PDB Chemical Component BMA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BMA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.543 |
1.531 |
C1 |
O1 |
1.408 |
1.429 |
C1 |
O5 |
1.428 |
1.425 |
C1 |
H1 |
1.114 |
1.090 |
C2 |
C3 |
1.558 |
1.532 |
C2 |
O2 |
1.501 |
1.428 |
C2 |
H2 |
1.114 |
1.091 |
C3 |
C4 |
1.643 |
1.532 |
C3 |
O3 |
1.428 |
1.429 |
C3 |
H3 |
1.115 |
1.090 |
C4 |
C5 |
1.658 |
1.530 |
C4 |
O4 |
1.456 |
1.429 |
C4 |
H4 |
1.115 |
1.090 |
C5 |
C6 |
1.600 |
1.530 |
C5 |
O5 |
1.459 |
1.425 |
C5 |
H5 |
1.114 |
1.090 |
C6 |
O6 |
1.478 |
1.429 |
C6 |
H61 |
1.115 |
1.089 |
C6 |
H62 |
1.115 |
1.089 |
O1 |
HO1 |
0.950 |
0.966 |
O2 |
HO2 |
0.950 |
0.967 |
O3 |
HO3 |
0.950 |
0.967 |
O4 |
HO4 |
0.950 |
0.966 |
O6 |
HO6 |
0.949 |
0.966 |
Bond Angles for BMA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
108.7 |
109.4 |
C2 |
C1 |
O5 |
111.0 |
109.8 |
C2 |
C1 |
H1 |
108.3 |
109.4 |
C1 |
C2 |
C3 |
105.5 |
109.0 |
C1 |
C2 |
O2 |
114.9 |
109.6 |
C1 |
C2 |
H2 |
110.1 |
109.5 |
O1 |
C1 |
O5 |
107.2 |
109.4 |
O1 |
C1 |
H1 |
112.0 |
109.4 |
C1 |
O1 |
HO1 |
108.7 |
106.8 |
O5 |
C1 |
H1 |
109.7 |
109.4 |
C1 |
O5 |
C5 |
114.4 |
107.7 |
C3 |
C2 |
O2 |
113.6 |
109.7 |
C3 |
C2 |
H2 |
111.5 |
109.5 |
C2 |
C3 |
C4 |
113.6 |
108.6 |
C2 |
C3 |
O3 |
113.1 |
109.6 |
C2 |
C3 |
H3 |
103.6 |
109.6 |
O2 |
C2 |
H2 |
101.3 |
109.5 |
C2 |
O2 |
HO2 |
114.9 |
106.9 |
C4 |
C3 |
O3 |
108.8 |
109.7 |
C4 |
C3 |
H3 |
108.4 |
109.7 |
C3 |
C4 |
C5 |
114.5 |
109.0 |
C3 |
C4 |
O4 |
111.0 |
109.6 |
C3 |
C4 |
H4 |
104.3 |
109.6 |
O3 |
C3 |
H3 |
109.0 |
109.6 |
C3 |
O3 |
HO3 |
113.0 |
106.8 |
C5 |
C4 |
O4 |
107.9 |
109.6 |
C5 |
C4 |
H4 |
107.7 |
109.6 |
C4 |
C5 |
C6 |
118.6 |
109.4 |
C4 |
C5 |
O5 |
111.4 |
109.8 |
C4 |
C5 |
H5 |
100.1 |
109.4 |
O4 |
C4 |
H4 |
111.4 |
109.5 |
C4 |
O4 |
HO4 |
111.0 |
106.9 |
C6 |
C5 |
O5 |
104.7 |
109.4 |
C6 |
C5 |
H5 |
107.4 |
109.4 |
C5 |
C6 |
O6 |
113.5 |
109.5 |
C5 |
C6 |
H61 |
110.7 |
109.5 |
C5 |
C6 |
H62 |
110.7 |
109.5 |
O5 |
C5 |
H5 |
115.2 |
109.4 |
O6 |
C6 |
H61 |
110.8 |
109.5 |
O6 |
C6 |
H62 |
110.8 |
109.4 |
C6 |
O6 |
HO6 |
113.5 |
106.8 |
H61 |
C6 |
H62 |
99.6 |
109.5 |
Torsion Angles for BMA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O5 |
117.7 |
120.1 |
O1 |
C1 |
C2 |
H1 |
238.1 |
240.2 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
179.7 |
O5 |
C1 |
C2 |
H1 |
120.5 |
120.1 |
C2 |
C1 |
O5 |
C5 |
290.2 |
292.5 |
C3 |
C2 |
C1 |
O2 |
126.0 |
120.0 |
C3 |
C2 |
C1 |
H2 |
239.5 |
240.1 |
C1 |
C2 |
C3 |
C4 |
339.3 |
306.2 |
C1 |
C2 |
C3 |
O3 |
214.6 |
186.3 |
C1 |
C2 |
C3 |
H3 |
96.8 |
66.0 |
O2 |
C2 |
C1 |
H2 |
113.5 |
120.1 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
300.1 |
C2 |
C1 |
O1 |
O5 |
240.0 |
239.7 |
C2 |
C1 |
O1 |
H1 |
119.6 |
119.8 |
O1 |
C1 |
C2 |
C3 |
189.9 |
181.4 |
O1 |
C1 |
C2 |
O2 |
63.9 |
61.3 |
O1 |
C1 |
C2 |
H2 |
310.3 |
301.2 |
O5 |
C1 |
O1 |
H1 |
239.6 |
240.2 |
O1 |
C1 |
O5 |
C5 |
171.6 |
172.4 |
C2 |
C1 |
O5 |
O1 |
118.5 |
120.1 |
C2 |
C1 |
O5 |
H1 |
240.4 |
239.9 |
O5 |
C1 |
C2 |
C3 |
72.2 |
61.2 |
O5 |
C1 |
C2 |
O2 |
306.2 |
301.2 |
O5 |
C1 |
C2 |
H2 |
192.7 |
181.1 |
O1 |
C1 |
O5 |
H1 |
121.8 |
119.8 |
O5 |
C1 |
O1 |
HO1 |
300.1 |
300.0 |
C4 |
C5 |
O5 |
C1 |
12.8 |
67.6 |
C6 |
C5 |
O5 |
C1 |
142.0 |
187.7 |
C1 |
O5 |
C5 |
H5 |
259.7 |
307.5 |
C2 |
C1 |
H1 |
O1 |
240.2 |
240.2 |
C2 |
C1 |
H1 |
O5 |
121.3 |
120.3 |
H1 |
C1 |
C2 |
C3 |
311.8 |
301.2 |
H1 |
C1 |
C2 |
O2 |
185.8 |
181.1 |
H1 |
C1 |
C2 |
H2 |
72.2 |
61.0 |
O1 |
C1 |
H1 |
O5 |
241.1 |
240.1 |
H1 |
C1 |
O1 |
HO1 |
60.4 |
59.9 |
H1 |
C1 |
O5 |
C5 |
49.8 |
52.5 |
C3 |
C2 |
C1 |
O1 |
189.9 |
181.4 |
C3 |
C2 |
C1 |
O5 |
72.2 |
61.2 |
C3 |
C2 |
C1 |
H1 |
311.8 |
301.2 |
C1 |
C2 |
C3 |
O2 |
233.2 |
240.0 |
C1 |
C2 |
C3 |
H2 |
119.5 |
119.8 |
O2 |
C2 |
C3 |
H2 |
246.3 |
239.8 |
C3 |
C2 |
O2 |
HO2 |
58.4 |
180.5 |
C4 |
C3 |
C2 |
O3 |
124.7 |
119.9 |
C4 |
C3 |
C2 |
H3 |
242.6 |
240.2 |
C2 |
C3 |
C4 |
C5 |
333.2 |
53.8 |
C2 |
C3 |
C4 |
O4 |
95.6 |
173.7 |
C2 |
C3 |
C4 |
H4 |
215.7 |
293.9 |
O3 |
C3 |
C2 |
H3 |
117.9 |
120.3 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
300.0 |
O2 |
C2 |
C1 |
O1 |
63.9 |
61.3 |
O2 |
C2 |
C1 |
O5 |
306.2 |
301.2 |
O2 |
C2 |
C1 |
H1 |
185.8 |
181.1 |
C1 |
C2 |
O2 |
C3 |
121.7 |
119.6 |
C1 |
C2 |
O2 |
H2 |
241.4 |
239.9 |
C3 |
C2 |
O2 |
H2 |
119.7 |
120.2 |
O2 |
C2 |
C3 |
C4 |
106.1 |
66.2 |
O2 |
C2 |
C3 |
O3 |
341.4 |
306.3 |
O2 |
C2 |
C3 |
H3 |
223.6 |
186.0 |
H2 |
C2 |
C1 |
O1 |
310.3 |
301.2 |
H2 |
C2 |
C1 |
O5 |
192.7 |
181.1 |
H2 |
C2 |
C1 |
H1 |
72.2 |
61.0 |
C1 |
C2 |
H2 |
C3 |
243.2 |
240.5 |
C1 |
C2 |
H2 |
O2 |
122.0 |
120.2 |
C3 |
C2 |
H2 |
O2 |
238.8 |
239.7 |
H2 |
C2 |
C3 |
C4 |
219.8 |
186.4 |
H2 |
C2 |
C3 |
O3 |
95.1 |
66.5 |
H2 |
C2 |
C3 |
H3 |
337.3 |
306.2 |
H2 |
C2 |
O2 |
HO2 |
298.6 |
60.2 |
C4 |
C3 |
C2 |
O2 |
106.1 |
66.2 |
C4 |
C3 |
C2 |
H2 |
219.8 |
186.4 |
C2 |
C3 |
C4 |
O3 |
233.0 |
240.2 |
C2 |
C3 |
C4 |
H3 |
114.6 |
119.7 |
O3 |
C3 |
C4 |
H3 |
241.6 |
239.5 |
C4 |
C3 |
O3 |
HO3 |
52.7 |
180.8 |
C5 |
C4 |
C3 |
O4 |
237.6 |
240.1 |
C5 |
C4 |
C3 |
H4 |
117.5 |
119.9 |
C3 |
C4 |
C5 |
C6 |
271.6 |
178.6 |
C3 |
C4 |
C5 |
O5 |
33.1 |
298.7 |
C3 |
C4 |
C5 |
H5 |
155.3 |
58.7 |
O4 |
C4 |
C3 |
H4 |
239.9 |
239.8 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
59.9 |
O3 |
C3 |
C2 |
O2 |
341.4 |
306.3 |
O3 |
C3 |
C2 |
H2 |
95.1 |
66.5 |
C2 |
C3 |
O3 |
C4 |
127.3 |
119.2 |
C2 |
C3 |
O3 |
H3 |
245.3 |
239.7 |
C4 |
C3 |
O3 |
H3 |
118.1 |
120.5 |
O3 |
C3 |
C4 |
C5 |
100.1 |
173.6 |
O3 |
C3 |
C4 |
O4 |
222.5 |
293.5 |
O3 |
C3 |
C4 |
H4 |
342.6 |
53.7 |
H3 |
C3 |
C2 |
O2 |
223.6 |
186.0 |
H3 |
C3 |
C2 |
H2 |
337.3 |
306.2 |
C2 |
C3 |
H3 |
C4 |
239.0 |
240.9 |
C2 |
C3 |
H3 |
O3 |
120.7 |
120.3 |
C4 |
C3 |
H3 |
O3 |
241.7 |
239.5 |
H3 |
C3 |
C4 |
C5 |
218.5 |
294.1 |
H3 |
C3 |
C4 |
O4 |
341.0 |
54.0 |
H3 |
C3 |
C4 |
H4 |
101.0 |
174.1 |
H3 |
C3 |
O3 |
HO3 |
294.6 |
60.3 |
C1 |
O5 |
C5 |
C4 |
12.8 |
67.6 |
C5 |
C4 |
C3 |
O3 |
100.1 |
173.6 |
C5 |
C4 |
C3 |
H3 |
218.5 |
294.1 |
C3 |
C4 |
C5 |
O4 |
124.1 |
119.9 |
C3 |
C4 |
C5 |
H4 |
244.5 |
240.1 |
O4 |
C4 |
C5 |
H4 |
120.4 |
120.2 |
C5 |
C4 |
O4 |
HO4 |
306.1 |
179.4 |
C6 |
C5 |
C4 |
O5 |
238.5 |
239.9 |
C6 |
C5 |
C4 |
H5 |
116.3 |
119.8 |
C4 |
C5 |
C6 |
O6 |
245.2 |
180.2 |
C4 |
C5 |
C6 |
H61 |
10.5 |
60.2 |
C4 |
C5 |
C6 |
H62 |
119.9 |
300.1 |
O5 |
C5 |
C4 |
H5 |
237.7 |
239.9 |
O4 |
C4 |
C3 |
O3 |
222.5 |
293.5 |
O4 |
C4 |
C3 |
H3 |
341.0 |
54.0 |
C3 |
C4 |
O4 |
C5 |
233.8 |
240.4 |
C3 |
C4 |
O4 |
H4 |
115.8 |
120.2 |
C5 |
C4 |
O4 |
H4 |
242.0 |
239.8 |
O4 |
C4 |
C5 |
C6 |
147.5 |
58.7 |
O4 |
C4 |
C5 |
O5 |
269.0 |
178.8 |
O4 |
C4 |
C5 |
H5 |
31.2 |
298.8 |
H4 |
C4 |
C3 |
O3 |
342.6 |
53.7 |
H4 |
C4 |
C3 |
H3 |
101.0 |
174.1 |
C3 |
C4 |
H4 |
C5 |
122.0 |
119.6 |
C3 |
C4 |
H4 |
O4 |
240.2 |
239.8 |
C5 |
C4 |
H4 |
O4 |
118.1 |
120.2 |
H4 |
C4 |
C5 |
C6 |
27.2 |
298.5 |
H4 |
C4 |
C5 |
O5 |
148.6 |
58.6 |
H4 |
C4 |
C5 |
H5 |
270.9 |
178.7 |
H4 |
C4 |
O4 |
HO4 |
64.2 |
299.7 |
C1 |
O5 |
C5 |
C6 |
142.0 |
187.7 |
C6 |
C5 |
C4 |
O4 |
147.5 |
58.7 |
C6 |
C5 |
C4 |
H4 |
27.2 |
298.5 |
C4 |
C5 |
C6 |
O5 |
124.8 |
120.3 |
C4 |
C5 |
C6 |
H5 |
247.7 |
240.2 |
O5 |
C5 |
C6 |
H5 |
122.9 |
119.8 |
O6 |
C6 |
C5 |
H61 |
234.7 |
120.0 |
O6 |
C6 |
C5 |
H62 |
125.3 |
240.1 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
H61 |
C6 |
C5 |
H62 |
250.6 |
120.1 |
C5 |
O5 |
C1 |
H1 |
49.8 |
52.5 |
O5 |
C5 |
C4 |
O4 |
269.0 |
178.8 |
O5 |
C5 |
C4 |
H4 |
148.6 |
58.6 |
C4 |
C5 |
O5 |
C6 |
230.7 |
239.9 |
C4 |
C5 |
O5 |
H5 |
113.1 |
120.1 |
C6 |
C5 |
O5 |
H5 |
242.4 |
240.2 |
O5 |
C5 |
C6 |
O6 |
120.4 |
59.9 |
O5 |
C5 |
C6 |
H61 |
245.7 |
299.9 |
O5 |
C5 |
C6 |
H62 |
355.1 |
179.8 |
H5 |
C5 |
C4 |
O4 |
31.2 |
298.8 |
H5 |
C5 |
C4 |
H4 |
270.9 |
178.7 |
C4 |
C5 |
H5 |
C6 |
124.4 |
119.8 |
C4 |
C5 |
H5 |
O5 |
240.5 |
239.7 |
C6 |
C5 |
H5 |
O5 |
116.1 |
119.9 |
H5 |
C5 |
C6 |
O6 |
357.5 |
300.0 |
H5 |
C5 |
C6 |
H61 |
122.8 |
180.0 |
H5 |
C5 |
C6 |
H62 |
232.2 |
59.9 |
O6 |
C6 |
C5 |
O5 |
120.4 |
59.9 |
O6 |
C6 |
C5 |
H5 |
357.5 |
300.0 |
C5 |
C6 |
O6 |
H61 |
125.2 |
240.0 |
C5 |
C6 |
O6 |
H62 |
234.8 |
120.0 |
H61 |
C6 |
O6 |
H62 |
109.5 |
240.0 |
H61 |
C6 |
C5 |
O5 |
245.7 |
299.9 |
H61 |
C6 |
C5 |
H5 |
122.8 |
180.0 |
C5 |
C6 |
H61 |
O6 |
233.2 |
120.0 |
C5 |
C6 |
H61 |
H62 |
116.5 |
239.9 |
O6 |
C6 |
H61 |
H62 |
243.3 |
119.9 |
H61 |
C6 |
O6 |
HO6 |
54.8 |
300.0 |
H62 |
C6 |
C5 |
O5 |
355.1 |
179.8 |
H62 |
C6 |
C5 |
H5 |
232.2 |
59.9 |
C5 |
C6 |
H62 |
O6 |
126.8 |
240.0 |
C5 |
C6 |
H62 |
H61 |
243.4 |
120.0 |
O6 |
C6 |
H62 |
H61 |
116.6 |
240.0 |
H62 |
C6 |
O6 |
HO6 |
305.3 |
60.0 |
HO1 |
O1 |
C1 |
O5 |
300.1 |
300.0 |
HO1 |
O1 |
C1 |
H1 |
60.4 |
59.9 |
HO2 |
O2 |
C2 |
H2 |
298.6 |
60.2 |
HO3 |
O3 |
C3 |
H3 |
294.6 |
60.3 |
HO4 |
O4 |
C4 |
H4 |
64.2 |
299.7 |
HO6 |
O6 |
C6 |
H61 |
54.8 |
300.0 |
HO6 |
O6 |
C6 |
H62 |
305.3 |
60.0 |