PDB Chemical Component BEK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BEK
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O |
1.353 |
1.216 |
C1 |
N |
1.368 |
1.348 |
C1 |
C2 |
1.400 |
1.474 |
N |
HN1 |
1.020 |
0.969 |
N |
HN2 |
1.020 |
0.970 |
C2 |
C3 |
1.447 |
1.400 |
C2 |
C7 |
1.503 |
1.400 |
C3 |
F3 |
1.185 |
1.351 |
C3 |
C4 |
1.422 |
1.380 |
C7 |
F7 |
1.190 |
1.351 |
C7 |
C6 |
1.443 |
1.380 |
C4 |
C5 |
1.475 |
1.390 |
C4 |
F4 |
1.102 |
1.351 |
C6 |
C5 |
1.485 |
1.390 |
C6 |
F6 |
1.110 |
1.351 |
C5 |
O5 |
1.162 |
1.358 |
O5 |
C8 |
1.413 |
1.428 |
C8 |
H81 |
1.115 |
1.090 |
C8 |
H82 |
1.115 |
1.091 |
C8 |
H83 |
1.116 |
1.089 |
Bond Angles for BEK
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C1 |
N |
114.2 |
120.0 |
O |
C1 |
C2 |
131.4 |
120.0 |
N |
C1 |
C2 |
114.4 |
120.0 |
C1 |
N |
HN1 |
114.4 |
120.0 |
C1 |
N |
HN2 |
114.2 |
120.0 |
C1 |
C2 |
C3 |
115.1 |
120.1 |
C1 |
C2 |
C7 |
124.1 |
120.1 |
HN1 |
N |
HN2 |
131.3 |
120.0 |
C3 |
C2 |
C7 |
120.8 |
119.7 |
C2 |
C3 |
F3 |
120.6 |
120.1 |
C2 |
C3 |
C4 |
119.5 |
119.9 |
C2 |
C7 |
F7 |
122.4 |
120.1 |
C2 |
C7 |
C6 |
118.9 |
119.9 |
F3 |
C3 |
C4 |
119.9 |
120.1 |
C3 |
C4 |
C5 |
122.0 |
120.1 |
C3 |
C4 |
F4 |
117.5 |
119.9 |
F7 |
C7 |
C6 |
118.7 |
120.1 |
C7 |
C6 |
C5 |
120.1 |
120.2 |
C7 |
C6 |
F6 |
118.7 |
119.9 |
C5 |
C4 |
F4 |
120.5 |
119.9 |
C4 |
C5 |
C6 |
118.7 |
120.2 |
C4 |
C5 |
O5 |
115.0 |
119.9 |
C5 |
C6 |
F6 |
121.2 |
119.9 |
C6 |
C5 |
O5 |
126.3 |
119.9 |
C5 |
O5 |
C8 |
130.0 |
106.8 |
O5 |
C8 |
H81 |
130.0 |
109.5 |
O5 |
C8 |
H82 |
105.0 |
109.4 |
O5 |
C8 |
H83 |
105.0 |
109.5 |
H81 |
C8 |
H82 |
105.1 |
109.5 |
H81 |
C8 |
H83 |
105.1 |
109.5 |
H82 |
C8 |
H83 |
104.1 |
109.4 |
Torsion Angles for BEK
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
C1 |
O |
C2 |
176.7 |
180.0 |
O |
C1 |
N |
HN1 |
2.8 |
0.0 |
O |
C1 |
N |
HN2 |
179.9 |
180.1 |
O |
C1 |
C2 |
C3 |
48.3 |
89.9 |
O |
C1 |
C2 |
C7 |
229.0 |
270.0 |
O |
C1 |
N |
C2 |
182.7 |
180.0 |
N |
C1 |
C2 |
C3 |
231.6 |
270.0 |
N |
C1 |
C2 |
C7 |
52.3 |
90.0 |
HN1 |
N |
C1 |
HN2 |
182.8 |
180.0 |
O |
C1 |
C2 |
N |
176.7 |
180.0 |
C2 |
C1 |
N |
HN1 |
180.1 |
180.0 |
C2 |
C1 |
N |
HN2 |
357.2 |
0.0 |
C3 |
C2 |
C1 |
C7 |
179.3 |
180.0 |
C1 |
C2 |
C3 |
F3 |
0.3 |
0.0 |
C1 |
C2 |
C3 |
C4 |
180.5 |
180.1 |
C1 |
C2 |
C7 |
F7 |
359.3 |
0.0 |
C1 |
C2 |
C7 |
C6 |
179.1 |
179.6 |
HN1 |
N |
C1 |
C2 |
180.1 |
180.0 |
C1 |
N |
HN1 |
HN2 |
176.5 |
180.0 |
HN2 |
N |
C1 |
C2 |
357.2 |
0.0 |
C1 |
N |
HN2 |
HN1 |
183.5 |
180.0 |
C1 |
C2 |
C3 |
C7 |
180.7 |
180.0 |
C3 |
C2 |
C7 |
F7 |
180.1 |
180.0 |
C3 |
C2 |
C7 |
C6 |
359.9 |
359.7 |
F3 |
C3 |
C2 |
C4 |
179.8 |
180.0 |
C2 |
C3 |
C4 |
C5 |
0.5 |
360.0 |
C2 |
C3 |
C4 |
F4 |
179.9 |
180.0 |
C1 |
C2 |
C7 |
C3 |
179.2 |
180.0 |
C7 |
C2 |
C3 |
F3 |
179.6 |
180.0 |
C7 |
C2 |
C3 |
C4 |
359.8 |
0.0 |
F7 |
C7 |
C2 |
C6 |
180.2 |
180.4 |
C2 |
C7 |
C6 |
C5 |
0.1 |
0.6 |
C2 |
C7 |
C6 |
F6 |
179.8 |
180.0 |
F3 |
C3 |
C2 |
C7 |
179.6 |
180.0 |
C2 |
C3 |
F3 |
C4 |
180.2 |
180.0 |
F3 |
C3 |
C4 |
C5 |
180.7 |
180.0 |
F3 |
C3 |
C4 |
F4 |
0.2 |
0.0 |
C4 |
C3 |
C2 |
C7 |
359.8 |
0.0 |
C2 |
C3 |
C4 |
F3 |
179.8 |
180.0 |
C5 |
C4 |
C3 |
F4 |
180.5 |
180.0 |
C3 |
C4 |
C5 |
C6 |
359.5 |
0.3 |
C3 |
C4 |
C5 |
O5 |
179.4 |
180.0 |
C2 |
C7 |
F7 |
C6 |
179.8 |
179.6 |
F7 |
C7 |
C6 |
C5 |
179.9 |
180.2 |
F7 |
C7 |
C6 |
F6 |
359.7 |
359.6 |
C2 |
C7 |
C6 |
F7 |
180.2 |
180.4 |
C4 |
C5 |
C6 |
C7 |
0.2 |
359.5 |
C5 |
C6 |
C7 |
F6 |
180.3 |
180.6 |
C7 |
C6 |
C5 |
O5 |
180.3 |
179.7 |
C3 |
C4 |
C5 |
F4 |
179.4 |
180.0 |
C7 |
C6 |
C5 |
C4 |
0.2 |
359.5 |
C4 |
C5 |
C6 |
F6 |
180.5 |
180.1 |
C6 |
C5 |
C4 |
O5 |
180.1 |
180.3 |
C4 |
C5 |
O5 |
C8 |
180.8 |
90.0 |
C3 |
C4 |
F4 |
C5 |
180.5 |
180.0 |
F4 |
C4 |
C5 |
C6 |
180.1 |
180.2 |
F4 |
C4 |
C5 |
O5 |
360.0 |
360.0 |
C7 |
C6 |
C5 |
F6 |
179.7 |
179.4 |
C6 |
C5 |
C4 |
F4 |
180.1 |
180.2 |
C4 |
C5 |
C6 |
O5 |
179.9 |
179.7 |
C6 |
C5 |
O5 |
C8 |
0.7 |
269.8 |
C7 |
C6 |
F6 |
C5 |
180.3 |
180.6 |
F6 |
C6 |
C5 |
O5 |
0.6 |
0.3 |
O5 |
C5 |
C4 |
F4 |
360.0 |
360.0 |
C4 |
C5 |
O5 |
C6 |
180.1 |
180.3 |
O5 |
C5 |
C6 |
F6 |
0.6 |
0.3 |
C5 |
O5 |
C8 |
H81 |
180.0 |
180.0 |
C5 |
O5 |
C8 |
H82 |
305.3 |
300.0 |
C5 |
O5 |
C8 |
H83 |
54.7 |
59.9 |
H81 |
C8 |
O5 |
H82 |
234.7 |
240.0 |
H81 |
C8 |
O5 |
H83 |
125.3 |
120.1 |
H82 |
C8 |
O5 |
H83 |
250.5 |
240.0 |
O5 |
C8 |
H81 |
H82 |
125.3 |
120.0 |
O5 |
C8 |
H81 |
H83 |
234.8 |
239.9 |
H82 |
C8 |
H81 |
H83 |
109.5 |
120.0 |
O5 |
C8 |
H82 |
H81 |
220.4 |
240.0 |
O5 |
C8 |
H82 |
H83 |
110.1 |
120.0 |
H81 |
C8 |
H82 |
H83 |
249.7 |
240.0 |
O5 |
C8 |
H83 |
H81 |
139.6 |
120.0 |
O5 |
C8 |
H83 |
H82 |
249.9 |
240.0 |
H81 |
C8 |
H83 |
H82 |
110.3 |
120.0 |