PDB Chemical Component BIB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BIB
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O7 |
C5 |
1.245 |
1.220 |
| C5 |
O6 |
1.255 |
1.219 |
| C5 |
C3 |
1.523 |
1.507 |
| C3 |
C2 |
1.540 |
1.530 |
| C3 |
C4 |
1.536 |
1.530 |
| C3 |
H3 |
1.115 |
1.090 |
| C2 |
H21 |
1.115 |
1.090 |
| C2 |
H22 |
1.115 |
1.089 |
| C2 |
H23 |
1.116 |
1.090 |
| C4 |
N1 |
1.457 |
1.469 |
| C4 |
H41 |
1.115 |
1.090 |
| C4 |
H42 |
1.114 |
1.091 |
| N1 |
HN11 |
1.020 |
1.010 |
| N1 |
HN12 |
1.020 |
1.008 |
Bond Angles for BIB
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O7 |
C5 |
O6 |
120.7 |
120.0 |
| O7 |
C5 |
C3 |
116.7 |
120.0 |
| O6 |
C5 |
C3 |
122.6 |
120.0 |
| C5 |
C3 |
C2 |
113.9 |
109.5 |
| C5 |
C3 |
C4 |
111.4 |
109.5 |
| C5 |
C3 |
H3 |
105.7 |
109.5 |
| C2 |
C3 |
C4 |
111.7 |
109.5 |
| C2 |
C3 |
H3 |
105.3 |
109.4 |
| C3 |
C2 |
H21 |
114.0 |
109.4 |
| C3 |
C2 |
H22 |
110.6 |
109.5 |
| C3 |
C2 |
H23 |
110.6 |
109.4 |
| C4 |
C3 |
H3 |
108.2 |
109.5 |
| C3 |
C4 |
N1 |
107.2 |
109.5 |
| C3 |
C4 |
H41 |
113.0 |
109.5 |
| C3 |
C4 |
H42 |
113.0 |
109.4 |
| H21 |
C2 |
H22 |
110.5 |
109.5 |
| H21 |
C2 |
H23 |
110.6 |
109.5 |
| H22 |
C2 |
H23 |
99.7 |
109.5 |
| N1 |
C4 |
H41 |
113.1 |
109.5 |
| N1 |
C4 |
H42 |
113.1 |
109.5 |
| C4 |
N1 |
HN11 |
107.2 |
106.6 |
| C4 |
N1 |
HN12 |
113.0 |
106.7 |
| H41 |
C4 |
H42 |
97.4 |
109.5 |
| HN11 |
N1 |
HN12 |
113.1 |
106.7 |
Torsion Angles for BIB
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O6 |
C5 |
O7 |
C3 |
181.4 |
180.1 |
| O7 |
C5 |
C3 |
C2 |
112.3 |
320.1 |
| O7 |
C5 |
C3 |
C4 |
239.9 |
80.0 |
| O7 |
C5 |
C3 |
H3 |
357.2 |
200.1 |
| O7 |
C5 |
O6 |
C3 |
178.5 |
179.9 |
| O6 |
C5 |
C3 |
C2 |
290.9 |
140.0 |
| O6 |
C5 |
C3 |
C4 |
58.5 |
260.0 |
| O6 |
C5 |
C3 |
H3 |
175.8 |
20.0 |
| O7 |
C5 |
C3 |
O6 |
181.4 |
180.1 |
| C2 |
C3 |
C5 |
C4 |
232.5 |
240.0 |
| C2 |
C3 |
C5 |
H3 |
115.1 |
120.0 |
| C5 |
C3 |
C2 |
H21 |
180.0 |
60.0 |
| C5 |
C3 |
C2 |
H22 |
305.3 |
180.0 |
| C5 |
C3 |
C2 |
H23 |
54.7 |
300.0 |
| C4 |
C3 |
C5 |
H3 |
242.7 |
240.0 |
| C5 |
C3 |
C4 |
N1 |
122.6 |
175.0 |
| C5 |
C3 |
C4 |
H41 |
247.8 |
295.0 |
| C5 |
C3 |
C4 |
H42 |
357.3 |
55.0 |
| C5 |
C3 |
C2 |
C4 |
127.4 |
120.0 |
| C5 |
C3 |
C2 |
H3 |
244.6 |
240.0 |
| C4 |
C3 |
C2 |
H3 |
117.2 |
120.0 |
| C2 |
C3 |
C4 |
N1 |
251.3 |
295.0 |
| C2 |
C3 |
C4 |
H41 |
16.5 |
55.0 |
| C2 |
C3 |
C4 |
H42 |
126.0 |
175.0 |
| H21 |
C2 |
C3 |
H22 |
234.8 |
240.0 |
| H21 |
C2 |
C3 |
H23 |
125.3 |
120.0 |
| H22 |
C2 |
C3 |
H23 |
250.5 |
240.0 |
| C5 |
C3 |
C4 |
C2 |
231.3 |
240.0 |
| C5 |
C3 |
C4 |
H3 |
115.8 |
120.0 |
| C2 |
C3 |
C4 |
H3 |
244.5 |
240.0 |
| C4 |
C3 |
C2 |
H21 |
52.6 |
300.0 |
| C4 |
C3 |
C2 |
H22 |
177.9 |
60.0 |
| C4 |
C3 |
C2 |
H23 |
287.3 |
180.0 |
| N1 |
C4 |
C3 |
H41 |
234.7 |
239.9 |
| N1 |
C4 |
C3 |
H42 |
125.3 |
120.0 |
| C3 |
C4 |
N1 |
HN11 |
180.0 |
66.2 |
| C3 |
C4 |
N1 |
HN12 |
54.7 |
180.0 |
| H41 |
C4 |
C3 |
H42 |
250.6 |
240.0 |
| C5 |
C3 |
H3 |
C2 |
120.9 |
120.0 |
| C5 |
C3 |
H3 |
C4 |
240.5 |
240.0 |
| C2 |
C3 |
H3 |
C4 |
119.6 |
120.0 |
| H3 |
C3 |
C2 |
H21 |
295.4 |
180.0 |
| H3 |
C3 |
C2 |
H22 |
60.6 |
300.0 |
| H3 |
C3 |
C2 |
H23 |
170.1 |
60.0 |
| H3 |
C3 |
C4 |
N1 |
6.8 |
54.9 |
| H3 |
C3 |
C4 |
H41 |
132.0 |
175.0 |
| H3 |
C3 |
C4 |
H42 |
241.5 |
295.0 |
| H21 |
C2 |
C3 |
C4 |
52.6 |
300.0 |
| H21 |
C2 |
C3 |
H3 |
295.4 |
180.0 |
| C3 |
C2 |
H21 |
H22 |
125.3 |
120.0 |
| C3 |
C2 |
H21 |
H23 |
234.7 |
240.0 |
| H22 |
C2 |
H21 |
H23 |
109.4 |
120.1 |
| H22 |
C2 |
C3 |
C4 |
177.9 |
60.0 |
| H22 |
C2 |
C3 |
H3 |
60.6 |
300.0 |
| C3 |
C2 |
H22 |
H21 |
232.8 |
240.0 |
| C3 |
C2 |
H22 |
H23 |
116.4 |
120.0 |
| H21 |
C2 |
H22 |
H23 |
243.6 |
240.0 |
| H23 |
C2 |
C3 |
C4 |
287.3 |
180.0 |
| H23 |
C2 |
C3 |
H3 |
170.1 |
60.0 |
| C3 |
C2 |
H23 |
H21 |
127.2 |
120.0 |
| C3 |
C2 |
H23 |
H22 |
243.5 |
240.0 |
| H21 |
C2 |
H23 |
H22 |
116.3 |
120.0 |
| N1 |
C4 |
C3 |
H3 |
6.8 |
54.9 |
| C3 |
C4 |
N1 |
H41 |
125.2 |
120.0 |
| C3 |
C4 |
N1 |
H42 |
234.7 |
240.1 |
| H41 |
C4 |
N1 |
H42 |
109.5 |
120.0 |
| HN11 |
N1 |
C4 |
HN12 |
125.3 |
246.2 |
| H41 |
C4 |
C3 |
H3 |
132.0 |
175.0 |
| C3 |
C4 |
H41 |
N1 |
238.0 |
240.0 |
| C3 |
C4 |
H41 |
H42 |
118.9 |
119.9 |
| N1 |
C4 |
H41 |
H42 |
241.0 |
240.0 |
| H41 |
C4 |
N1 |
HN11 |
54.8 |
306.2 |
| H41 |
C4 |
N1 |
HN12 |
289.5 |
60.0 |
| H42 |
C4 |
C3 |
H3 |
241.5 |
295.0 |
| C3 |
C4 |
H42 |
N1 |
122.1 |
120.0 |
| C3 |
C4 |
H42 |
H41 |
241.1 |
240.0 |
| N1 |
C4 |
H42 |
H41 |
119.0 |
120.1 |
| H42 |
C4 |
N1 |
HN11 |
305.3 |
186.2 |
| H42 |
C4 |
N1 |
HN12 |
180.0 |
299.9 |
| HN11 |
N1 |
C4 |
H41 |
54.8 |
306.2 |
| HN11 |
N1 |
C4 |
H42 |
305.3 |
186.2 |
| C4 |
N1 |
HN11 |
HN12 |
234.7 |
113.7 |
| HN12 |
N1 |
C4 |
H41 |
289.5 |
60.0 |
| HN12 |
N1 |
C4 |
H42 |
180.0 |
299.9 |
| C4 |
N1 |
HN12 |
HN11 |
122.0 |
246.3 |