PDB Chemical Component BOS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BOS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
S1 |
1.643 |
1.656 |
N1 |
HN11 |
1.000 |
0.969 |
N1 |
HN12 |
1.000 |
0.970 |
S1 |
O1 |
1.436 |
1.421 |
S1 |
O2 |
1.421 |
1.421 |
S1 |
C1 |
1.749 |
1.762 |
C1 |
C2 |
1.408 |
1.382 |
C1 |
C6 |
1.411 |
1.383 |
C2 |
C3 |
1.407 |
1.381 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
C4 |
1.428 |
1.389 |
C3 |
H3 |
1.080 |
1.081 |
C4 |
C5 |
1.421 |
1.389 |
C4 |
N2 |
1.424 |
1.398 |
C5 |
C6 |
1.407 |
1.381 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.080 |
N2 |
C7 |
1.374 |
1.348 |
N2 |
HN2 |
1.001 |
0.970 |
C7 |
O3 |
1.220 |
1.216 |
C7 |
C8 |
1.508 |
1.473 |
C8 |
C9 |
1.418 |
1.398 |
C8 |
C13 |
1.447 |
1.405 |
C9 |
C10 |
1.404 |
1.376 |
C9 |
H9 |
1.080 |
1.080 |
C10 |
C11 |
1.417 |
1.388 |
C10 |
H10 |
1.080 |
1.080 |
C11 |
C12 |
1.409 |
1.379 |
C11 |
H11 |
1.080 |
1.079 |
C12 |
C13 |
1.424 |
1.390 |
C12 |
H12 |
1.080 |
1.080 |
C13 |
S2 |
1.803 |
1.763 |
S2 |
HS2 |
1.300 |
1.345 |
Bond Angles for BOS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
S1 |
N1 |
HN11 |
109.5 |
120.0 |
S1 |
N1 |
HN12 |
109.5 |
119.9 |
N1 |
S1 |
O1 |
105.1 |
105.7 |
N1 |
S1 |
O2 |
107.3 |
105.8 |
N1 |
S1 |
C1 |
107.0 |
107.4 |
HN11 |
N1 |
HN12 |
109.4 |
120.1 |
O1 |
S1 |
O2 |
118.3 |
125.4 |
O1 |
S1 |
C1 |
108.5 |
105.8 |
O2 |
S1 |
C1 |
110.0 |
105.8 |
S1 |
C1 |
C2 |
119.7 |
119.9 |
S1 |
C1 |
C6 |
120.0 |
119.9 |
C2 |
C1 |
C6 |
120.3 |
120.2 |
C1 |
C2 |
C3 |
119.9 |
120.0 |
C1 |
C2 |
H2 |
120.1 |
120.0 |
C1 |
C6 |
C5 |
120.1 |
120.1 |
C1 |
C6 |
H6 |
119.9 |
120.0 |
C3 |
C2 |
H2 |
120.0 |
120.0 |
C2 |
C3 |
C4 |
120.5 |
120.0 |
C2 |
C3 |
H3 |
119.8 |
120.0 |
C4 |
C3 |
H3 |
119.7 |
120.0 |
C3 |
C4 |
C5 |
118.8 |
119.8 |
C3 |
C4 |
N2 |
122.3 |
120.1 |
C5 |
C4 |
N2 |
118.9 |
120.1 |
C4 |
C5 |
C6 |
120.4 |
119.9 |
C4 |
C5 |
H5 |
119.8 |
120.0 |
C4 |
N2 |
C7 |
131.2 |
120.0 |
C4 |
N2 |
HN2 |
114.4 |
120.0 |
C6 |
C5 |
H5 |
119.8 |
120.0 |
C5 |
C6 |
H6 |
120.0 |
119.9 |
C7 |
N2 |
HN2 |
114.4 |
120.0 |
N2 |
C7 |
O3 |
125.7 |
120.0 |
N2 |
C7 |
C8 |
113.0 |
120.0 |
O3 |
C7 |
C8 |
121.4 |
120.0 |
C7 |
C8 |
C9 |
117.7 |
120.3 |
C7 |
C8 |
C13 |
123.5 |
120.2 |
C9 |
C8 |
C13 |
118.8 |
119.5 |
C8 |
C9 |
C10 |
121.1 |
120.0 |
C8 |
C9 |
H9 |
119.4 |
120.0 |
C8 |
C13 |
C12 |
119.1 |
119.7 |
C8 |
C13 |
S2 |
120.7 |
120.1 |
C10 |
C9 |
H9 |
119.5 |
120.1 |
C9 |
C10 |
C11 |
120.5 |
120.4 |
C9 |
C10 |
H10 |
119.8 |
119.8 |
C11 |
C10 |
H10 |
119.7 |
119.8 |
C10 |
C11 |
C12 |
119.5 |
120.4 |
C10 |
C11 |
H11 |
120.3 |
119.8 |
C12 |
C11 |
H11 |
120.2 |
119.8 |
C11 |
C12 |
C13 |
121.0 |
120.1 |
C11 |
C12 |
H12 |
119.5 |
119.9 |
C13 |
C12 |
H12 |
119.5 |
120.0 |
C12 |
C13 |
S2 |
120.1 |
120.2 |
C13 |
S2 |
HS2 |
109.5 |
100.0 |
Torsion Angles for BOS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
HN11 |
N1 |
S1 |
HN12 |
120.0 |
180.2 |
O1 |
S1 |
N1 |
O2 |
126.7 |
134.8 |
O1 |
S1 |
N1 |
C1 |
244.8 |
247.4 |
O2 |
S1 |
N1 |
C1 |
118.1 |
112.6 |
N1 |
S1 |
C1 |
C2 |
316.3 |
90.0 |
N1 |
S1 |
C1 |
C6 |
136.7 |
269.7 |
S1 |
N1 |
HN11 |
HN12 |
240.0 |
179.8 |
HN11 |
N1 |
S1 |
O1 |
331.8 |
247.4 |
HN11 |
N1 |
S1 |
O2 |
205.1 |
112.6 |
HN11 |
N1 |
S1 |
C1 |
87.0 |
360.0 |
S1 |
N1 |
HN12 |
HN11 |
120.0 |
180.2 |
HN12 |
N1 |
S1 |
O1 |
211.8 |
67.2 |
HN12 |
N1 |
S1 |
O2 |
85.1 |
292.4 |
HN12 |
N1 |
S1 |
C1 |
327.0 |
179.8 |
O1 |
S1 |
N1 |
HN11 |
331.8 |
247.4 |
O1 |
S1 |
N1 |
HN12 |
211.8 |
67.2 |
N1 |
S1 |
O1 |
O2 |
240.3 |
236.8 |
N1 |
S1 |
O1 |
C1 |
114.2 |
113.7 |
O2 |
S1 |
O1 |
C1 |
233.9 |
236.9 |
O1 |
S1 |
C1 |
C2 |
69.2 |
202.6 |
O1 |
S1 |
C1 |
C6 |
249.7 |
22.3 |
O2 |
S1 |
N1 |
HN11 |
205.1 |
112.6 |
O2 |
S1 |
N1 |
HN12 |
85.1 |
292.4 |
N1 |
S1 |
O2 |
O1 |
118.5 |
123.1 |
N1 |
S1 |
O2 |
C1 |
243.9 |
246.2 |
O1 |
S1 |
O2 |
C1 |
125.4 |
123.1 |
O2 |
S1 |
C1 |
C2 |
200.0 |
337.4 |
O2 |
S1 |
C1 |
C6 |
20.4 |
157.1 |
C1 |
S1 |
N1 |
HN11 |
87.0 |
360.0 |
C1 |
S1 |
N1 |
HN12 |
327.0 |
179.8 |
N1 |
S1 |
C1 |
O1 |
247.1 |
247.4 |
N1 |
S1 |
C1 |
O2 |
116.3 |
112.6 |
O1 |
S1 |
C1 |
O2 |
229.2 |
225.2 |
C2 |
C1 |
S1 |
C6 |
179.5 |
180.3 |
S1 |
C1 |
C2 |
C3 |
180.5 |
180.0 |
S1 |
C1 |
C2 |
H2 |
0.5 |
360.0 |
S1 |
C1 |
C6 |
C5 |
179.4 |
179.7 |
S1 |
C1 |
C6 |
H6 |
359.5 |
0.3 |
S1 |
C1 |
C2 |
C6 |
180.5 |
179.7 |
C2 |
C1 |
C6 |
C5 |
359.9 |
359.5 |
C2 |
C1 |
C6 |
H6 |
179.9 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.1 |
C1 |
C2 |
C3 |
C4 |
0.0 |
360.0 |
C1 |
C2 |
C3 |
H3 |
180.0 |
180.0 |
S1 |
C1 |
C6 |
C2 |
179.5 |
180.3 |
C6 |
C1 |
C2 |
C3 |
0.1 |
0.3 |
C6 |
C1 |
C2 |
H2 |
180.1 |
180.2 |
C4 |
C5 |
C6 |
C1 |
0.0 |
0.5 |
C1 |
C6 |
C5 |
H5 |
180.0 |
180.3 |
C5 |
C6 |
C1 |
H6 |
180.0 |
179.4 |
C3 |
C2 |
C1 |
C6 |
0.1 |
0.3 |
C1 |
C2 |
C3 |
H2 |
180.0 |
179.9 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C5 |
359.9 |
0.0 |
C2 |
C3 |
C4 |
N2 |
179.6 |
180.0 |
H2 |
C2 |
C1 |
C6 |
180.1 |
180.2 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.1 |
H2 |
C2 |
C3 |
C4 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
H3 |
0.0 |
0.0 |
C4 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
N2 |
180.3 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.1 |
359.7 |
C3 |
C4 |
C5 |
H5 |
180.1 |
179.9 |
C3 |
C4 |
N2 |
C7 |
357.0 |
213.4 |
C3 |
C4 |
N2 |
HN2 |
177.0 |
33.4 |
H3 |
C3 |
C2 |
H2 |
0.0 |
0.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
C5 |
179.9 |
180.0 |
H3 |
C3 |
C4 |
N2 |
359.6 |
0.0 |
C1 |
C6 |
C5 |
C4 |
0.0 |
0.5 |
C5 |
C4 |
C3 |
H3 |
179.9 |
180.0 |
C3 |
C4 |
C5 |
N2 |
179.7 |
180.0 |
C5 |
C4 |
N2 |
C7 |
176.7 |
33.4 |
C5 |
C4 |
N2 |
HN2 |
356.7 |
213.4 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
H6 |
180.0 |
180.0 |
N2 |
C4 |
C3 |
H3 |
359.6 |
0.0 |
C3 |
C4 |
N2 |
C5 |
180.3 |
180.0 |
N2 |
C4 |
C5 |
C6 |
180.4 |
179.7 |
N2 |
C4 |
C5 |
H5 |
0.4 |
359.9 |
C7 |
N2 |
C4 |
HN2 |
180.0 |
180.1 |
C4 |
N2 |
C7 |
O3 |
0.1 |
5.4 |
C4 |
N2 |
C7 |
C8 |
180.3 |
185.5 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.6 |
C6 |
C5 |
C4 |
N2 |
180.4 |
179.7 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.2 |
H5 |
C5 |
C4 |
N2 |
0.4 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.8 |
H5 |
C5 |
C6 |
H6 |
360.0 |
359.8 |
C1 |
C6 |
H6 |
C5 |
180.0 |
179.4 |
H6 |
C6 |
C5 |
H5 |
360.0 |
359.8 |
C4 |
N2 |
C7 |
HN2 |
180.0 |
179.9 |
O3 |
C7 |
N2 |
C8 |
179.8 |
179.9 |
N2 |
C7 |
C8 |
C9 |
110.6 |
359.9 |
N2 |
C7 |
C8 |
C13 |
290.7 |
179.7 |
C4 |
N2 |
HN2 |
C7 |
180.0 |
180.1 |
HN2 |
N2 |
C7 |
O3 |
180.1 |
185.5 |
HN2 |
N2 |
C7 |
C8 |
0.3 |
5.6 |
O3 |
C7 |
N2 |
HN2 |
180.1 |
185.5 |
N2 |
C7 |
O3 |
C8 |
180.2 |
180.1 |
O3 |
C7 |
C8 |
C9 |
290.8 |
180.0 |
O3 |
C7 |
C8 |
C13 |
110.8 |
359.8 |
C8 |
C7 |
N2 |
HN2 |
0.3 |
5.6 |
N2 |
C7 |
C8 |
O3 |
179.8 |
179.9 |
C9 |
C8 |
C7 |
C13 |
180.0 |
180.2 |
C7 |
C8 |
C9 |
C10 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H9 |
0.1 |
0.1 |
C7 |
C8 |
C13 |
C12 |
180.0 |
179.7 |
C7 |
C8 |
C13 |
S2 |
0.0 |
0.3 |
C7 |
C8 |
C9 |
C13 |
180.0 |
179.8 |
C9 |
C8 |
C13 |
C12 |
0.1 |
359.5 |
C9 |
C8 |
C13 |
S2 |
180.0 |
180.1 |
C10 |
C9 |
C8 |
H9 |
180.0 |
179.9 |
C8 |
C9 |
C10 |
C11 |
359.9 |
0.1 |
C8 |
C9 |
C10 |
H10 |
179.9 |
180.0 |
C7 |
C8 |
C13 |
C9 |
180.0 |
180.2 |
C13 |
C8 |
C9 |
C10 |
0.0 |
0.2 |
C13 |
C8 |
C9 |
H9 |
180.0 |
180.3 |
C11 |
C12 |
C13 |
C8 |
359.9 |
0.6 |
C8 |
C13 |
C12 |
H12 |
179.9 |
180.4 |
C12 |
C13 |
C8 |
S2 |
180.0 |
179.4 |
C8 |
C13 |
S2 |
HS2 |
191.3 |
269.4 |
C10 |
C9 |
C8 |
C13 |
0.0 |
0.2 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.1 |
C11 |
C10 |
C9 |
H10 |
180.0 |
180.1 |
C9 |
C10 |
C11 |
C12 |
0.0 |
359.9 |
C9 |
C10 |
C11 |
H11 |
180.0 |
180.0 |
H9 |
C9 |
C8 |
C13 |
180.0 |
180.3 |
C8 |
C9 |
H9 |
C10 |
180.0 |
179.9 |
H9 |
C9 |
C10 |
C11 |
179.9 |
180.0 |
H9 |
C9 |
C10 |
H10 |
359.9 |
359.9 |
C11 |
C10 |
C9 |
H9 |
179.9 |
180.0 |
C9 |
C10 |
C11 |
H10 |
180.0 |
179.9 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
C13 |
0.0 |
359.7 |
C10 |
C11 |
C12 |
H12 |
180.1 |
179.9 |
H10 |
C10 |
C9 |
H9 |
359.9 |
359.9 |
C9 |
C10 |
H10 |
C11 |
180.0 |
180.1 |
H10 |
C10 |
C11 |
C12 |
180.0 |
180.0 |
H10 |
C10 |
C11 |
H11 |
0.0 |
0.0 |
C8 |
C13 |
C12 |
C11 |
359.9 |
0.6 |
C12 |
C11 |
C10 |
H10 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H12 |
180.0 |
179.8 |
C11 |
C12 |
C13 |
S2 |
179.9 |
180.0 |
H11 |
C11 |
C10 |
H10 |
0.0 |
0.0 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
H11 |
C11 |
C12 |
C13 |
180.0 |
179.7 |
H11 |
C11 |
C12 |
H12 |
0.1 |
359.9 |
C8 |
C13 |
C12 |
S2 |
180.0 |
180.6 |
C13 |
C12 |
C11 |
H11 |
180.0 |
179.7 |
C11 |
C12 |
C13 |
H12 |
180.0 |
180.2 |
C12 |
C13 |
S2 |
HS2 |
11.2 |
90.0 |
H12 |
C12 |
C11 |
H11 |
0.1 |
359.9 |
C11 |
C12 |
H12 |
C13 |
180.0 |
179.8 |
H12 |
C12 |
C13 |
S2 |
359.9 |
359.8 |
C8 |
C13 |
S2 |
C12 |
180.0 |
179.4 |
S2 |
C13 |
C12 |
H12 |
359.9 |
359.8 |