PDB Chemical Component BHD
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BHD
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.449 |
1.470 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.008 |
| CA |
CB |
1.578 |
1.530 |
| CA |
C |
1.559 |
1.506 |
| CA |
HA |
1.100 |
1.090 |
| CB |
OB |
1.174 |
1.429 |
| CB |
CG |
1.492 |
1.507 |
| CB |
HB |
1.100 |
1.090 |
| OB |
HOB |
0.950 |
0.967 |
| CG |
OD1 |
1.188 |
1.208 |
| CG |
OD2 |
1.327 |
1.342 |
| OD2 |
HD2 |
0.950 |
0.967 |
| C |
O |
1.218 |
1.209 |
| C |
OXT |
1.341 |
1.343 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for BHD
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
109.5 |
110.9 |
| CA |
N |
H2 |
109.5 |
111.0 |
| N |
CA |
CB |
102.1 |
109.4 |
| N |
CA |
C |
113.3 |
109.5 |
| N |
CA |
HA |
107.5 |
109.5 |
| H |
N |
H2 |
109.5 |
111.1 |
| CB |
CA |
C |
121.0 |
109.5 |
| CB |
CA |
HA |
106.0 |
109.4 |
| CA |
CB |
OB |
113.2 |
109.5 |
| CA |
CB |
CG |
111.2 |
109.5 |
| CA |
CB |
HB |
106.9 |
109.4 |
| C |
CA |
HA |
106.2 |
109.5 |
| CA |
C |
O |
120.3 |
120.0 |
| CA |
C |
OXT |
118.2 |
120.0 |
| OB |
CB |
CG |
104.5 |
109.5 |
| OB |
CB |
HB |
113.0 |
109.5 |
| CB |
OB |
HOB |
109.5 |
114.0 |
| CG |
CB |
HB |
107.9 |
109.5 |
| CB |
CG |
OD1 |
113.6 |
120.0 |
| CB |
CG |
OD2 |
119.2 |
120.0 |
| OD1 |
CG |
OD2 |
125.3 |
120.0 |
| CG |
OD2 |
HD2 |
109.5 |
117.0 |
| O |
C |
OXT |
121.5 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
Torsion Angles for BHD
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
240.0 |
236.0 |
| CB |
CA |
N |
C |
228.2 |
240.0 |
| CB |
CA |
N |
HA |
111.3 |
119.9 |
| N |
CA |
CB |
OB |
297.0 |
65.0 |
| N |
CA |
CB |
CG |
179.6 |
305.0 |
| N |
CA |
CB |
HB |
62.0 |
185.0 |
| C |
CA |
N |
HA |
243.1 |
239.9 |
| N |
CA |
C |
O |
310.7 |
340.1 |
| N |
CA |
C |
OXT |
130.8 |
160.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H |
N |
CA |
CB |
180.0 |
176.0 |
| H |
N |
CA |
C |
311.8 |
296.0 |
| H |
N |
CA |
HA |
68.7 |
56.1 |
| CA |
N |
H2 |
H |
239.9 |
236.1 |
| H2 |
N |
CA |
CB |
300.0 |
300.0 |
| H2 |
N |
CA |
C |
71.8 |
60.0 |
| H2 |
N |
CA |
HA |
188.7 |
180.1 |
| CB |
CA |
N |
H |
180.0 |
176.0 |
| CB |
CA |
N |
H2 |
300.0 |
300.0 |
| N |
CA |
CB |
C |
126.9 |
120.0 |
| N |
CA |
CB |
HA |
247.6 |
240.1 |
| C |
CA |
CB |
HA |
120.7 |
120.1 |
| CB |
CA |
C |
O |
72.5 |
100.0 |
| CB |
CA |
C |
OXT |
252.5 |
280.0 |
| OB |
CB |
CA |
CG |
117.3 |
120.0 |
| OB |
CB |
CA |
HB |
234.9 |
240.0 |
| CA |
CB |
OB |
HOB |
210.2 |
300.0 |
| CG |
CB |
CA |
HB |
117.6 |
120.0 |
| CA |
CB |
CG |
OD1 |
201.4 |
115.0 |
| CA |
CB |
CG |
OD2 |
6.5 |
295.0 |
| C |
CA |
N |
H |
311.8 |
296.0 |
| C |
CA |
N |
H2 |
71.8 |
60.0 |
| N |
CA |
C |
CB |
238.3 |
240.0 |
| N |
CA |
C |
HA |
117.7 |
120.0 |
| CB |
CA |
C |
HA |
239.4 |
240.0 |
| C |
CA |
CB |
OB |
170.0 |
305.0 |
| C |
CA |
CB |
CG |
52.7 |
185.0 |
| C |
CA |
CB |
HB |
295.1 |
65.0 |
| O |
C |
CA |
OXT |
180.0 |
180.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.1 |
| HA |
CA |
N |
H |
68.7 |
56.1 |
| HA |
CA |
N |
H2 |
188.7 |
180.1 |
| N |
CA |
HA |
CB |
108.6 |
119.9 |
| N |
CA |
HA |
C |
238.5 |
239.9 |
| CB |
CA |
HA |
C |
129.9 |
120.0 |
| HA |
CA |
CB |
OB |
49.3 |
184.9 |
| HA |
CA |
CB |
CG |
292.0 |
65.0 |
| HA |
CA |
CB |
HB |
174.4 |
304.9 |
| HA |
CA |
C |
O |
193.1 |
220.0 |
| HA |
CA |
C |
OXT |
13.1 |
40.0 |
| OB |
CB |
CA |
C |
170.0 |
305.0 |
| OB |
CB |
CA |
HA |
49.3 |
184.9 |
| CA |
CB |
OB |
CG |
238.8 |
240.0 |
| CA |
CB |
OB |
HB |
121.7 |
120.0 |
| CG |
CB |
OB |
HB |
242.9 |
240.0 |
| OB |
CB |
CG |
OD1 |
78.9 |
355.0 |
| OB |
CB |
CG |
OD2 |
244.0 |
175.0 |
| CG |
CB |
CA |
C |
52.7 |
185.0 |
| CG |
CB |
CA |
HA |
292.0 |
65.0 |
| CA |
CB |
CG |
OB |
122.5 |
120.0 |
| CA |
CB |
CG |
HB |
243.0 |
240.0 |
| OB |
CB |
CG |
HB |
120.5 |
120.0 |
| CG |
CB |
OB |
HOB |
331.4 |
60.0 |
| OD1 |
CG |
CB |
OD2 |
195.0 |
180.0 |
| CB |
CG |
OD2 |
HD2 |
196.8 |
180.1 |
| HB |
CB |
CA |
C |
295.1 |
65.0 |
| HB |
CB |
CA |
HA |
174.4 |
304.9 |
| CA |
CB |
HB |
OB |
234.8 |
240.0 |
| CA |
CB |
HB |
CG |
119.7 |
120.0 |
| OB |
CB |
HB |
CG |
244.9 |
240.0 |
| HB |
CB |
OB |
HOB |
88.4 |
180.1 |
| HB |
CB |
CG |
OD1 |
318.4 |
235.0 |
| HB |
CB |
CG |
OD2 |
123.5 |
55.0 |
| HOB |
OB |
CB |
CG |
331.4 |
60.0 |
| HOB |
OB |
CB |
HB |
88.4 |
180.1 |
| OD1 |
CG |
CB |
HB |
318.4 |
235.0 |
| CB |
CG |
OD1 |
OD2 |
164.0 |
180.0 |
| OD1 |
CG |
OD2 |
HD2 |
360.0 |
0.1 |
| OD2 |
CG |
CB |
HB |
123.5 |
55.0 |
| CB |
CG |
OD2 |
OD1 |
196.9 |
180.0 |
| O |
C |
CA |
HA |
193.1 |
220.0 |
| CA |
C |
O |
OXT |
180.0 |
180.0 |
| O |
C |
OXT |
HXT |
360.0 |
0.0 |
| OXT |
C |
CA |
HA |
13.1 |
40.0 |
| CA |
C |
OXT |
O |
180.0 |
180.0 |