PDB Chemical Component BIF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BIF
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.469 |
1.441 |
N |
H |
1.021 |
1.005 |
N |
H2 |
1.019 |
1.007 |
CA |
C |
1.526 |
1.521 |
CA |
CB |
1.525 |
1.534 |
CA |
HA |
1.116 |
1.097 |
C |
OXT |
1.225 |
1.355 |
C |
O |
|
1.227 |
OXT |
HXT |
0.950 |
0.980 |
CB |
CG |
1.530 |
1.510 |
CB |
HB2 |
1.114 |
1.097 |
CB |
HB3 |
1.115 |
1.099 |
CG |
CD2 |
1.406 |
1.386 |
CG |
CD1 |
1.415 |
1.386 |
CD2 |
CE2 |
1.404 |
1.395 |
CD2 |
HD2 |
1.102 |
1.087 |
CE2 |
CZ |
1.438 |
1.394 |
CE2 |
HE2 |
1.103 |
1.087 |
CZ |
CE1 |
1.456 |
1.395 |
CZ |
C12 |
1.412 |
1.448 |
CE1 |
CD1 |
1.416 |
1.395 |
CE1 |
HE1 |
1.103 |
1.087 |
CD1 |
HD1 |
1.103 |
1.087 |
C8 |
C9 |
1.408 |
1.396 |
C8 |
C13 |
1.408 |
1.395 |
C8 |
H8 |
1.102 |
1.086 |
C9 |
C10 |
1.412 |
1.395 |
C9 |
H9 |
1.102 |
1.086 |
C10 |
C11 |
1.412 |
1.395 |
C10 |
H10 |
1.103 |
1.085 |
C11 |
C12 |
1.438 |
1.394 |
C11 |
H11 |
1.103 |
1.087 |
C12 |
C13 |
1.451 |
1.395 |
C13 |
H13 |
1.102 |
1.087 |
Bond Angles for BIF
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
109.8 |
119.1 |
CA |
N |
H2 |
112.1 |
118.9 |
N |
CA |
C |
109.8 |
111.2 |
N |
CA |
CB |
108.7 |
111.2 |
N |
CA |
HA |
109.8 |
106.2 |
H |
N |
H2 |
112.1 |
120.6 |
C |
CA |
CB |
109.5 |
110.0 |
C |
CA |
HA |
109.0 |
106.9 |
CA |
C |
OXT |
121.2 |
114.9 |
CA |
C |
O |
|
123.0 |
CB |
CA |
HA |
110.1 |
111.3 |
CA |
CB |
CG |
119.5 |
113.0 |
CA |
CB |
HB2 |
108.6 |
110.4 |
CA |
CB |
HB3 |
108.6 |
110.1 |
OXT |
C |
O |
|
122.1 |
C |
OXT |
HXT |
121.2 |
114.9 |
CG |
CB |
HB2 |
108.6 |
108.1 |
CG |
CB |
HB3 |
108.6 |
109.7 |
CB |
CG |
CD2 |
118.5 |
119.4 |
CB |
CG |
CD1 |
121.5 |
119.3 |
HB2 |
CB |
HB3 |
101.4 |
105.2 |
CD2 |
CG |
CD1 |
120.0 |
121.3 |
CG |
CD2 |
CE2 |
120.9 |
119.4 |
CG |
CD2 |
HD2 |
119.7 |
121.1 |
CG |
CD1 |
CE1 |
119.6 |
119.3 |
CG |
CD1 |
HD1 |
120.2 |
121.2 |
CE2 |
CD2 |
HD2 |
119.5 |
119.5 |
CD2 |
CE2 |
CZ |
121.7 |
120.0 |
CD2 |
CE2 |
HE2 |
118.0 |
119.1 |
CZ |
CE2 |
HE2 |
120.4 |
120.9 |
CE2 |
CZ |
CE1 |
116.1 |
120.0 |
CE2 |
CZ |
C12 |
121.4 |
120.0 |
CE1 |
CZ |
C12 |
122.5 |
120.0 |
CZ |
CE1 |
CD1 |
121.7 |
120.0 |
CZ |
CE1 |
HE1 |
120.6 |
120.9 |
CZ |
C12 |
C11 |
123.0 |
120.0 |
CZ |
C12 |
C13 |
120.7 |
120.0 |
CD1 |
CE1 |
HE1 |
117.8 |
119.1 |
CE1 |
CD1 |
HD1 |
120.2 |
119.5 |
C9 |
C8 |
C13 |
119.6 |
120.0 |
C9 |
C8 |
H8 |
120.2 |
120.0 |
C8 |
C9 |
C10 |
120.5 |
120.0 |
C8 |
C9 |
H9 |
119.6 |
120.0 |
C13 |
C8 |
H8 |
120.2 |
120.0 |
C8 |
C13 |
C12 |
122.0 |
120.0 |
C8 |
C13 |
H13 |
117.5 |
119.2 |
C10 |
C9 |
H9 |
119.9 |
120.0 |
C9 |
C10 |
C11 |
120.1 |
120.0 |
C9 |
C10 |
H10 |
120.0 |
120.0 |
C11 |
C10 |
H10 |
119.9 |
120.0 |
C10 |
C11 |
C12 |
121.5 |
120.0 |
C10 |
C11 |
H11 |
118.3 |
119.2 |
C12 |
C11 |
H11 |
120.2 |
120.8 |
C11 |
C12 |
C13 |
116.3 |
120.0 |
C12 |
C13 |
H13 |
120.6 |
120.8 |
Torsion Angles for BIF
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
125.3 |
166.6 |
C |
CA |
N |
CB |
119.8 |
122.9 |
C |
CA |
N |
HA |
240.2 |
244.1 |
N |
CA |
C |
OXT |
350.4 |
145.1 |
N |
CA |
C |
O |
|
325.4 |
CB |
CA |
N |
HA |
120.4 |
121.2 |
N |
CA |
CB |
CG |
285.7 |
201.8 |
N |
CA |
CB |
HB2 |
51.0 |
323.0 |
N |
CA |
CB |
HB3 |
160.5 |
78.8 |
CA |
N |
H |
H2 |
234.7 |
193.6 |
H |
N |
CA |
C |
180.0 |
267.1 |
H |
N |
CA |
CB |
60.3 |
144.2 |
H |
N |
CA |
HA |
299.8 |
23.0 |
CA |
N |
H2 |
H |
124.0 |
166.4 |
H2 |
N |
CA |
C |
54.7 |
100.5 |
H2 |
N |
CA |
CB |
295.0 |
337.6 |
H2 |
N |
CA |
HA |
174.6 |
216.4 |
C |
CA |
N |
H |
180.0 |
267.1 |
C |
CA |
N |
H2 |
54.7 |
100.5 |
N |
CA |
C |
CB |
240.7 |
236.4 |
N |
CA |
C |
HA |
120.3 |
115.4 |
CB |
CA |
C |
HA |
239.6 |
239.0 |
C |
CA |
CB |
CG |
165.7 |
78.3 |
C |
CA |
CB |
HB2 |
291.0 |
199.4 |
C |
CA |
CB |
HB3 |
40.5 |
315.2 |
OXT |
C |
CA |
O |
|
179.6 |
CA |
C |
OXT |
HXT |
179.9 |
180.4 |
CB |
CA |
N |
H |
60.3 |
144.2 |
CB |
CA |
N |
H2 |
295.0 |
337.6 |
N |
CA |
CB |
C |
120.0 |
123.6 |
N |
CA |
CB |
HA |
239.8 |
241.8 |
C |
CA |
CB |
HA |
119.8 |
118.3 |
CB |
CA |
C |
OXT |
109.7 |
268.6 |
CB |
CA |
C |
O |
|
89.0 |
CG |
CB |
CA |
HB2 |
234.7 |
238.8 |
CG |
CB |
CA |
HB3 |
125.2 |
123.0 |
CA |
CB |
CG |
CD2 |
133.1 |
270.0 |
CA |
CB |
CG |
CD1 |
312.0 |
90.1 |
HB2 |
CB |
CA |
HB3 |
250.5 |
244.2 |
HA |
CA |
N |
H |
299.8 |
23.0 |
HA |
CA |
N |
H2 |
174.6 |
216.4 |
N |
CA |
HA |
C |
239.7 |
241.3 |
N |
CA |
HA |
CB |
119.6 |
121.1 |
C |
CA |
HA |
CB |
239.9 |
239.9 |
HA |
CA |
C |
OXT |
230.2 |
29.6 |
HA |
CA |
C |
O |
|
210.0 |
HA |
CA |
CB |
CG |
46.0 |
320.0 |
HA |
CA |
CB |
HB2 |
171.2 |
81.2 |
HA |
CA |
CB |
HB3 |
280.7 |
197.0 |
OXT |
C |
CA |
CB |
109.7 |
268.6 |
OXT |
C |
CA |
HA |
230.2 |
29.6 |
CA |
C |
OXT |
O |
|
180.3 |
O |
C |
CA |
CB |
|
89.0 |
O |
C |
CA |
HA |
|
210.0 |
CA |
C |
O |
OXT |
|
179.6 |
O |
C |
OXT |
HXT |
|
0.0 |
HXT |
OXT |
C |
O |
|
0.0 |
CG |
CB |
CA |
HA |
46.0 |
320.0 |
CA |
CB |
CG |
HB2 |
125.3 |
122.5 |
CA |
CB |
CG |
HB3 |
234.7 |
236.7 |
HB2 |
CB |
CG |
HB3 |
109.4 |
114.2 |
CD2 |
CG |
CB |
CD1 |
181.1 |
180.0 |
CB |
CG |
CD2 |
CE2 |
178.3 |
180.0 |
CB |
CG |
CD2 |
HD2 |
358.3 |
359.9 |
CB |
CG |
CD1 |
CE1 |
181.7 |
180.0 |
CB |
CG |
CD1 |
HD1 |
1.7 |
359.9 |
HB2 |
CB |
CA |
HA |
171.2 |
81.2 |
CA |
CB |
HB2 |
CG |
228.6 |
236.0 |
CA |
CB |
HB2 |
HB3 |
114.3 |
118.8 |
CG |
CB |
HB2 |
HB3 |
245.8 |
242.9 |
HB2 |
CB |
CG |
CD2 |
7.8 |
147.5 |
HB2 |
CB |
CG |
CD1 |
186.7 |
327.6 |
HB3 |
CB |
CA |
HA |
280.7 |
197.0 |
CA |
CB |
HB3 |
CG |
131.4 |
124.9 |
CA |
CB |
HB3 |
HB2 |
245.7 |
241.0 |
CG |
CB |
HB3 |
HB2 |
114.2 |
116.0 |
HB3 |
CB |
CG |
CD2 |
258.4 |
33.3 |
HB3 |
CB |
CG |
CD1 |
77.3 |
213.3 |
CD2 |
CG |
CB |
HB2 |
7.8 |
147.5 |
CD2 |
CG |
CB |
HB3 |
258.4 |
33.3 |
CB |
CG |
CD2 |
CD1 |
178.9 |
180.0 |
CD2 |
CG |
CD1 |
CE1 |
0.6 |
0.1 |
CD2 |
CG |
CD1 |
HD1 |
180.6 |
179.9 |
CE2 |
CD2 |
CG |
HD2 |
180.0 |
180.1 |
CG |
CD2 |
CE2 |
CZ |
0.1 |
360.0 |
CG |
CD2 |
CE2 |
HE2 |
180.1 |
180.1 |
CD1 |
CG |
CB |
HB2 |
186.7 |
327.6 |
CD1 |
CG |
CB |
HB3 |
77.3 |
213.3 |
CB |
CG |
CD1 |
CD2 |
181.2 |
180.0 |
CD1 |
CG |
CD2 |
CE2 |
359.4 |
359.9 |
CD1 |
CG |
CD2 |
HD2 |
179.5 |
179.9 |
CZ |
CE1 |
CD1 |
CG |
359.8 |
0.0 |
CG |
CD1 |
CE1 |
HE1 |
179.9 |
180.0 |
CE1 |
CD1 |
CG |
HD1 |
180.0 |
180.2 |
CE2 |
CD2 |
CG |
CD1 |
359.4 |
359.9 |
CG |
CD2 |
CE2 |
HD2 |
180.0 |
179.9 |
CZ |
CE2 |
CD2 |
HE2 |
180.0 |
179.9 |
CD2 |
CE2 |
CZ |
CE1 |
0.3 |
0.1 |
CD2 |
CE2 |
CZ |
C12 |
181.9 |
180.0 |
HD2 |
CD2 |
CG |
CD1 |
179.5 |
179.9 |
CG |
CD2 |
HD2 |
CE2 |
180.0 |
180.1 |
HD2 |
CD2 |
CE2 |
CZ |
180.1 |
180.1 |
HD2 |
CD2 |
CE2 |
HE2 |
0.0 |
0.2 |
CZ |
CE2 |
CD2 |
HD2 |
180.1 |
180.1 |
CD2 |
CE2 |
CZ |
HE2 |
180.0 |
180.1 |
CE1 |
CZ |
CE2 |
C12 |
178.4 |
180.1 |
CE2 |
CZ |
CE1 |
CD1 |
359.7 |
359.9 |
CE2 |
CZ |
CE1 |
HE1 |
179.7 |
179.9 |
CE2 |
CZ |
C12 |
C11 |
215.8 |
90.0 |
CE2 |
CZ |
C12 |
C13 |
37.1 |
270.0 |
HE2 |
CE2 |
CD2 |
HD2 |
0.0 |
0.2 |
CD2 |
CE2 |
HE2 |
CZ |
180.0 |
179.9 |
HE2 |
CE2 |
CZ |
CE1 |
180.4 |
179.9 |
HE2 |
CE2 |
CZ |
C12 |
2.0 |
359.9 |
CG |
CD1 |
CE1 |
CZ |
359.8 |
0.0 |
CE1 |
CZ |
CE2 |
HE2 |
180.4 |
179.9 |
CE2 |
CZ |
CE1 |
C12 |
181.6 |
179.9 |
CE1 |
CZ |
C12 |
C11 |
37.5 |
270.0 |
CE1 |
CZ |
C12 |
C13 |
218.8 |
90.0 |
CD1 |
CE1 |
CZ |
HE1 |
180.0 |
180.0 |
CZ |
CE1 |
CD1 |
HD1 |
179.8 |
180.1 |
C12 |
CZ |
CE2 |
HE2 |
2.0 |
359.9 |
CE2 |
CZ |
C12 |
CE1 |
178.3 |
180.1 |
C12 |
CZ |
CE1 |
CD1 |
178.1 |
180.0 |
C12 |
CZ |
CE1 |
HE1 |
358.1 |
360.0 |
C8 |
C13 |
C12 |
CZ |
179.0 |
180.0 |
C10 |
C11 |
C12 |
CZ |
181.0 |
180.0 |
CZ |
C12 |
C11 |
H11 |
1.0 |
360.0 |
C11 |
C12 |
CZ |
C13 |
178.7 |
180.0 |
CZ |
C12 |
C13 |
H13 |
358.9 |
0.0 |
CG |
CD1 |
CE1 |
HD1 |
180.0 |
179.9 |
CD1 |
CE1 |
CZ |
C12 |
178.1 |
180.0 |
CZ |
CE1 |
CD1 |
HE1 |
180.0 |
180.0 |
HE1 |
CE1 |
CZ |
C12 |
358.1 |
360.0 |
CZ |
CE1 |
HE1 |
CD1 |
180.0 |
180.0 |
HE1 |
CE1 |
CD1 |
HD1 |
359.9 |
0.2 |
CG |
CD1 |
HD1 |
CE1 |
180.0 |
180.2 |
HD1 |
CD1 |
CE1 |
HE1 |
359.9 |
0.2 |
C13 |
C8 |
C9 |
H8 |
180.0 |
180.1 |
C9 |
C8 |
C13 |
C12 |
359.9 |
360.0 |
C9 |
C8 |
C13 |
H13 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
C8 |
C9 |
C10 |
C11 |
359.9 |
0.0 |
C8 |
C9 |
C10 |
H10 |
179.9 |
180.0 |
CZ |
C12 |
C13 |
C8 |
179.0 |
180.0 |
C9 |
C8 |
C13 |
H8 |
180.0 |
179.9 |
C13 |
C8 |
C9 |
C10 |
0.0 |
0.0 |
C13 |
C8 |
C9 |
H9 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
C8 |
0.2 |
0.0 |
C12 |
C13 |
C8 |
H13 |
180.0 |
180.0 |
C9 |
C8 |
H8 |
C13 |
180.1 |
180.1 |
H8 |
C8 |
C9 |
C10 |
180.0 |
179.9 |
H8 |
C8 |
C9 |
H9 |
360.0 |
359.9 |
H8 |
C8 |
C13 |
C12 |
180.0 |
180.0 |
H8 |
C8 |
C13 |
H13 |
0.0 |
0.0 |
C10 |
C9 |
C8 |
C13 |
0.0 |
0.0 |
C10 |
C9 |
C8 |
H8 |
180.0 |
179.9 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
C11 |
C10 |
C9 |
H10 |
180.0 |
180.1 |
C9 |
C10 |
C11 |
C12 |
0.3 |
360.0 |
C9 |
C10 |
C11 |
H11 |
180.2 |
180.0 |
H9 |
C9 |
C8 |
C13 |
180.0 |
180.0 |
H9 |
C9 |
C8 |
H8 |
360.0 |
359.9 |
C8 |
C9 |
H9 |
C10 |
180.0 |
180.0 |
H9 |
C9 |
C10 |
C11 |
179.9 |
180.0 |
H9 |
C9 |
C10 |
H10 |
359.9 |
360.0 |
CZ |
C12 |
C11 |
C10 |
181.0 |
180.0 |
C11 |
C10 |
C9 |
H9 |
179.9 |
180.0 |
C9 |
C10 |
C11 |
H10 |
180.0 |
179.9 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
C13 |
359.7 |
0.0 |
H10 |
C10 |
C9 |
H9 |
359.9 |
360.0 |
C9 |
C10 |
H10 |
C11 |
180.0 |
180.1 |
H10 |
C10 |
C11 |
C12 |
180.2 |
180.0 |
H10 |
C10 |
C11 |
H11 |
0.2 |
0.1 |
CZ |
C12 |
C11 |
C13 |
181.3 |
180.0 |
C8 |
C13 |
C12 |
C11 |
0.2 |
0.0 |
C12 |
C11 |
C10 |
H10 |
180.2 |
180.0 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
H13 |
180.1 |
180.0 |
H11 |
C11 |
C10 |
H10 |
0.2 |
0.1 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
H11 |
C11 |
C12 |
C13 |
179.7 |
180.0 |
CZ |
C12 |
C13 |
C11 |
178.8 |
180.0 |
C12 |
C13 |
C8 |
H8 |
180.0 |
180.0 |
C8 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H11 |
179.7 |
180.0 |
H13 |
C13 |
C8 |
H8 |
0.0 |
0.0 |
C8 |
C13 |
H13 |
C12 |
180.0 |
180.0 |