PDB Chemical Component BIO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BIO

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.357	1.311
N1	C8A	1.357	1.346
N2	C2	1.412	1.370
N2	HN21	1.021	0.971
N2	HN22	1.020	0.969
C2	N3	1.351	1.362
N3	C4	1.354	1.353
N3	H3	1.021	0.970
C4	O4	1.403	1.217
C4	C4A	1.406	1.473
C4A	C8A	1.409	1.414
C4A	N5	1.365	1.325
C8A	N8	1.417	1.333
N8	C7	1.485	1.318
C7	C6	1.514	1.391
C7	H7	1.103	1.080
C6	N5	1.311	1.317
C6	C9	1.527	1.507
C9	O9	1.456	1.429
C9	C10	1.574	1.529
C9	H9	1.114	1.090
O9	HO9	0.950	0.967
C10	O10	1.438	1.428
C10	C11	1.550	1.530
C10	H10	1.114	1.090
O10	HO1	0.949	0.968
C11	H111	1.114	1.090
C11	H112	1.115	1.088
C11	H113	1.116	1.090

Bond Angles for BIO

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C8A	120.8	121.8
N1	C2	N2	120.3	118.4
N1	C2	N3	120.2	123.1
N1	C8A	C4A	119.9	119.1
N1	C8A	N8	121.0	121.5
C2	N2	HN21	120.3	120.0
C2	N2	HN22	108.4	120.1
N2	C2	N3	119.5	118.5
HN21	N2	HN22	108.3	119.9
C2	N3	C4	121.7	120.4
C2	N3	H3	119.1	119.8
C4	N3	H3	119.3	119.8
N3	C4	O4	119.9	121.3
N3	C4	C4A	119.4	117.6
O4	C4	C4A	120.7	121.2
C4	C4A	C8A	117.9	118.0
C4	C4A	N5	120.8	121.8
C8A	C4A	N5	121.3	120.2
C4A	C8A	N8	119.1	119.4
C4A	N5	C6	122.6	119.7
C8A	N8	C7	118.7	119.6
N8	C7	C6	112.8	120.7
N8	C7	H7	122.8	119.6
C6	C7	H7	124.4	119.7
C7	C6	N5	121.4	120.5
C7	C6	C9	119.2	119.7
N5	C6	C9	119.4	119.8
C6	C9	O9	110.8	109.5
C6	C9	C10	111.9	109.5
C6	C9	H9	107.6	109.5
O9	C9	C10	111.7	109.5
O9	C9	H9	107.9	109.5
C9	O9	HO9	110.8	106.8
C10	C9	H9	106.7	109.5
C9	C10	O10	109.9	109.5
C9	C10	C11	112.0	109.5
C9	C10	H10	107.0	109.4
O10	C10	C11	108.0	109.5
O10	C10	H10	111.0	109.4
C10	O10	HO1	109.9	106.8
C11	C10	H10	108.9	109.5
C10	C11	H111	112.0	109.5
C10	C11	H112	111.3	109.5
C10	C11	H113	111.3	109.5
H111	C11	H112	111.3	109.5
H111	C11	H113	111.3	109.5
H112	C11	H113	99.0	109.5

Torsion Angles for BIO

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C8A	C4A	0.1	0.0
C2	N1	C8A	N8	180.0	180.0
N1	C2	N2	HN21	180.0	360.0
N1	C2	N2	HN22	54.8	180.1
N2	C2	N1	N3	180.3	180.0
N1	C2	N3	C4	0.8	0.1
N1	C2	N3	H3	180.8	180.0
C8A	N1	C2	N2	179.6	180.0
C8A	N1	C2	N3	359.2	360.0
C4	C4A	C8A	N1	0.5	360.0
N1	C8A	C4A	N5	180.5	179.7
C4A	C8A	N1	N8	180.1	180.0
N1	C8A	N8	C7	196.1	180.0
N2	C2	N1	C8A	179.6	180.0
N1	C2	N2	N3	179.7	180.0
HN21	N2	C2	HN22	125.2	179.9
N2	C2	N3	C4	180.4	180.1
N2	C2	N3	H3	0.4	0.0
C2	N2	HN21	HN22	234.7	180.1
HN21	N2	C2	N3	0.4	180.0
C2	N2	HN22	HN21	132.0	179.9
HN22	N2	C2	N3	235.1	0.1
N3	C2	N1	C8A	359.2	360.0
N1	C2	N3	N2	180.3	180.0
N3	C2	N2	HN21	0.4	180.0
N3	C2	N2	HN22	235.1	0.1
C4	N3	C2	H3	180.0	180.1
C2	N3	C4	O4	179.9	180.0
C2	N3	C4	C4A	359.9	359.9
C2	N3	C4	H3	180.0	179.9
O4	C4	N3	C4A	180.0	180.1
N3	C4	C4A	C8A	359.5	0.1
N3	C4	C4A	N5	179.5	180.3
C2	N3	H3	C4	180.0	180.1
H3	N3	C4	O4	360.0	0.0
H3	N3	C4	C4A	179.9	180.0
O4	C4	N3	H3	360.0	0.0
N3	C4	O4	C4A	180.0	179.9
O4	C4	C4A	C8A	179.4	180.0
O4	C4	C4A	N5	359.4	0.3
N1	C8A	C4A	C4	0.5	360.0
C4A	C4	N3	H3	179.9	180.0
N3	C4	C4A	O4	180.0	180.1
C8A	C4A	C4	N5	180.0	179.7
C4	C4A	C8A	N8	180.7	180.0
C4	C4A	N5	C6	171.3	180.3
N1	C8A	C4A	N8	179.9	180.0
C4	C4A	C8A	N5	180.0	180.3
C8A	C4A	N5	C6	351.3	0.6
C4A	C8A	N8	C7	16.0	0.0
C4	C4A	N5	C8A	180.0	179.7
N5	C4A	C8A	N8	0.7	359.7
C7	C6	N5	C4A	359.3	359.5
C4A	N5	C6	C9	179.7	179.7
N1	C8A	N8	C4A	180.1	180.0
N8	C8A	C4A	N5	0.7	359.7
C8A	N8	C7	C6	336.7	0.0
C8A	N8	C7	H7	156.6	180.0
C6	C7	N8	H7	180.1	180.0
N8	C7	C6	N5	16.3	0.2
N8	C7	C6	C9	195.8	180.0
C4A	N5	C6	C7	359.3	359.5
N8	C7	C6	H7	179.9	180.0
N5	C6	C7	C9	180.5	180.2
C7	C6	C9	O9	198.7	240.0
C7	C6	C9	C10	73.4	120.0
C7	C6	C9	H9	316.4	360.0
N8	C7	H7	C6	180.1	180.0
H7	C7	C6	N5	196.4	180.2
H7	C7	C6	C9	15.9	360.0
N5	C6	C7	H7	196.4	180.2
C7	C6	N5	C9	179.5	179.8
N5	C6	C9	O9	18.2	59.7
N5	C6	C9	C10	252.9	299.7
N5	C6	C9	H9	136.0	179.7
C9	C6	C7	H7	15.9	360.0
C7	C6	C9	N5	180.5	180.2
O9	C9	C6	C10	125.3	120.0
O9	C9	C6	H9	242.3	240.0
C6	C9	O9	HO9	180.0	300.0
C10	C9	C6	H9	117.0	120.0
C6	C9	C10	O10	179.6	300.0
C6	C9	C10	C11	59.5	180.0
C6	C9	C10	H10	300.3	59.9
C6	C9	O9	C10	234.5	240.0
C6	C9	O9	H9	117.6	120.0
C10	C9	O9	H9	243.0	240.0
O9	C9	C10	O10	54.8	180.0
O9	C9	C10	C11	294.7	60.0
O9	C9	C10	H10	175.4	299.9
C6	C9	C10	O9	124.8	120.0
C6	C9	C10	H9	242.5	240.0
O9	C9	C10	H9	117.7	120.0
C10	C9	O9	HO9	305.5	60.1
O10	C10	C9	C11	120.1	120.1
O10	C10	C9	H10	239.4	240.1
C9	C10	O10	HO1	180.0	300.0
C11	C10	C9	H10	119.3	120.0
C9	C10	C11	H111	180.0	180.0
C9	C10	C11	H112	305.3	300.0
C9	C10	C11	H113	54.7	60.0
C6	C9	H9	O9	240.4	240.0
C6	C9	H9	C10	120.3	120.0
O9	C9	H9	C10	239.9	240.0
H9	C9	O9	HO9	62.4	180.0
H9	C9	C10	O10	297.1	60.0
H9	C9	C10	C11	177.0	300.0
H9	C9	C10	H10	57.8	180.0
HO9	O9	C9	C10	305.5	60.1
HO9	O9	C9	H9	62.4	180.0
O10	C10	C9	H9	297.1	60.0
C9	C10	O10	C11	237.6	240.0
C9	C10	O10	H10	118.2	119.9
C11	C10	O10	H10	240.6	240.0
O10	C10	C11	H111	58.9	60.0
O10	C10	C11	H112	184.2	180.0
O10	C10	C11	H113	293.6	300.0
C11	C10	C9	H9	177.0	300.0
C9	C10	C11	O10	121.1	120.0
C9	C10	C11	H10	241.8	240.0
O10	C10	C11	H10	120.7	120.0
C11	C10	O10	HO1	302.4	60.0
H111	C11	C10	H112	234.7	240.0
H111	C11	C10	H113	125.3	120.0
H112	C11	C10	H113	250.6	240.0
H10	C10	C9	H9	57.8	180.0
C9	C10	H10	O10	240.1	240.1
C9	C10	H10	C11	121.2	120.0
O10	C10	H10	C11	241.1	240.0
H10	C10	O10	HO1	61.8	180.0
H10	C10	C11	H111	298.2	300.0
H10	C10	C11	H112	63.5	60.0
H10	C10	C11	H113	172.9	180.0
HO1	O10	C10	C11	302.4	60.0
HO1	O10	C10	H10	61.8	180.0
H111	C11	C10	H10	298.2	300.0
C10	C11	H111	H112	125.3	120.0
C10	C11	H111	H113	234.7	240.0
H112	C11	H111	H113	109.4	120.0
H112	C11	C10	H10	63.5	60.0
C10	C11	H112	H111	234.3	240.0
C10	C11	H112	H113	117.1	120.0
H111	C11	H112	H113	242.8	240.0
H113	C11	C10	H10	172.9	180.0
C10	C11	H113	H111	125.7	120.0
C10	C11	H113	H112	242.8	240.0
H111	C11	H113	H112	117.2	120.0