PDB Chemical Component BGC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BGC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C3 |
1.534 |
1.531 |
C2 |
C1 |
1.528 |
1.531 |
C2 |
O2 |
1.403 |
1.429 |
C2 |
H2 |
1.100 |
1.090 |
C3 |
C4 |
1.547 |
1.532 |
C3 |
O3 |
1.427 |
1.429 |
C3 |
H3 |
1.100 |
1.090 |
C4 |
C5 |
1.543 |
1.531 |
C4 |
O4 |
1.416 |
1.429 |
C4 |
H4 |
1.100 |
1.090 |
C5 |
C6 |
1.530 |
1.530 |
C5 |
O5 |
1.432 |
1.428 |
C5 |
H5 |
1.100 |
1.091 |
C6 |
O6 |
1.406 |
1.429 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.100 |
1.090 |
C1 |
O1 |
1.412 |
1.428 |
C1 |
O5 |
1.416 |
1.430 |
C1 |
H1 |
1.100 |
1.090 |
O1 |
HO1 |
0.949 |
0.967 |
O2 |
HO2 |
0.950 |
0.967 |
O3 |
HO3 |
0.950 |
0.967 |
O4 |
HO4 |
0.950 |
0.967 |
O6 |
HO6 |
0.950 |
0.967 |
Bond Angles for BGC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C2 |
C1 |
107.7 |
109.2 |
C3 |
C2 |
O2 |
109.5 |
109.5 |
C3 |
C2 |
H2 |
109.4 |
109.6 |
C2 |
C3 |
C4 |
112.0 |
109.0 |
C2 |
C3 |
O3 |
113.2 |
109.6 |
C2 |
C3 |
H3 |
106.1 |
109.6 |
C1 |
C2 |
O2 |
109.3 |
109.5 |
C1 |
C2 |
H2 |
109.5 |
109.5 |
C2 |
C1 |
O1 |
110.3 |
109.5 |
C2 |
C1 |
O5 |
109.7 |
109.4 |
C2 |
C1 |
H1 |
108.1 |
109.5 |
O2 |
C2 |
H2 |
111.3 |
109.6 |
C2 |
O2 |
HO2 |
109.5 |
114.0 |
C4 |
C3 |
O3 |
111.7 |
109.5 |
C4 |
C3 |
H3 |
105.9 |
109.5 |
C3 |
C4 |
C5 |
112.8 |
109.2 |
C3 |
C4 |
O4 |
109.4 |
109.5 |
C3 |
C4 |
H4 |
107.4 |
109.5 |
O3 |
C3 |
H3 |
107.3 |
109.6 |
C3 |
O3 |
HO3 |
109.5 |
113.9 |
C5 |
C4 |
O4 |
110.5 |
109.5 |
C5 |
C4 |
H4 |
107.5 |
109.5 |
C4 |
C5 |
C6 |
110.2 |
109.5 |
C4 |
C5 |
O5 |
111.9 |
109.4 |
C4 |
C5 |
H5 |
107.4 |
109.4 |
O4 |
C4 |
H4 |
109.1 |
109.6 |
C4 |
O4 |
HO4 |
109.5 |
114.0 |
C6 |
C5 |
O5 |
110.8 |
109.5 |
C6 |
C5 |
H5 |
107.6 |
109.5 |
C5 |
C6 |
O6 |
110.9 |
109.4 |
C5 |
C6 |
H61 |
109.1 |
109.5 |
C5 |
C6 |
H62 |
109.1 |
109.4 |
O5 |
C5 |
H5 |
108.8 |
109.5 |
C5 |
O5 |
C1 |
112.5 |
114.1 |
O6 |
C6 |
H61 |
109.1 |
109.5 |
O6 |
C6 |
H62 |
109.1 |
109.5 |
C6 |
O6 |
HO6 |
109.5 |
114.0 |
H61 |
C6 |
H62 |
109.5 |
109.5 |
O1 |
C1 |
O5 |
109.3 |
109.5 |
O1 |
C1 |
H1 |
109.7 |
109.5 |
C1 |
O1 |
HO1 |
109.5 |
114.0 |
O5 |
C1 |
H1 |
109.6 |
109.5 |
Torsion Angles for BGC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
O2 |
118.8 |
119.8 |
C1 |
C2 |
C3 |
H2 |
241.1 |
240.0 |
C3 |
C2 |
C1 |
O1 |
183.7 |
177.6 |
C3 |
C2 |
C1 |
O5 |
63.2 |
57.7 |
C3 |
C2 |
C1 |
H1 |
303.7 |
297.7 |
O2 |
C2 |
C3 |
H2 |
122.3 |
120.2 |
C3 |
C2 |
O2 |
HO2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
O3 |
127.4 |
119.8 |
C4 |
C3 |
C2 |
H3 |
244.9 |
240.2 |
C2 |
C3 |
C4 |
C5 |
43.6 |
57.0 |
C2 |
C3 |
C4 |
O4 |
167.1 |
176.9 |
C2 |
C3 |
C4 |
H4 |
285.4 |
297.1 |
O3 |
C3 |
C2 |
H3 |
117.5 |
120.3 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
300.0 |
C3 |
C2 |
C1 |
O2 |
241.1 |
240.1 |
C3 |
C2 |
C1 |
H2 |
118.9 |
120.0 |
C1 |
C2 |
C3 |
C4 |
308.4 |
303.0 |
C1 |
C2 |
C3 |
O3 |
181.1 |
183.1 |
C1 |
C2 |
C3 |
H3 |
63.6 |
62.8 |
O2 |
C2 |
C1 |
H2 |
237.8 |
239.9 |
C1 |
C2 |
O2 |
HO2 |
62.2 |
60.4 |
C5 |
O5 |
C1 |
C2 |
292.3 |
298.8 |
O1 |
C1 |
C2 |
O5 |
120.5 |
120.0 |
O1 |
C1 |
C2 |
H1 |
240.0 |
239.9 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
180.0 |
O5 |
C1 |
C2 |
H1 |
119.5 |
120.0 |
C3 |
C2 |
O2 |
C1 |
117.8 |
119.6 |
C3 |
C2 |
O2 |
H2 |
238.9 |
239.8 |
O2 |
C2 |
C3 |
C4 |
189.6 |
183.1 |
O2 |
C2 |
C3 |
O3 |
62.3 |
63.3 |
O2 |
C2 |
C3 |
H3 |
304.8 |
303.0 |
C1 |
C2 |
O2 |
H2 |
121.1 |
120.1 |
O2 |
C2 |
C1 |
O1 |
302.6 |
297.5 |
O2 |
C2 |
C1 |
O5 |
182.1 |
177.5 |
O2 |
C2 |
C1 |
H1 |
62.6 |
57.5 |
C3 |
C2 |
H2 |
C1 |
242.2 |
240.3 |
C3 |
C2 |
H2 |
O2 |
121.2 |
120.2 |
H2 |
C2 |
C3 |
C4 |
67.4 |
62.9 |
H2 |
C2 |
C3 |
O3 |
300.0 |
303.1 |
H2 |
C2 |
C3 |
H3 |
182.5 |
182.8 |
C1 |
C2 |
H2 |
O2 |
239.0 |
239.9 |
H2 |
C2 |
C1 |
O1 |
64.8 |
57.6 |
H2 |
C2 |
C1 |
O5 |
304.3 |
297.7 |
H2 |
C2 |
C1 |
H1 |
184.8 |
177.7 |
H2 |
C2 |
O2 |
HO2 |
301.1 |
300.2 |
C4 |
C3 |
C2 |
C1 |
308.4 |
303.0 |
C4 |
C3 |
C2 |
O2 |
189.6 |
183.1 |
C4 |
C3 |
C2 |
H2 |
67.4 |
62.9 |
C2 |
C3 |
C4 |
O3 |
231.8 |
240.1 |
C2 |
C3 |
C4 |
H3 |
115.3 |
119.9 |
O3 |
C3 |
C4 |
H3 |
243.5 |
239.7 |
C4 |
C3 |
O3 |
HO3 |
52.5 |
180.5 |
C5 |
C4 |
C3 |
O4 |
236.5 |
240.1 |
C5 |
C4 |
C3 |
H4 |
118.2 |
119.9 |
C3 |
C4 |
C5 |
C6 |
191.8 |
182.4 |
C3 |
C4 |
C5 |
O5 |
315.5 |
302.4 |
C3 |
C4 |
C5 |
H5 |
74.9 |
62.4 |
O4 |
C4 |
C3 |
H4 |
241.7 |
239.8 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
60.0 |
O3 |
C3 |
C2 |
C1 |
181.1 |
183.1 |
O3 |
C3 |
C2 |
O2 |
62.3 |
63.3 |
O3 |
C3 |
C2 |
H2 |
300.0 |
303.1 |
C2 |
C3 |
O3 |
C4 |
127.6 |
119.5 |
C2 |
C3 |
O3 |
H3 |
243.2 |
239.7 |
C4 |
C3 |
O3 |
H3 |
115.7 |
120.2 |
O3 |
C3 |
C4 |
C5 |
171.8 |
176.8 |
O3 |
C3 |
C4 |
O4 |
295.3 |
296.8 |
O3 |
C3 |
C4 |
H4 |
53.6 |
57.0 |
H3 |
C3 |
C2 |
C1 |
63.6 |
62.8 |
H3 |
C3 |
C2 |
O2 |
304.8 |
303.0 |
H3 |
C3 |
C2 |
H2 |
182.5 |
182.8 |
C2 |
C3 |
H3 |
C4 |
240.8 |
240.5 |
C2 |
C3 |
H3 |
O3 |
121.4 |
120.3 |
C4 |
C3 |
H3 |
O3 |
240.6 |
239.8 |
H3 |
C3 |
C4 |
C5 |
288.3 |
297.1 |
H3 |
C3 |
C4 |
O4 |
51.8 |
57.0 |
H3 |
C3 |
C4 |
H4 |
170.1 |
177.3 |
H3 |
C3 |
O3 |
HO3 |
296.8 |
60.3 |
C5 |
C4 |
C3 |
O3 |
171.8 |
176.8 |
C5 |
C4 |
C3 |
H3 |
288.3 |
297.1 |
C3 |
C4 |
C5 |
O4 |
122.9 |
119.9 |
C3 |
C4 |
C5 |
H4 |
241.8 |
240.1 |
O4 |
C4 |
C5 |
H4 |
118.9 |
120.2 |
C5 |
C4 |
O4 |
HO4 |
304.9 |
179.7 |
C6 |
C5 |
C4 |
O5 |
236.3 |
240.0 |
C6 |
C5 |
C4 |
H5 |
116.9 |
120.0 |
C4 |
C5 |
C6 |
O6 |
217.5 |
185.0 |
C4 |
C5 |
C6 |
H61 |
337.7 |
305.0 |
C4 |
C5 |
C6 |
H62 |
97.3 |
65.0 |
O5 |
C5 |
C4 |
H5 |
240.6 |
240.0 |
C4 |
C5 |
O5 |
C1 |
57.1 |
61.1 |
O4 |
C4 |
C3 |
O3 |
295.3 |
296.8 |
O4 |
C4 |
C3 |
H3 |
51.8 |
57.0 |
C3 |
C4 |
O4 |
C5 |
235.2 |
240.3 |
C3 |
C4 |
O4 |
H4 |
117.2 |
120.2 |
C5 |
C4 |
O4 |
H4 |
242.1 |
239.9 |
O4 |
C4 |
C5 |
C6 |
68.9 |
62.5 |
O4 |
C4 |
C5 |
O5 |
192.6 |
182.5 |
O4 |
C4 |
C5 |
H5 |
312.0 |
302.4 |
H4 |
C4 |
C3 |
O3 |
53.6 |
57.0 |
H4 |
C4 |
C3 |
H3 |
170.1 |
177.3 |
C3 |
C4 |
H4 |
C5 |
121.7 |
119.7 |
C3 |
C4 |
H4 |
O4 |
241.5 |
239.8 |
C5 |
C4 |
H4 |
O4 |
119.8 |
120.1 |
H4 |
C4 |
C5 |
C6 |
309.9 |
302.3 |
H4 |
C4 |
C5 |
O5 |
73.7 |
62.3 |
H4 |
C4 |
C5 |
H5 |
193.1 |
182.3 |
H4 |
C4 |
O4 |
HO4 |
62.8 |
299.8 |
C6 |
C5 |
C4 |
O4 |
68.9 |
62.5 |
C6 |
C5 |
C4 |
H4 |
309.9 |
302.3 |
C4 |
C5 |
C6 |
O5 |
124.4 |
120.0 |
C4 |
C5 |
C6 |
H5 |
243.2 |
240.0 |
O5 |
C5 |
C6 |
H5 |
118.8 |
120.1 |
C6 |
C5 |
O5 |
C1 |
180.6 |
181.2 |
O6 |
C6 |
C5 |
H61 |
239.8 |
240.0 |
O6 |
C6 |
C5 |
H62 |
120.2 |
120.0 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
H61 |
C6 |
C5 |
H62 |
240.4 |
240.0 |
C2 |
C1 |
O5 |
C5 |
292.3 |
298.8 |
O5 |
C5 |
C4 |
O4 |
192.6 |
182.5 |
O5 |
C5 |
C4 |
H4 |
73.7 |
62.3 |
C4 |
C5 |
O5 |
C6 |
236.6 |
240.0 |
C4 |
C5 |
O5 |
H5 |
118.5 |
119.9 |
C6 |
C5 |
O5 |
H5 |
242.0 |
239.9 |
O5 |
C5 |
C6 |
O6 |
93.1 |
65.1 |
O5 |
C5 |
C6 |
H61 |
213.3 |
185.1 |
O5 |
C5 |
C6 |
H62 |
332.9 |
305.0 |
O1 |
C1 |
O5 |
C5 |
171.2 |
178.9 |
C5 |
O5 |
C1 |
H1 |
51.0 |
58.8 |
H5 |
C5 |
C4 |
O4 |
312.0 |
302.4 |
H5 |
C5 |
C4 |
H4 |
193.1 |
182.3 |
C4 |
C5 |
H5 |
C6 |
118.6 |
120.0 |
C4 |
C5 |
H5 |
O5 |
238.6 |
240.1 |
C6 |
C5 |
H5 |
O5 |
120.0 |
120.0 |
H5 |
C5 |
C6 |
O6 |
334.3 |
305.0 |
H5 |
C5 |
C6 |
H61 |
94.5 |
65.0 |
H5 |
C5 |
C6 |
H62 |
214.1 |
185.0 |
H5 |
C5 |
O5 |
C1 |
298.6 |
301.2 |
O6 |
C6 |
C5 |
O5 |
93.1 |
65.1 |
O6 |
C6 |
C5 |
H5 |
334.3 |
305.0 |
C5 |
C6 |
O6 |
H61 |
120.2 |
120.0 |
C5 |
C6 |
O6 |
H62 |
239.8 |
240.0 |
H61 |
C6 |
O6 |
H62 |
119.6 |
120.0 |
H61 |
C6 |
C5 |
O5 |
213.3 |
185.1 |
H61 |
C6 |
C5 |
H5 |
94.5 |
65.0 |
C5 |
C6 |
H61 |
O6 |
238.7 |
240.0 |
C5 |
C6 |
H61 |
H62 |
119.4 |
120.0 |
O6 |
C6 |
H61 |
H62 |
240.6 |
239.9 |
H61 |
C6 |
O6 |
HO6 |
59.8 |
60.0 |
H62 |
C6 |
C5 |
O5 |
332.9 |
305.0 |
H62 |
C6 |
C5 |
H5 |
214.1 |
185.0 |
C5 |
C6 |
H62 |
O6 |
121.3 |
120.0 |
C5 |
C6 |
H62 |
H61 |
240.6 |
240.0 |
O6 |
C6 |
H62 |
H61 |
119.4 |
120.0 |
H62 |
C6 |
O6 |
HO6 |
300.2 |
300.0 |
O1 |
C1 |
C2 |
O2 |
302.6 |
297.5 |
O1 |
C1 |
C2 |
H2 |
64.8 |
57.6 |
C2 |
C1 |
O1 |
O5 |
239.3 |
240.1 |
C2 |
C1 |
O1 |
H1 |
119.1 |
120.1 |
C5 |
O5 |
C1 |
O1 |
171.2 |
178.9 |
O5 |
C1 |
O1 |
H1 |
239.8 |
239.9 |
O5 |
C1 |
C2 |
O2 |
182.1 |
177.5 |
O5 |
C1 |
C2 |
H2 |
304.3 |
297.7 |
C2 |
C1 |
O5 |
O1 |
121.1 |
120.0 |
C2 |
C1 |
O5 |
H1 |
241.4 |
240.0 |
C1 |
O5 |
C5 |
H5 |
298.6 |
301.2 |
O1 |
C1 |
O5 |
H1 |
120.3 |
120.1 |
O5 |
C1 |
O1 |
HO1 |
300.7 |
299.9 |
H1 |
C1 |
C2 |
O2 |
62.6 |
57.5 |
H1 |
C1 |
C2 |
H2 |
184.8 |
177.7 |
C2 |
C1 |
H1 |
O1 |
239.6 |
239.9 |
C2 |
C1 |
H1 |
O5 |
119.6 |
119.9 |
O1 |
C1 |
H1 |
O5 |
240.0 |
239.9 |
H1 |
C1 |
O1 |
HO1 |
60.9 |
60.0 |
HO1 |
O1 |
C1 |
O5 |
300.7 |
299.9 |
HO1 |
O1 |
C1 |
H1 |
60.9 |
60.0 |
HO2 |
O2 |
C2 |
H2 |
301.1 |
300.2 |
HO3 |
O3 |
C3 |
H3 |
296.8 |
60.3 |
HO4 |
O4 |
C4 |
H4 |
62.8 |
299.8 |
HO6 |
O6 |
C6 |
H61 |
59.8 |
60.0 |
HO6 |
O6 |
C6 |
H62 |
300.2 |
300.0 |