PDB Chemical Component BOR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BOR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O1 |
B |
1.445 |
1.420 |
| O1 |
HO1 |
0.950 |
0.967 |
| B |
O2 |
1.491 |
1.420 |
| B |
CA |
1.705 |
1.570 |
| O2 |
HO2 |
0.950 |
0.967 |
| CA |
N |
1.463 |
1.469 |
| CA |
CB |
1.538 |
1.530 |
| CA |
HA |
1.100 |
1.089 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CB |
CG |
1.548 |
1.530 |
| CB |
HB1 |
1.100 |
1.090 |
| CB |
HB2 |
1.100 |
1.090 |
| CG |
CD |
1.546 |
1.530 |
| CG |
HG1 |
1.100 |
1.090 |
| CG |
HG2 |
1.100 |
1.090 |
| CD |
NE |
1.473 |
1.465 |
| CD |
HD1 |
1.099 |
1.089 |
| CD |
HD2 |
1.100 |
1.090 |
| NE |
CZ |
1.333 |
1.375 |
| NE |
HNE |
1.000 |
0.970 |
| CZ |
NH1 |
1.330 |
1.303 |
| CZ |
NH2 |
1.333 |
1.375 |
| NH1 |
HH1 |
1.000 |
0.970 |
| NH2 |
HH21 |
1.000 |
0.970 |
| NH2 |
HH22 |
1.000 |
0.971 |
Bond Angles for BOR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| B |
O1 |
HO1 |
109.5 |
114.0 |
| O1 |
B |
O2 |
106.8 |
120.0 |
| O1 |
B |
CA |
108.0 |
120.0 |
| O2 |
B |
CA |
105.2 |
120.0 |
| B |
O2 |
HO2 |
109.5 |
114.0 |
| B |
CA |
N |
115.2 |
109.5 |
| B |
CA |
CB |
115.7 |
109.4 |
| B |
CA |
HA |
99.6 |
109.5 |
| N |
CA |
CB |
106.7 |
109.5 |
| N |
CA |
HA |
110.0 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.5 |
111.0 |
| CB |
CA |
HA |
109.4 |
109.4 |
| CA |
CB |
CG |
111.2 |
109.5 |
| CA |
CB |
HB1 |
108.9 |
109.5 |
| CA |
CB |
HB2 |
108.9 |
109.5 |
| H |
N |
H2 |
109.4 |
111.0 |
| CG |
CB |
HB1 |
108.9 |
109.5 |
| CG |
CB |
HB2 |
108.9 |
109.5 |
| CB |
CG |
CD |
120.1 |
109.5 |
| CB |
CG |
HG1 |
106.1 |
109.4 |
| CB |
CG |
HG2 |
106.1 |
109.4 |
| HB1 |
CB |
HB2 |
110.0 |
109.4 |
| CD |
CG |
HG1 |
106.1 |
109.5 |
| CD |
CG |
HG2 |
106.1 |
109.4 |
| CG |
CD |
NE |
111.2 |
109.4 |
| CG |
CD |
HD1 |
108.9 |
109.5 |
| CG |
CD |
HD2 |
108.9 |
109.4 |
| HG1 |
CG |
HG2 |
112.6 |
109.5 |
| NE |
CD |
HD1 |
108.9 |
109.5 |
| NE |
CD |
HD2 |
108.9 |
109.5 |
| CD |
NE |
CZ |
124.7 |
120.0 |
| CD |
NE |
HNE |
117.7 |
120.1 |
| HD1 |
CD |
HD2 |
110.0 |
109.5 |
| CZ |
NE |
HNE |
117.7 |
120.0 |
| NE |
CZ |
NH1 |
119.8 |
120.0 |
| NE |
CZ |
NH2 |
120.3 |
120.0 |
| NH1 |
CZ |
NH2 |
119.9 |
120.0 |
| CZ |
NH1 |
HH1 |
112.0 |
120.1 |
| CZ |
NH2 |
HH21 |
120.0 |
120.0 |
| CZ |
NH2 |
HH22 |
120.0 |
120.0 |
| HH21 |
NH2 |
HH22 |
120.0 |
119.9 |
Torsion Angles for BOR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
B |
O1 |
CA |
112.8 |
179.9 |
| O1 |
B |
O2 |
HO2 |
180.0 |
0.0 |
| O1 |
B |
CA |
N |
141.2 |
150.0 |
| O1 |
B |
CA |
CB |
266.5 |
270.0 |
| O1 |
B |
CA |
HA |
23.6 |
29.9 |
| HO1 |
O1 |
B |
O2 |
180.0 |
180.0 |
| HO1 |
O1 |
B |
CA |
67.2 |
0.1 |
| O2 |
B |
O1 |
HO1 |
180.0 |
180.0 |
| O1 |
B |
O2 |
CA |
245.4 |
180.1 |
| O2 |
B |
CA |
N |
27.4 |
330.1 |
| O2 |
B |
CA |
CB |
152.7 |
90.0 |
| O2 |
B |
CA |
HA |
269.8 |
210.0 |
| CA |
B |
O1 |
HO1 |
67.2 |
0.1 |
| O1 |
B |
CA |
O2 |
113.8 |
179.9 |
| CA |
B |
O2 |
HO2 |
294.7 |
179.9 |
| N |
CA |
B |
CB |
234.7 |
240.0 |
| N |
CA |
B |
HA |
117.6 |
120.0 |
| B |
CA |
N |
H |
180.0 |
59.9 |
| B |
CA |
N |
H2 |
300.0 |
183.9 |
| CB |
CA |
B |
HA |
242.9 |
240.0 |
| B |
CA |
CB |
CG |
157.5 |
60.0 |
| B |
CA |
CB |
HB1 |
277.5 |
180.0 |
| B |
CA |
CB |
HB2 |
37.5 |
300.0 |
| HO2 |
O2 |
B |
CA |
294.7 |
179.9 |
| B |
CA |
N |
CB |
129.9 |
120.0 |
| B |
CA |
N |
HA |
248.4 |
239.9 |
| CB |
CA |
N |
HA |
118.5 |
120.0 |
| N |
CA |
CB |
CG |
287.1 |
180.0 |
| N |
CA |
CB |
HB1 |
47.1 |
300.0 |
| N |
CA |
CB |
HB2 |
167.1 |
60.0 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| B |
CA |
CB |
N |
230.4 |
240.0 |
| B |
CA |
CB |
HA |
111.5 |
120.0 |
| N |
CA |
CB |
HA |
241.0 |
240.0 |
| CB |
CA |
N |
H |
50.1 |
300.0 |
| CB |
CA |
N |
H2 |
170.1 |
63.9 |
| CG |
CB |
CA |
HB1 |
240.0 |
240.0 |
| CG |
CB |
CA |
HB2 |
120.0 |
120.0 |
| CA |
CB |
CG |
CD |
178.6 |
180.0 |
| CA |
CB |
CG |
HG1 |
298.6 |
300.0 |
| CA |
CB |
CG |
HG2 |
58.6 |
60.0 |
| HB1 |
CB |
CA |
HB2 |
240.0 |
240.1 |
| B |
CA |
HA |
N |
121.4 |
120.0 |
| B |
CA |
HA |
CB |
238.3 |
240.0 |
| N |
CA |
HA |
CB |
116.9 |
120.0 |
| HA |
CA |
N |
H |
291.6 |
180.0 |
| HA |
CA |
N |
H2 |
51.6 |
303.9 |
| HA |
CA |
CB |
CG |
46.1 |
300.0 |
| HA |
CA |
CB |
HB1 |
166.1 |
60.0 |
| HA |
CA |
CB |
HB2 |
286.0 |
180.0 |
| H |
N |
CA |
CB |
50.1 |
300.0 |
| H |
N |
CA |
HA |
291.6 |
180.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H2 |
N |
CA |
CB |
170.1 |
63.9 |
| H2 |
N |
CA |
HA |
51.6 |
303.9 |
| CA |
N |
H2 |
H |
240.0 |
236.0 |
| CG |
CB |
CA |
HA |
46.1 |
300.0 |
| CA |
CB |
CG |
HB1 |
120.0 |
120.0 |
| CA |
CB |
CG |
HB2 |
240.0 |
240.0 |
| HB1 |
CB |
CG |
HB2 |
120.0 |
120.0 |
| CD |
CG |
CB |
HG1 |
240.0 |
240.0 |
| CD |
CG |
CB |
HG2 |
120.0 |
119.9 |
| CB |
CG |
CD |
NE |
179.1 |
180.0 |
| CB |
CG |
CD |
HD1 |
299.1 |
300.0 |
| CB |
CG |
CD |
HD2 |
59.1 |
60.1 |
| HG1 |
CG |
CB |
HG2 |
240.0 |
239.9 |
| HB1 |
CB |
CA |
HA |
166.1 |
60.0 |
| CA |
CB |
HB1 |
CG |
238.6 |
240.0 |
| CA |
CB |
HB1 |
HB2 |
119.3 |
120.0 |
| CG |
CB |
HB1 |
HB2 |
240.7 |
240.0 |
| HB1 |
CB |
CG |
CD |
58.6 |
59.9 |
| HB1 |
CB |
CG |
HG1 |
178.6 |
179.9 |
| HB1 |
CB |
CG |
HG2 |
298.6 |
300.0 |
| HB2 |
CB |
CA |
HA |
286.0 |
180.0 |
| CA |
CB |
HB2 |
CG |
121.4 |
120.0 |
| CA |
CB |
HB2 |
HB1 |
240.7 |
240.0 |
| CG |
CB |
HB2 |
HB1 |
119.3 |
120.0 |
| HB2 |
CB |
CG |
CD |
298.6 |
300.0 |
| HB2 |
CB |
CG |
HG1 |
58.6 |
60.0 |
| HB2 |
CB |
CG |
HG2 |
178.6 |
180.0 |
| CD |
CG |
CB |
HB1 |
58.6 |
59.9 |
| CD |
CG |
CB |
HB2 |
298.6 |
300.0 |
| CB |
CG |
CD |
HG1 |
120.0 |
120.0 |
| CB |
CG |
CD |
HG2 |
240.0 |
240.1 |
| HG1 |
CG |
CD |
HG2 |
120.0 |
120.1 |
| NE |
CD |
CG |
HD1 |
240.0 |
240.0 |
| NE |
CD |
CG |
HD2 |
120.0 |
119.9 |
| CG |
CD |
NE |
CZ |
167.9 |
180.1 |
| CG |
CD |
NE |
HNE |
347.9 |
360.0 |
| HD1 |
CD |
CG |
HD2 |
240.0 |
240.0 |
| HG1 |
CG |
CB |
HB1 |
178.6 |
179.9 |
| HG1 |
CG |
CB |
HB2 |
58.6 |
60.0 |
| CB |
CG |
HG1 |
CD |
231.2 |
240.0 |
| CB |
CG |
HG1 |
HG2 |
115.6 |
120.0 |
| CD |
CG |
HG1 |
HG2 |
244.4 |
240.0 |
| HG1 |
CG |
CD |
NE |
59.1 |
60.0 |
| HG1 |
CG |
CD |
HD1 |
179.1 |
180.1 |
| HG1 |
CG |
CD |
HD2 |
299.0 |
300.1 |
| HG2 |
CG |
CB |
HB1 |
298.6 |
300.0 |
| HG2 |
CG |
CB |
HB2 |
178.6 |
180.0 |
| CB |
CG |
HG2 |
CD |
128.7 |
120.0 |
| CB |
CG |
HG2 |
HG1 |
244.4 |
240.0 |
| CD |
CG |
HG2 |
HG1 |
115.6 |
120.1 |
| HG2 |
CG |
CD |
NE |
299.1 |
299.9 |
| HG2 |
CG |
CD |
HD1 |
59.1 |
60.0 |
| HG2 |
CG |
CD |
HD2 |
179.1 |
180.0 |
| NE |
CD |
CG |
HG1 |
59.1 |
60.0 |
| NE |
CD |
CG |
HG2 |
299.1 |
299.9 |
| CG |
CD |
NE |
HD1 |
120.0 |
120.0 |
| CG |
CD |
NE |
HD2 |
240.0 |
240.1 |
| HD1 |
CD |
NE |
HD2 |
120.0 |
120.1 |
| CZ |
NE |
CD |
HNE |
180.0 |
180.1 |
| CD |
NE |
CZ |
NH1 |
0.1 |
359.9 |
| CD |
NE |
CZ |
NH2 |
180.6 |
180.0 |
| HD1 |
CD |
CG |
HG1 |
179.1 |
180.1 |
| HD1 |
CD |
CG |
HG2 |
59.1 |
60.0 |
| CG |
CD |
HD1 |
NE |
238.6 |
240.0 |
| CG |
CD |
HD1 |
HD2 |
119.2 |
120.0 |
| NE |
CD |
HD1 |
HD2 |
240.7 |
240.0 |
| HD1 |
CD |
NE |
CZ |
47.9 |
60.1 |
| HD1 |
CD |
NE |
HNE |
227.9 |
240.0 |
| HD2 |
CD |
CG |
HG1 |
299.0 |
300.1 |
| HD2 |
CD |
CG |
HG2 |
179.1 |
180.0 |
| CG |
CD |
HD2 |
NE |
121.4 |
119.9 |
| CG |
CD |
HD2 |
HD1 |
240.7 |
240.0 |
| NE |
CD |
HD2 |
HD1 |
119.3 |
120.1 |
| HD2 |
CD |
NE |
CZ |
287.9 |
300.0 |
| HD2 |
CD |
NE |
HNE |
107.9 |
119.9 |
| CZ |
NE |
CD |
HD1 |
47.9 |
60.1 |
| CZ |
NE |
CD |
HD2 |
287.9 |
300.0 |
| CD |
NE |
CZ |
HNE |
180.0 |
179.9 |
| NH1 |
CZ |
NE |
NH2 |
179.4 |
179.9 |
| NE |
CZ |
NH1 |
HH1 |
180.6 |
180.1 |
| NE |
CZ |
NH2 |
HH21 |
179.5 |
359.9 |
| NE |
CZ |
NH2 |
HH22 |
359.4 |
180.0 |
| HNE |
NE |
CD |
HD1 |
227.9 |
240.0 |
| HNE |
NE |
CD |
HD2 |
107.9 |
119.9 |
| CD |
NE |
HNE |
CZ |
180.0 |
180.1 |
| HNE |
NE |
CZ |
NH1 |
180.1 |
180.0 |
| HNE |
NE |
CZ |
NH2 |
0.6 |
0.1 |
| NH1 |
CZ |
NE |
HNE |
180.1 |
180.0 |
| NE |
CZ |
NH1 |
NH2 |
180.5 |
180.1 |
| NH1 |
CZ |
NH2 |
HH21 |
0.0 |
180.0 |
| NH1 |
CZ |
NH2 |
HH22 |
180.0 |
0.1 |
| NH2 |
CZ |
NE |
HNE |
0.6 |
0.1 |
| NE |
CZ |
NH2 |
NH1 |
179.4 |
179.9 |
| NH2 |
CZ |
NH1 |
HH1 |
0.0 |
360.0 |
| HH21 |
NH2 |
CZ |
HH22 |
180.0 |
180.0 |
| HH1 |
NH1 |
CZ |
NH2 |
0.0 |
360.0 |
| CZ |
NH2 |
HH21 |
HH22 |
180.0 |
180.0 |
| CZ |
NH2 |
HH22 |
HH21 |
180.0 |
180.0 |