PDB Chemical Component BMK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BMK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C12 C8 1.396 1.390
C12 C13 1.403 1.379
C8 C2 1.383 1.373
C13 C9 1.395 1.390
C2 C3 1.456 1.439
C2 C 1.485 1.511
C9 C3 1.382 1.382
C7 C 1.524 1.531
C3 C1 1.471 1.501
C C5 1.488 1.518
C N 1.448 1.496
C10 C5 1.386 1.380
C10 C14 1.391 1.384
C5 C6 1.488 1.380
C14 C15 1.391 1.383
N C1 1.455 1.493
C1 C4 1.523 1.531
C6 C4 1.521 1.507
C6 C11 1.388 1.386
C15 C11 1.391 1.381
C7 H1 1.101 1.090
C7 H2 1.100 1.090
C7 H3 1.100 1.090
C10 H4 1.080 1.080
C14 H5 1.080 1.080
C15 H6 1.080 1.080
C11 H7 1.080 1.080
C4 H8 1.100 1.090
C4 H9 1.100 1.090
C1 H10 1.100 1.090
N H11 1.000 1.009
C9 H13 1.080 1.080
C13 H14 1.080 1.081
C12 H15 1.080 1.080
C8 H16 1.080 1.081

Bond Angles for BMK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C12 C8 C2 116.3 118.7
C8 C12 H15 118.9 119.2
C12 C8 H16 121.9 121.6
C12 C13 H14 118.9 119.2
C2 C8 H16 121.9 119.6
C13 C9 H13 121.7 121.6
C7 C C5 113.5 113.3
C7 C N 115.0 113.4
C C7 H1 109.5 109.4
C C7 H2 109.5 109.5
C C7 H3 109.5 109.4
C3 C1 H10 113.6 111.3
C5 C N 101.8 105.6
C C5 C6 117.5 119.5
C N C1 110.4 100.9
C N H11 109.3 111.0
C10 C5 C6 119.9 120.7
C10 C14 C15 121.2 119.8
C14 C10 H4 120.4 120.1
C10 C14 H5 119.4 120.1
C5 C6 C4 121.5 121.5
C5 C6 C11 118.4 119.4
C14 C15 C11 121.5 120.2
C15 C14 H5 119.3 120.1
C14 C15 H6 119.2 119.9
N C1 H10 113.8 111.3
C1 C4 H8 108.9 109.2
C1 C4 H9 108.9 109.2
C6 C4 H8 108.9 109.2
C6 C4 H9 108.9 109.2
C6 C11 H7 120.1 119.9
C11 C15 H6 119.3 119.9
C15 C11 H7 120.1 119.9
H1 C7 H2 109.5 109.5
H1 C7 H3 109.5 109.5
H2 C7 H3 109.4 109.5
H8 C4 H9 109.5 109.2

Torsion Angles for BMK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C8 C12 C13 H14 180.1 180.4
C2 C8 C12 H16 180.0 179.8
C12 C13 C9 H13 179.7 180.1
C2 C8 C12 H15 180.1 179.9
C12 C8 C2 H16 180.0 180.2
C2 C3 C1 H10 142.6 142.9
C2 C C7 H1 180.0 299.6
C2 C C7 H2 300.0 59.6
C2 C C7 H3 60.0 179.7
C2 C N H11 158.0 156.3
C9 C3 C1 H10 323.4 323.5
C5 C C7 N 243.3 239.5
C7 C C5 C6 160.1 159.4
C7 C N C1 159.4 163.2
C7 C N H11 279.6 280.0
H1 C7 C H2 240.0 240.0
H1 C7 C H3 120.0 119.9
H2 C7 C H3 240.0 239.9
N C1 C3 H10 239.0 239.5
C3 C1 C4 H8 197.6 308.8
C3 C1 C4 H9 317.0 189.4
C7 C C5 N 124.2 124.8
C5 C C7 H1 309.8 60.7
C5 C C7 H2 69.8 180.7
C5 C C7 H3 189.7 300.7
C5 C N C1 282.6 288.0
C5 C N H11 42.8 44.8
C10 C5 C C6 181.1 180.0
C C5 C6 C4 0.7 359.3
C C5 C6 C11 180.7 179.5
C7 C N C5 236.8 235.3
N C C7 H1 66.5 181.1
N C C7 H2 186.5 301.1
N C C7 H3 306.4 61.2
N C C5 C6 35.9 34.6
C N C1 H10 201.4 201.5
C10 C5 C N 217.1 214.7
C C5 C10 C6 178.8 180.0
C10 C5 C6 C4 179.6 179.2
C10 C5 C6 C11 359.6 359.5
C14 C10 C5 C6 0.3 0.3
C10 C14 C15 C11 359.8 359.9
C15 C14 C10 H5 180.0 180.1
C10 C14 C15 H6 179.8 179.8
C6 C5 C N 35.9 34.6
C5 C6 C4 H8 235.0 125.8
C5 C6 C4 H9 115.7 245.2
C5 C6 C11 H7 180.1 180.4
C15 C14 C10 H4 180.0 180.1
C10 C14 C15 H5 180.0 179.9
C11 C15 C14 H6 180.0 180.0
C14 C15 C11 H7 180.2 180.0
C3 C1 N H10 120.8 120.5
C N C1 H11 120.2 117.4
N C1 C4 H8 91.1 194.9
N C1 C4 H9 210.5 75.5
C N C1 C4 76.1 79.8
C6 C4 C1 H8 239.7 120.3
C6 C4 C1 H9 120.3 239.7
H8 C4 C1 H9 240.6 119.4
C5 C6 C4 C11 180.0 180.2
C1 C4 C6 H8 120.3 239.7
C1 C4 C6 H9 239.7 120.3
C4 C6 C11 H7 0.1 0.6
H8 C4 C6 H9 119.4 240.6
C5 C6 C11 C4 180.0 179.8
C6 C11 C15 H6 180.1 179.9
C15 C11 C6 H7 180.0 180.1
C5 C6 C11 C15 0.1 0.5
C11 C15 C14 H5 179.8 179.9
C14 C15 C11 H6 180.0 180.0
C6 C11 C15 H7 180.0 179.9
H1 C7 C C5 309.8 60.7
H1 C7 C N 66.5 181.1
C C7 H1 H2 120.0 120.0
C C7 H1 H3 240.0 240.1
H2 C7 H1 H3 120.0 120.1
H2 C7 C C5 69.8 180.7
H2 C7 C N 186.5 301.1
C C7 H2 H1 240.0 240.0
C C7 H2 H3 120.0 120.0
H1 C7 H2 H3 240.0 240.0
H3 C7 C C5 189.7 300.7
H3 C7 C N 306.4 61.2
C C7 H3 H1 120.0 119.9
C C7 H3 H2 240.0 240.0
H1 C7 H3 H2 120.0 120.0
H4 C10 C5 C6 180.3 180.3
H4 C10 C14 C15 180.0 180.1
H4 C10 C14 H5 360.0 0.0
C10 C14 H5 C15 180.0 180.1
H5 C14 C10 H4 360.0 0.0
H5 C14 C15 C11 179.8 179.9
H5 C14 C15 H6 359.8 359.9
C14 C15 H6 C11 180.0 180.0
H6 C15 C14 H5 359.8 359.9
H6 C15 C11 H7 0.2 360.0
H7 C11 C15 H6 0.2 360.0
C1 C4 H8 H9 119.0 240.6
C6 C4 H8 H9 241.0 119.3
C1 C4 H9 H8 241.0 119.4
C6 C4 H9 H8 119.0 240.6
H10 C1 C4 H8 325.1 73.1
H10 C1 C4 H9 84.4 313.7
C N H11 C1 239.1 249.1
H11 N C1 H10 81.3 84.1
H14 C13 C9 H13 359.7 0.1
H15 C12 C8 C2 180.1 179.9
H15 C12 C8 H16 0.1 0.1
H15 C12 C13 H14 0.1 0.3
C12 C8 H16 C2 180.0 179.8
H16 C8 C12 H15 0.1 0.1