PDB Chemical Component BJH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BJH
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C1 |
1.543 |
1.530 |
C2 |
C5 |
1.543 |
1.506 |
C2 |
H21 |
1.116 |
1.090 |
C2 |
H22 |
1.115 |
1.089 |
C1 |
N1 |
1.462 |
1.465 |
C1 |
B |
1.606 |
1.569 |
C1 |
H1 |
1.115 |
1.090 |
N1 |
C3 |
1.338 |
1.347 |
N1 |
HN1 |
1.021 |
0.970 |
C3 |
C4 |
1.548 |
1.507 |
C3 |
O2 |
1.237 |
1.213 |
C4 |
H41 |
1.114 |
1.089 |
C4 |
H42 |
1.115 |
1.090 |
C4 |
H43 |
1.115 |
1.090 |
C11 |
O3 |
1.251 |
1.347 |
C11 |
O4 |
1.264 |
1.215 |
C11 |
C9 |
1.543 |
1.473 |
O3 |
HO3 |
0.949 |
0.967 |
B |
OB1 |
1.517 |
1.420 |
B |
OB2 |
1.462 |
1.419 |
OB1 |
HOB1 |
0.951 |
0.966 |
C6 |
C5 |
1.542 |
1.381 |
C6 |
C7 |
1.554 |
1.385 |
C6 |
H6 |
1.103 |
1.079 |
C5 |
C10 |
1.532 |
1.387 |
C7 |
C8 |
1.561 |
1.378 |
C7 |
H7 |
1.102 |
1.080 |
C10 |
C9 |
1.521 |
1.402 |
C10 |
O5 |
1.249 |
1.355 |
C8 |
C9 |
1.539 |
1.397 |
C8 |
H8 |
1.103 |
1.079 |
OB2 |
HOB2 |
0.951 |
0.967 |
O5 |
HO5 |
0.950 |
0.968 |
Bond Angles for BJH
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C5 |
111.1 |
109.4 |
C1 |
C2 |
H21 |
111.6 |
109.5 |
C1 |
C2 |
H22 |
111.6 |
109.5 |
C2 |
C1 |
N1 |
110.2 |
109.5 |
C2 |
C1 |
B |
111.9 |
109.5 |
C2 |
C1 |
H1 |
107.7 |
109.5 |
C5 |
C2 |
H21 |
111.6 |
109.5 |
C5 |
C2 |
H22 |
111.6 |
109.5 |
C2 |
C5 |
C6 |
108.4 |
120.0 |
C2 |
C5 |
C10 |
133.0 |
120.0 |
H21 |
C2 |
H22 |
98.8 |
109.5 |
N1 |
C1 |
B |
110.6 |
109.5 |
N1 |
C1 |
H1 |
109.1 |
109.4 |
C1 |
N1 |
C3 |
117.7 |
120.1 |
C1 |
N1 |
HN1 |
125.3 |
120.0 |
B |
C1 |
H1 |
107.3 |
109.5 |
C1 |
B |
OB1 |
112.8 |
120.0 |
C1 |
B |
OB2 |
97.5 |
120.0 |
C3 |
N1 |
HN1 |
117.0 |
120.0 |
N1 |
C3 |
C4 |
117.3 |
120.1 |
N1 |
C3 |
O2 |
122.1 |
120.0 |
C4 |
C3 |
O2 |
120.6 |
120.0 |
C3 |
C4 |
H41 |
117.3 |
109.5 |
C3 |
C4 |
H42 |
109.4 |
109.4 |
C3 |
C4 |
H43 |
109.4 |
109.5 |
H41 |
C4 |
H42 |
109.4 |
109.4 |
H41 |
C4 |
H43 |
109.4 |
109.5 |
H42 |
C4 |
H43 |
100.7 |
109.5 |
O3 |
C11 |
O4 |
122.0 |
120.0 |
O3 |
C11 |
C9 |
116.7 |
120.0 |
C11 |
O3 |
HO3 |
122.0 |
120.0 |
O4 |
C11 |
C9 |
118.6 |
120.0 |
C11 |
C9 |
C10 |
112.1 |
120.2 |
C11 |
C9 |
C8 |
127.9 |
120.2 |
OB1 |
B |
OB2 |
112.7 |
120.0 |
B |
OB1 |
HOB1 |
112.8 |
106.8 |
B |
OB2 |
HOB2 |
97.5 |
106.9 |
C5 |
C6 |
C7 |
120.2 |
120.4 |
C5 |
C6 |
H6 |
119.5 |
119.8 |
C6 |
C5 |
C10 |
118.5 |
120.1 |
C7 |
C6 |
H6 |
120.4 |
119.8 |
C6 |
C7 |
C8 |
120.0 |
120.3 |
C6 |
C7 |
H7 |
119.8 |
119.8 |
C5 |
C10 |
C9 |
122.3 |
119.7 |
C5 |
C10 |
O5 |
115.7 |
120.1 |
C8 |
C7 |
H7 |
120.2 |
119.9 |
C7 |
C8 |
C9 |
118.9 |
119.9 |
C7 |
C8 |
H8 |
121.3 |
120.1 |
C9 |
C10 |
O5 |
121.9 |
120.2 |
C10 |
C9 |
C8 |
120.0 |
119.6 |
C10 |
O5 |
HO5 |
115.7 |
106.8 |
C9 |
C8 |
H8 |
119.8 |
120.0 |
Torsion Angles for BJH
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C5 |
C2 |
C1 |
H21 |
234.8 |
240.0 |
C5 |
C2 |
C1 |
H22 |
125.3 |
120.0 |
C1 |
C2 |
C5 |
C6 |
235.1 |
90.0 |
C1 |
C2 |
C5 |
C10 |
58.2 |
269.7 |
H21 |
C2 |
C1 |
H22 |
250.5 |
239.9 |
N1 |
C1 |
C2 |
B |
123.4 |
120.1 |
N1 |
C1 |
C2 |
H1 |
241.1 |
240.1 |
C2 |
C1 |
N1 |
C3 |
77.8 |
150.0 |
C2 |
C1 |
N1 |
HN1 |
257.8 |
329.9 |
B |
C1 |
C2 |
H1 |
117.6 |
120.1 |
C2 |
C1 |
B |
OB1 |
107.4 |
60.0 |
C2 |
C1 |
B |
OB2 |
226.0 |
240.0 |
C1 |
C2 |
C5 |
H21 |
125.2 |
120.0 |
C1 |
C2 |
C5 |
H22 |
234.7 |
240.0 |
C5 |
C2 |
C1 |
N1 |
53.1 |
180.1 |
C5 |
C2 |
C1 |
B |
289.7 |
60.0 |
C5 |
C2 |
C1 |
H1 |
172.0 |
300.0 |
H21 |
C2 |
C5 |
H22 |
109.5 |
120.0 |
C2 |
C5 |
C6 |
C7 |
181.7 |
179.9 |
C2 |
C5 |
C6 |
H6 |
1.7 |
360.0 |
C6 |
C5 |
C2 |
C10 |
176.9 |
180.3 |
C2 |
C5 |
C10 |
C9 |
178.1 |
179.8 |
C2 |
C5 |
C10 |
O5 |
356.1 |
0.3 |
C1 |
C2 |
H21 |
C5 |
235.0 |
240.1 |
C1 |
C2 |
H21 |
H22 |
117.5 |
120.1 |
H21 |
C2 |
C1 |
N1 |
178.4 |
300.0 |
H21 |
C2 |
C1 |
B |
54.9 |
180.0 |
H21 |
C2 |
C1 |
H1 |
297.3 |
59.9 |
C5 |
C2 |
H21 |
H22 |
242.5 |
240.0 |
H21 |
C2 |
C5 |
C6 |
109.9 |
330.1 |
H21 |
C2 |
C5 |
C10 |
293.0 |
149.8 |
C1 |
C2 |
H22 |
C5 |
125.0 |
119.9 |
C1 |
C2 |
H22 |
H21 |
242.5 |
239.9 |
H22 |
C2 |
C1 |
N1 |
287.9 |
60.1 |
H22 |
C2 |
C1 |
B |
164.4 |
300.0 |
H22 |
C2 |
C1 |
H1 |
46.8 |
180.0 |
C5 |
C2 |
H22 |
H21 |
117.5 |
120.0 |
H22 |
C2 |
C5 |
C6 |
0.4 |
210.0 |
H22 |
C2 |
C5 |
C10 |
183.5 |
29.7 |
N1 |
C1 |
C2 |
C5 |
53.1 |
180.1 |
N1 |
C1 |
C2 |
H21 |
178.4 |
300.0 |
N1 |
C1 |
C2 |
H22 |
287.9 |
60.1 |
C2 |
C1 |
N1 |
B |
235.8 |
240.0 |
C2 |
C1 |
N1 |
H1 |
118.0 |
119.9 |
B |
C1 |
N1 |
H1 |
242.3 |
240.0 |
N1 |
C1 |
B |
OB1 |
344.2 |
300.0 |
N1 |
C1 |
B |
OB2 |
102.7 |
119.9 |
C3 |
N1 |
C1 |
HN1 |
180.0 |
180.2 |
C1 |
N1 |
C3 |
C4 |
177.1 |
180.0 |
C1 |
N1 |
C3 |
O2 |
356.1 |
359.9 |
B |
C1 |
C2 |
C5 |
289.7 |
60.0 |
B |
C1 |
C2 |
H21 |
54.9 |
180.0 |
B |
C1 |
C2 |
H22 |
164.4 |
300.0 |
C2 |
C1 |
B |
N1 |
123.2 |
120.0 |
C2 |
C1 |
B |
H1 |
242.1 |
240.0 |
N1 |
C1 |
B |
H1 |
118.9 |
119.9 |
B |
C1 |
N1 |
C3 |
202.1 |
270.1 |
B |
C1 |
N1 |
HN1 |
22.1 |
89.9 |
OB1 |
B |
C1 |
OB2 |
241.5 |
180.1 |
C1 |
B |
OB1 |
HOB1 |
180.0 |
180.0 |
C1 |
B |
OB2 |
HOB2 |
180.0 |
0.1 |
H1 |
C1 |
C2 |
C5 |
172.0 |
300.0 |
H1 |
C1 |
C2 |
H21 |
297.3 |
59.9 |
H1 |
C1 |
C2 |
H22 |
46.8 |
180.0 |
C2 |
C1 |
H1 |
N1 |
240.4 |
240.1 |
C2 |
C1 |
H1 |
B |
120.6 |
120.0 |
N1 |
C1 |
H1 |
B |
240.2 |
240.0 |
H1 |
C1 |
N1 |
C3 |
319.8 |
30.1 |
H1 |
C1 |
N1 |
HN1 |
139.8 |
210.0 |
H1 |
C1 |
B |
OB1 |
225.3 |
180.0 |
H1 |
C1 |
B |
OB2 |
343.9 |
360.0 |
C3 |
N1 |
C1 |
B |
202.1 |
270.1 |
C3 |
N1 |
C1 |
H1 |
319.8 |
30.1 |
C1 |
N1 |
C3 |
HN1 |
180.0 |
179.8 |
C4 |
C3 |
N1 |
O2 |
180.9 |
180.1 |
N1 |
C3 |
C4 |
H41 |
180.0 |
180.0 |
N1 |
C3 |
C4 |
H42 |
305.3 |
299.9 |
N1 |
C3 |
C4 |
H43 |
54.7 |
59.9 |
HN1 |
N1 |
C1 |
B |
22.1 |
89.9 |
HN1 |
N1 |
C1 |
H1 |
139.8 |
210.0 |
C1 |
N1 |
HN1 |
C3 |
180.0 |
180.2 |
HN1 |
N1 |
C3 |
C4 |
357.0 |
0.1 |
HN1 |
N1 |
C3 |
O2 |
176.1 |
180.0 |
C4 |
C3 |
N1 |
HN1 |
357.0 |
0.1 |
N1 |
C3 |
C4 |
O2 |
179.1 |
179.9 |
H41 |
C4 |
C3 |
H42 |
234.7 |
240.1 |
H41 |
C4 |
C3 |
H43 |
125.3 |
120.1 |
H42 |
C4 |
C3 |
H43 |
250.6 |
240.0 |
O2 |
C3 |
N1 |
HN1 |
176.1 |
180.0 |
N1 |
C3 |
O2 |
C4 |
181.0 |
180.1 |
O2 |
C3 |
C4 |
H41 |
0.9 |
0.1 |
O2 |
C3 |
C4 |
H42 |
126.2 |
120.0 |
O2 |
C3 |
C4 |
H43 |
235.6 |
240.0 |
H41 |
C4 |
C3 |
O2 |
0.9 |
0.1 |
C3 |
C4 |
H41 |
H42 |
125.3 |
120.0 |
C3 |
C4 |
H41 |
H43 |
234.7 |
239.9 |
H42 |
C4 |
H41 |
H43 |
109.5 |
120.0 |
H42 |
C4 |
C3 |
O2 |
126.2 |
120.0 |
C3 |
C4 |
H42 |
H41 |
230.3 |
240.0 |
C3 |
C4 |
H42 |
H43 |
115.1 |
120.0 |
H41 |
C4 |
H42 |
H43 |
244.8 |
240.0 |
H43 |
C4 |
C3 |
O2 |
235.6 |
240.0 |
C3 |
C4 |
H43 |
H41 |
129.7 |
120.1 |
C3 |
C4 |
H43 |
H42 |
244.9 |
240.0 |
H41 |
C4 |
H43 |
H42 |
115.2 |
119.9 |
O4 |
C11 |
O3 |
C9 |
199.0 |
179.9 |
O3 |
C11 |
C9 |
C10 |
49.1 |
180.3 |
O3 |
C11 |
C9 |
C8 |
230.9 |
359.9 |
O3 |
C11 |
O4 |
C9 |
160.6 |
180.1 |
O4 |
C11 |
O3 |
HO3 |
180.0 |
359.9 |
O4 |
C11 |
C9 |
C10 |
210.7 |
0.4 |
O4 |
C11 |
C9 |
C8 |
32.6 |
180.0 |
O3 |
C11 |
C9 |
O4 |
198.4 |
179.9 |
C9 |
C11 |
O3 |
HO3 |
341.0 |
180.0 |
C5 |
C10 |
C9 |
C11 |
179.9 |
180.2 |
C7 |
C8 |
C9 |
C11 |
179.7 |
180.1 |
C11 |
C9 |
C10 |
O5 |
2.0 |
359.7 |
C10 |
C9 |
C11 |
C8 |
178.2 |
180.4 |
C11 |
C9 |
C8 |
H8 |
359.7 |
0.2 |
HO3 |
O3 |
C11 |
O4 |
180.0 |
359.9 |
HO3 |
O3 |
C11 |
C9 |
341.0 |
180.0 |
OB1 |
B |
C1 |
H1 |
225.3 |
180.0 |
C1 |
B |
OB1 |
OB2 |
109.2 |
179.9 |
OB1 |
B |
OB2 |
HOB2 |
298.6 |
180.0 |
OB2 |
B |
C1 |
H1 |
343.9 |
360.0 |
C1 |
B |
OB2 |
OB1 |
241.4 |
180.1 |
OB2 |
B |
OB1 |
HOB1 |
70.8 |
0.1 |
HOB1 |
OB1 |
B |
OB2 |
70.8 |
0.1 |
C6 |
C5 |
C2 |
H21 |
109.9 |
330.1 |
C6 |
C5 |
C2 |
H22 |
0.4 |
210.0 |
C2 |
C5 |
C6 |
C10 |
182.6 |
179.7 |
C7 |
C6 |
C5 |
H6 |
180.0 |
179.9 |
C5 |
C6 |
C7 |
C8 |
0.8 |
0.1 |
C5 |
C6 |
C7 |
H7 |
180.8 |
180.0 |
C6 |
C5 |
C10 |
C9 |
1.4 |
359.5 |
C6 |
C5 |
C10 |
O5 |
179.4 |
180.0 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
C10 |
359.1 |
0.2 |
C8 |
C7 |
C6 |
H7 |
180.0 |
180.1 |
C6 |
C7 |
C8 |
C9 |
358.8 |
360.0 |
C6 |
C7 |
C8 |
H8 |
178.8 |
179.9 |
C5 |
C6 |
H6 |
C7 |
180.0 |
179.9 |
H6 |
C6 |
C5 |
C10 |
179.1 |
180.3 |
H6 |
C6 |
C7 |
C8 |
180.8 |
180.0 |
H6 |
C6 |
C7 |
H7 |
0.9 |
359.9 |
C10 |
C5 |
C2 |
H21 |
293.0 |
149.8 |
C10 |
C5 |
C2 |
H22 |
183.5 |
29.7 |
C2 |
C5 |
C10 |
C6 |
176.7 |
180.3 |
C11 |
C9 |
C10 |
C5 |
179.9 |
180.2 |
C10 |
C5 |
C6 |
C7 |
359.1 |
0.2 |
C10 |
C5 |
C6 |
H6 |
179.1 |
180.3 |
C9 |
C10 |
C5 |
O5 |
182.0 |
179.5 |
C5 |
C10 |
C9 |
C8 |
358.2 |
0.6 |
C5 |
C10 |
O5 |
HO5 |
180.0 |
269.5 |
C11 |
C9 |
C8 |
C7 |
179.7 |
180.1 |
C8 |
C7 |
C6 |
H6 |
180.8 |
180.0 |
C6 |
C7 |
C8 |
H7 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
C7 |
1.7 |
359.7 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.1 |
H7 |
C7 |
C6 |
H6 |
0.9 |
359.9 |
C6 |
C7 |
H7 |
C8 |
180.0 |
180.1 |
H7 |
C7 |
C8 |
C9 |
178.8 |
180.0 |
H7 |
C7 |
C8 |
H8 |
358.8 |
360.0 |
C11 |
C9 |
C10 |
C8 |
181.7 |
179.6 |
C5 |
C10 |
C9 |
O5 |
177.9 |
180.5 |
C7 |
C8 |
C9 |
C10 |
1.7 |
359.7 |
C9 |
C10 |
O5 |
HO5 |
358.0 |
90.0 |
C10 |
C9 |
C8 |
H8 |
181.7 |
179.8 |
C5 |
C10 |
O5 |
C9 |
182.0 |
179.5 |
O5 |
C10 |
C9 |
C8 |
180.3 |
180.1 |
C11 |
C9 |
C8 |
C10 |
178.0 |
180.4 |
C9 |
C8 |
C7 |
H7 |
178.8 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
179.9 |
C8 |
C9 |
C10 |
O5 |
180.3 |
180.1 |
H8 |
C8 |
C7 |
H7 |
358.8 |
360.0 |
C7 |
C8 |
H8 |
C9 |
180.0 |
180.1 |