N4' 359.3 359.6
C4' N3' C8' C9 178.6 179.8
C5' C6' C1' C7' 184.4 180.0
C1' C6' C5' H6' 180.0 180.0
C6' C5' C4' N3' 180.7 179.8
C4' C5' C6' N4' 179.5 179.9
C6' C5' N4' C8' 178.9 180.0
C6' C5' N4' HN4' 358.8 360.0
N4' C5' C4' N3' 0.3 359.7
C4' C5' N4' C6' 180.5 180.1
N4' C5' C6' H6' 359.7 360.0
N3' C8' N4' C5' 0.8 0.2
C8' N4' C5' HN4' 180.0 180.0
C5' N4' C8' C9 181.5 180.0
H6' C6' C1' C7' 4.4 0.0
C1' C6' H6' C5' 180.0 180.0
H6' C6' C5' N4' 359.7 360.0
C1' C7' N1' N2' 179.8 120.0
C1' C7' N1' H7' 269.9 239.9
N2' C7' N1' H7' 90.1 119.9
N1' C7' N2' H2'1 359.8 186.1
N1' C7' N2' H2'2 119.8 300.0
H1'1 N1' C7' H1'2 240.0 246.2
C1' C7' N2' N1' 180.2 240.0
C1' C7' N2' H7' 90.1 120.0
N1' C7' N2' H7' 269.9 240.0
N2' C7' N1' H1'1 0.2 300.0
N2' C7' N1' H1'2 120.2 53.8
H2'1 N2' C7' H2'2 240.0 246.1
C1' C7' H7' N1' 122.8 120.0
C1' C7' H7' N2' 237.1 240.0
N1' C7' H7' N2' 114.3 120.0
H7' C7' N1' H1'1 270.1 180.1
H7' C7' N1' H1'2 30.1 293.9
H7' C7' N2' H2'1 89.9 306.2
H7' C7' N2' H2'2 209.9 60.0
H1'1 N1' C7' N2' 0.2 300.0
H1'1 N1' C7' H7' 270.1 180.1
C7' N1' H1'1 H1'2 120.0 113.8
H1'2 N1' C7' N2' 120.2 53.8
H1'2 N1' C7' H7' 30.1 293.9
C7' N1' H1'2 H1'1 240.0 246.2
H2'1 N2' C7' H7' 89.9 306.2
C7' N2' H2'1 H2'2 120.0 113.8
H2'2 N2' C7' H7' 209.9 60.0
C7' N2' H2'2 H2'1 240.0 246.2
C8 C9 C8' N3' 12.5 185.2
C4' N3' C8' ZN 170.3 179.8
C5' N4' C8' N3' 0.8 0.2
N3' C8' N4' HN4' 180.9 180.3
N4' C8' N3' C9 180.7 179.7
N3' C8' C9 O9 184.7 5.2
C4' N3' ZN C8' 192.4 180.2
ZN N3' C8' N4' 189.1 179.7
ZN N3' C8' C9 8.4 360.0
C8 C9 C8' N4' 191.8 5.5
C5' N4' C8' HN4' 180.0 180.0
N4' C8' N3' ZN 189.1 179.7
N3' C8' N4' C9 179.3 180.3
N4' C8' C9 O9 3.9 185.5
C5' N4' HN4' C8' 180.0 180.0
HN4' N4' C8' C9 1.5 0.0
C8 C9 C8' O9 187.9 180.0
C9 C8' N3' ZN 8.4 360.0
N3' C8' C9 N4' 180.7 179.7
C9 C8' N4' HN4' 1.5 0.0
C8 C9 O9 C8' 172.9 180.0