PDB Chemical Component BOM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BOM

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C2 1.392 1.428
O1 HO1 0.950 0.967
C2 C4 1.518 1.530
C2 H21 1.114 1.090
C2 H22 1.115 1.091
C4 C7 1.520 1.530
C4 H41 1.115 1.090
C4 H42 1.114 1.090
C7 C10 1.528 1.529
C7 H71 1.115 1.090
C7 H72 1.115 1.090
C10 C13 1.525 1.529
C10 H101 1.116 1.090
C10 H102 1.115 1.090
C13 C16 1.523 1.529
C13 H131 1.115 1.090
C13 H132 1.116 1.090
C16 C19 1.530 1.530
C16 H161 1.115 1.090
C16 H162 1.115 1.090
C19 C22 1.545 1.529
C19 H191 1.114 1.090
C19 H192 1.115 1.089
C22 C25 1.530 1.530
C22 H221 1.116 1.089
C22 H222 1.114 1.090
C25 C28 1.541 1.507
C25 H251 1.114 1.090
C25 H252 1.116 1.089
C28 C31 1.353 1.328
C28 H281 1.103 1.080
C31 C33 1.420 1.472
C31 H311 1.103 1.079
C33 C35 1.334 1.329
C33 H331 1.104 1.080
C35 C37 1.495 1.507
C35 H351 1.103 1.080
C37 C39 1.519 1.529
C37 H371 1.115 1.090
C37 H372 1.115 1.090
C39 C42 1.528 1.530
C39 H391 1.115 1.089
C39 H392 1.115 1.090
C42 H421 1.114 1.090
C42 H422 1.115 1.089
C42 H423 1.114 1.090

Bond Angles for BOM

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 O1 HO1 117.0 106.8
O1 C2 C4 116.9 109.5
O1 C2 H21 109.5 109.5
O1 C2 H22 109.5 109.5
C4 C2 H21 109.5 109.4
C4 C2 H22 109.5 109.4
C2 C4 C7 117.1 109.5
C2 C4 H41 109.5 109.4
C2 C4 H42 109.5 109.5
H21 C2 H22 100.7 109.4
C7 C4 H41 109.4 109.5
C7 C4 H42 109.5 109.5
C4 C7 C10 112.4 109.5
C4 C7 H71 111.2 109.4
C4 C7 H72 111.1 109.5
H41 C4 H42 100.7 109.4
C10 C7 H71 111.1 109.4
C10 C7 H72 111.1 109.5
C7 C10 C13 117.6 109.5
C7 C10 H101 109.3 109.5
C7 C10 H102 109.3 109.4
H71 C7 H72 99.3 109.5
C13 C10 H101 109.2 109.4
C13 C10 H102 109.2 109.4
C10 C13 C16 113.5 109.6
C10 C13 H131 110.8 109.4
C10 C13 H132 110.8 109.5
H101 C10 H102 100.9 109.5
C16 C13 H131 110.7 109.4
C16 C13 H132 110.7 109.5
C13 C16 C19 117.8 109.5
C13 C16 H161 109.2 109.4
C13 C16 H162 109.2 109.5
H131 C13 H132 99.6 109.4
C19 C16 H161 109.2 109.4
C19 C16 H162 109.2 109.5
C16 C19 C22 110.1 109.5
C16 C19 H191 112.0 109.4
C16 C19 H192 112.0 109.5
H161 C16 H162 100.9 109.4
C22 C19 H191 112.0 109.5
C22 C19 H192 111.9 109.5
C19 C22 C25 113.7 109.4
C19 C22 H221 110.7 109.5
C19 C22 H222 110.7 109.5
H191 C19 H192 98.5 109.5
C25 C22 H221 110.6 109.4
C25 C22 H222 110.6 109.5
C22 C25 C28 114.1 109.5
C22 C25 H251 110.5 109.5
C22 C25 H252 110.5 109.5
H221 C22 H222 99.6 109.5
C28 C25 H251 110.5 109.5
C28 C25 H252 110.5 109.5
C25 C28 C31 117.2 120.0
C25 C28 H281 127.4 120.0
H251 C25 H252 99.8 109.4
C31 C28 H281 115.4 120.0
C28 C31 C33 130.1 120.0
C28 C31 H311 112.0 120.1
C33 C31 H311 117.9 120.0
C31 C33 C35 129.4 120.0
C31 C33 H331 119.1 120.0
C35 C33 H331 111.5 120.0
C33 C35 C37 131.7 120.0
C33 C35 H351 106.9 120.0
C37 C35 H351 121.3 120.0
C35 C37 C39 114.6 109.5
C35 C37 H371 110.3 109.5
C35 C37 H372 110.3 109.5
C39 C37 H371 110.4 109.5
C39 C37 H372 110.4 109.5
C37 C39 C42 123.2 109.5
C37 C39 H391 107.3 109.5
C37 C39 H392 107.3 109.4
H371 C37 H372 99.9 109.5
C42 C39 H391 107.4 109.5
C42 C39 H392 107.4 109.4
C39 C42 H421 123.2 109.5
C39 C42 H422 107.3 109.5
C39 C42 H423 107.3 109.5
H391 C39 H392 102.4 109.5
H421 C42 H422 107.3 109.5
H421 C42 H423 107.4 109.5
H422 C42 H423 102.4 109.4

Torsion Angles for BOM

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C2 O1 H21 234.7 120.0
C4 C2 O1 H22 125.2 240.0
O1 C2 C4 C7 259.5 180.0
O1 C2 C4 H41 24.7 60.0
O1 C2 C4 H42 134.2 300.0
H21 C2 O1 H22 250.5 120.0
HO1 O1 C2 C4 179.9 180.1
HO1 O1 C2 H21 305.2 60.1
HO1 O1 C2 H22 54.7 300.1
C4 C2 O1 HO1 179.9 180.1
O1 C2 C4 H21 125.2 240.0
O1 C2 C4 H22 234.8 120.1
H21 C2 C4 H22 109.6 240.1
C7 C4 C2 H41 234.8 120.0
C7 C4 C2 H42 125.3 239.9
C2 C4 C7 C10 128.4 180.0
C2 C4 C7 H71 253.7 60.0
C2 C4 C7 H72 3.3 300.0
H41 C4 C2 H42 250.5 119.9
H21 C2 O1 HO1 305.2 60.1
O1 C2 H21 C4 230.6 120.1
O1 C2 H21 H22 115.3 240.0
C4 C2 H21 H22 244.7 119.9
H21 C2 C4 C7 134.3 300.0
H21 C2 C4 H41 259.5 180.0
H21 C2 C4 H42 9.0 60.1
H22 C2 O1 HO1 54.7 300.1
O1 C2 H22 C4 129.4 239.9
O1 C2 H22 H21 244.7 120.0
C4 C2 H22 H21 115.3 240.1
H22 C2 C4 C7 24.7 59.9
H22 C2 C4 H41 149.9 299.9
H22 C2 C4 H42 259.4 180.0
C7 C4 C2 H21 134.3 300.0
C7 C4 C2 H22 24.7 59.9
C2 C4 C7 H41 125.2 240.0
C2 C4 C7 H42 234.7 120.0
H41 C4 C7 H42 109.5 240.0
C10 C7 C4 H71 234.8 120.0
C10 C7 C4 H72 125.2 240.0
C4 C7 C10 C13 263.5 180.0
C4 C7 C10 H101 28.8 60.0
C4 C7 C10 H102 138.3 300.0
H71 C7 C4 H72 250.4 120.0
H41 C4 C2 H21 259.5 180.0
H41 C4 C2 H22 149.9 299.9
C2 C4 H41 C7 230.5 120.1
C2 C4 H41 H42 115.2 240.1
C7 C4 H41 H42 244.7 120.0
H41 C4 C7 C10 3.2 300.0
H41 C4 C7 H71 128.5 180.0
H41 C4 C7 H72 238.0 60.0
H42 C4 C2 H21 9.0 60.1
H42 C4 C2 H22 259.4 180.0
C2 C4 H42 C7 129.6 239.9
C2 C4 H42 H41 244.8 119.9
C7 C4 H42 H41 115.2 240.0
H42 C4 C7 C10 253.7 60.0
H42 C4 C7 H71 19.0 300.0
H42 C4 C7 H72 128.5 180.0
C10 C7 C4 H41 3.2 300.0
C10 C7 C4 H42 253.7 60.0
C4 C7 C10 H71 125.3 240.1
C4 C7 C10 H72 234.8 120.1
H71 C7 C10 H72 109.5 240.0
C13 C10 C7 H101 234.8 120.0
C13 C10 C7 H102 125.3 240.0
C7 C10 C13 C16 183.2 180.0
C7 C10 C13 H131 308.5 60.0
C7 C10 C13 H132 58.0 300.0
H101 C10 C7 H102 250.5 120.0
H71 C7 C4 H41 128.5 180.0
H71 C7 C4 H42 19.0 300.0
C4 C7 H71 C10 234.0 120.0
C4 C7 H71 H72 117.1 240.0
C10 C7 H71 H72 243.0 120.0
H71 C7 C10 C13 138.3 300.0
H71 C7 C10 H101 263.5 180.0
H71 C7 C10 H102 13.0 60.0
H72 C7 C4 H41 238.0 60.0
H72 C7 C4 H42 128.5 180.0
C4 C7 H72 C10 125.9 239.9
C4 C7 H72 H71 242.9 119.9
C10 C7 H72 H71 117.0 240.0
H72 C7 C10 C13 28.8 60.0
H72 C7 C10 H101 154.0 300.0
H72 C7 C10 H102 263.5 179.9
C13 C10 C7 H71 138.3 300.0
C13 C10 C7 H72 28.8 60.0
C7 C10 C13 H101 125.2 240.0
C7 C10 C13 H102 234.7 120.0
H101 C10 C13 H102 109.5 240.0
C16 C13 C10 H131 234.7 120.0
C16 C13 C10 H132 125.2 239.9
C10 C13 C16 C19 244.4 180.0
C10 C13 C16 H161 9.6 60.0
C10 C13 C16 H162 119.1 300.1
H131 C13 C10 H132 250.5 119.9
H101 C10 C7 H71 263.5 180.0
H101 C10 C7 H72 154.0 300.0
C7 C10 H101 C13 230.0 120.1
C7 C10 H101 H102 115.1 240.0
C13 C10 H101 H102 245.0 119.9
H101 C10 C13 C16 58.0 300.0
H101 C10 C13 H131 183.3 180.0
H101 C10 C13 H132 292.8 60.1
H102 C10 C7 H71 13.0 60.0
H102 C10 C7 H72 263.5 179.9
C7 C10 H102 C13 130.0 239.9
C7 C10 H102 H101 245.0 120.0
C13 C10 H102 H101 115.0 240.1
H102 C10 C13 C16 308.5 60.0
H102 C10 C13 H131 73.8 300.0
H102 C10 C13 H132 183.3 180.0
C16 C13 C10 H101 58.0 300.0
C16 C13 C10 H102 308.5 60.0
C10 C13 C16 H131 125.3 240.0
C10 C13 C16 H132 234.7 120.0
H131 C13 C16 H132 109.4 240.1
C19 C16 C13 H161 234.7 120.0
C19 C16 C13 H162 125.3 239.9
C13 C16 C19 C22 258.9 180.0
C13 C16 C19 H191 24.2 60.1
C13 C16 C19 H192 133.7 300.0
H161 C16 C13 H162 250.5 119.9
H131 C13 C10 H101 183.3 180.0
H131 C13 C10 H102 73.8 300.0
C10 C13 H131 C16 233.2 120.1
C10 C13 H131 H132 116.6 240.1
C16 C13 H131 H132 243.4 120.0
H131 C13 C16 C19 119.0 300.0
H131 C13 C16 H161 244.3 180.0
H131 C13 C16 H162 353.8 60.1
H132 C13 C10 H101 292.8 60.1
H132 C13 C10 H102 183.3 180.0
C10 C13 H132 C16 126.8 239.9
C10 C13 H132 H131 243.4 119.9
C16 C13 H132 H131 116.6 240.1
H132 C13 C16 C19 9.6 59.9
H132 C13 C16 H161 134.9 299.9
H132 C13 C16 H162 244.4 180.1
C19 C16 C13 H131 119.0 300.0
C19 C16 C13 H132 9.6 59.9
C13 C16 C19 H161 125.3 240.0
C13 C16 C19 H162 234.7 120.1
H161 C16 C19 H162 109.5 240.1
C22 C19 C16 H191 234.7 120.0
C22 C19 C16 H192 125.2 240.0
C16 C19 C22 C25 162.8 180.0
C16 C19 C22 H221 288.1 60.1
C16 C19 C22 H222 37.6 300.0
H191 C19 C16 H192 250.5 120.0
H161 C16 C13 H131 244.3 180.0
H161 C16 C13 H132 134.9 299.9
C13 C16 H161 C19 229.9 120.1
C13 C16 H161 H162 115.0 240.0
C19 C16 H161 H162 245.1 120.0
H161 C16 C19 C22 133.6 300.0
H161 C16 C19 H191 258.9 180.1
H161 C16 C19 H192 8.4 60.0
H162 C16 C13 H131 353.8 60.1
H162 C16 C13 H132 244.4 180.1
C13 C16 H162 C19 130.1 239.9
C13 C16 H162 H161 245.0 119.9
C19 C16 H162 H161 114.9 240.1
H162 C16 C19 C22 24.2 59.9
H162 C16 C19 H191 149.5 299.9
H162 C16 C19 H192 259.0 179.9
C22 C19 C16 H161 133.6 300.0
C22 C19 C16 H162 24.2 59.9
C16 C19 C22 H191 125.3 240.1
C16 C19 C22 H192 234.7 120.0
H191 C19 C22 H192 109.5 239.9
C25 C22 C19 H221 234.8 120.0
C25 C22 C19 H222 125.3 240.0
C19 C22 C25 C28 237.7 180.0
C19 C22 C25 H251 3.0 60.0
C19 C22 C25 H252 112.5 300.0
H221 C22 C19 H222 250.5 120.1
H191 C19 C16 H161 258.9 180.1
H191 C19 C16 H162 149.5 299.9
C16 C19 H191 C22 235.7 119.9
C16 C19 H191 H192 117.9 240.0
C22 C19 H191 H192 242.2 120.1
H191 C19 C22 C25 37.6 299.9
H191 C19 C22 H221 162.8 180.0
H191 C19 C22 H222 272.3 59.9
H192 C19 C16 H161 8.4 60.0
H192 C19 C16 H162 259.0 179.9
C16 C19 H192 C22 124.2 240.0
C16 C19 H192 H191 242.1 120.0
C22 C19 H192 H191 117.9 240.0
H192 C19 C22 C25 288.1 60.0
H192 C19 C22 H221 53.3 300.1
H192 C19 C22 H222 162.8 180.0
C25 C22 C19 H191 37.6 299.9
C25 C22 C19 H192 288.1 60.0
C19 C22 C25 H221 125.2 240.0
C19 C22 C25 H222 234.7 120.0
H221 C22 C25 H222 109.5 240.0
C28 C25 C22 H251 234.7 120.0
C28 C25 C22 H252 125.2 240.0
C22 C25 C28 C31 32.6 120.0
C22 C25 C28 H281 212.6 300.0
H251 C25 C22 H252 250.5 120.0
H221 C22 C19 H191 162.8 180.0
H221 C22 C19 H192 53.3 300.1
C19 C22 H221 C25 233.1 120.0
C19 C22 H221 H222 116.6 239.9
C25 C22 H221 H222 243.5 120.0
H221 C22 C25 C28 112.5 300.0
H221 C22 C25 H251 237.8 180.0
H221 C22 C25 H252 347.3 60.0
H222 C22 C19 H191 272.3 59.9
H222 C22 C19 H192 162.8 180.0
C19 C22 H222 C25 127.0 240.0
C19 C22 H222 H221 243.5 120.1
C25 C22 H222 H221 116.5 240.0
H222 C22 C25 C28 3.0 60.0
H222 C22 C25 H251 128.3 300.0
H222 C22 C25 H252 237.8 180.0
C28 C25 C22 H221 112.5 300.0
C28 C25 C22 H222 3.0 60.0
C22 C25 C28 H251 125.3 240.0
C22 C25 C28 H252 234.8 120.0
H251 C25 C28 H252 109.5 240.0
C31 C28 C25 H281 180.0 180.0
C25 C28 C31 C33 179.0 180.0
C25 C28 C31 H311 359.0 360.0
H251 C25 C22 H221 237.8 180.0
H251 C25 C22 H222 128.3 300.0
C22 C25 H251 C28 232.7 120.0
C22 C25 H251 H252 116.4 240.0
C28 C25 H251 H252 243.7 120.0
H251 C25 C28 C31 267.3 240.0
H251 C25 C28 H281 87.3 60.0
H252 C25 C22 H221 347.3 60.0
H252 C25 C22 H222 237.8 180.0
C22 C25 H252 C28 127.3 240.0
C22 C25 H252 H251 243.6 120.0
C28 C25 H252 H251 116.4 240.0
H252 C25 C28 C31 157.8 360.0
H252 C25 C28 H281 337.8 180.0
C31 C28 C25 H251 267.3 240.0
C31 C28 C25 H252 157.8 360.0
C25 C28 C31 H281 180.0 180.0
C33 C31 C28 H311 180.0 180.1
C28 C31 C33 C35 178.6 185.4
C28 C31 C33 H331 358.6 5.3
H281 C28 C25 H251 87.3 60.0
H281 C28 C25 H252 337.8 180.0
C25 C28 H281 C31 180.0 180.0
H281 C28 C31 C33 359.0 0.0
H281 C28 C31 H311 179.0 180.0
C33 C31 C28 H281 359.0 0.0
C28 C31 C33 H311 180.0 179.9
C35 C33 C31 H331 180.0 180.0
C31 C33 C35 C37 0.9 6.2
C31 C33 C35 H351 180.9 186.3
H311 C31 C28 H281 179.0 180.0
C28 C31 H311 C33 180.0 180.1
H311 C31 C33 C35 358.6 5.4
H311 C31 C33 H331 178.7 185.4
C35 C33 C31 H311 358.6 5.4
C31 C33 C35 H331 180.0 180.0
C37 C35 C33 H351 179.9 180.0
C33 C35 C37 C39 188.7 126.4
C33 C35 C37 H371 313.9 6.3
C33 C35 C37 H372 63.4 246.3
H331 C33 C31 H311 178.7 185.4
C31 C33 H331 C35 180.0 180.0
H331 C33 C35 C37 180.8 186.3
H331 C33 C35 H351 0.9 6.3
C37 C35 C33 H331 180.8 186.3
C33 C35 C37 H351 180.1 180.0
C39 C37 C35 H371 234.7 120.0
C39 C37 C35 H372 125.3 240.0
C35 C37 C39 C42 153.1 180.0
C35 C37 C39 H391 278.4 60.0
C35 C37 C39 H392 27.8 300.0
H371 C37 C35 H372 250.6 120.0
H351 C35 C33 H331 0.9 6.3
C33 C35 H351 C37 179.9 180.0
H351 C35 C37 C39 8.6 306.3
H351 C35 C37 H371 133.9 186.3
H351 C35 C37 H372 243.3 66.3
C39 C37 C35 H351 8.6 306.3
C35 C37 C39 H371 125.2 240.0
C35 C37 C39 H372 234.7 120.0
H371 C37 C39 H372 109.5 240.0
C42 C39 C37 H391 234.7 120.1
C42 C39 C37 H392 125.3 240.1
C37 C39 C42 H421 180.0 180.0
C37 C39 C42 H422 305.2 300.0
C37 C39 C42 H423 54.7 59.9
H391 C39 C37 H392 250.6 120.0
H371 C37 C35 H351 133.9 186.3
C35 C37 H371 C39 232.4 120.0
C35 C37 H371 H372 116.1 240.0
C39 C37 H371 H372 243.8 120.0
H371 C37 C39 C42 27.9 300.0
H371 C37 C39 H391 153.1 180.0
H371 C37 C39 H392 262.6 60.0
H372 C37 C35 H351 243.3 66.3
C35 C37 H372 C39 127.7 240.0
C35 C37 H372 H371 243.9 120.0
C39 C37 H372 H371 116.2 239.9
H372 C37 C39 C42 278.3 60.0
H372 C37 C39 H391 43.6 300.0
H372 C37 C39 H392 153.0 180.0
C42 C39 C37 H371 27.9 300.0
C42 C39 C37 H372 278.3 60.0
C37 C39 C42 H391 125.3 239.9
C37 C39 C42 H392 234.7 119.9
H391 C39 C42 H392 109.5 240.0
H421 C42 C39 H422 234.8 240.0
H421 C42 C39 H423 125.3 120.0
H422 C42 C39 H423 250.5 240.0
H391 C39 C37 H371 153.1 180.0
H391 C39 C37 H372 43.6 300.0
C37 C39 H391 C42 225.7 120.0
C37 C39 H391 H392 112.8 240.0
C42 C39 H391 H392 247.1 120.0
H391 C39 C42 H421 54.7 300.1
H391 C39 C42 H422 180.0 60.1
H391 C39 C42 H423 289.4 180.0
H392 C39 C37 H371 262.6 60.0
H392 C39 C37 H372 153.0 180.0
C37 C39 H392 C42 134.3 240.1
C37 C39 H392 H391 247.2 120.1
C42 C39 H392 H391 112.9 240.0
H392 C39 C42 H421 305.3 60.1
H392 C39 C42 H422 70.5 180.1
H392 C39 C42 H423 180.0 300.0
H421 C42 C39 H391 54.7 300.1
H421 C42 C39 H392 305.3 60.1
C39 C42 H421 H422 125.2 120.0
C39 C42 H421 H423 234.7 240.0
H422 C42 H421 H423 109.5 120.0
H422 C42 C39 H391 180.0 60.1
H422 C42 C39 H392 70.5 180.1
C39 C42 H422 H421 225.7 240.0
C39 C42 H422 H423 112.8 120.0
H421 C42 H422 H423 247.1 240.0
H423 C42 C39 H391 289.4 180.0
H423 C42 C39 H392 180.0 300.0
C39 C42 H423 H421 134.3 120.1
C39 C42 H423 H422 247.2 240.0
H421 C42 H423 H422 112.9 120.0