PDB Chemical Component BCN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BCN

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C1 1.468 1.468
N1 C3 1.470 1.470
N1 C5 1.466 1.468
C1 C2 1.529 1.506
C1 H11 1.116 1.089
C1 H12 1.114 1.090
C2 O21 1.253 1.208
C2 O22 1.253 1.341
O22 HO2 0.949 0.967
C3 C4 1.527 1.529
C3 H31 1.115 1.089
C3 H32 1.115 1.090
C4 O4 1.423 1.428
C4 H41 1.116 1.091
C4 H42 1.115 1.090
O4 HO4 0.951 0.967
C5 C6 1.530 1.529
C5 H51 1.114 1.090
C5 H52 1.115 1.090
C6 O6 1.430 1.428
C6 H61 1.114 1.090
C6 H62 1.116 1.091
O6 HO6 0.950 0.966

Bond Angles for BCN

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 N1 C3 110.4 106.7
C1 N1 C5 110.4 106.7
N1 C1 C2 111.0 109.5
N1 C1 H11 111.6 109.5
N1 C1 H12 111.7 109.5
C3 N1 C5 109.7 106.7
N1 C3 C4 110.7 109.4
N1 C3 H31 111.8 109.5
N1 C3 H32 111.8 109.4
N1 C5 C6 109.5 109.5
N1 C5 H51 112.2 109.5
N1 C5 H52 112.2 109.5
C2 C1 H11 111.6 109.5
C2 C1 H12 111.7 109.5
C1 C2 O21 118.1 120.0
C1 C2 O22 119.7 120.0
H11 C1 H12 98.7 109.4
O21 C2 O22 122.2 120.0
C2 O22 HO2 119.7 120.1
C4 C3 H31 111.7 109.5
C4 C3 H32 111.7 109.5
C3 C4 O4 109.8 109.5
C3 C4 H41 112.1 109.5
C3 C4 H42 112.1 109.5
H31 C3 H32 98.6 109.5
O4 C4 H41 112.1 109.4
O4 C4 H42 112.1 109.5
C4 O4 HO4 109.8 106.9
H41 C4 H42 98.2 109.5
C6 C5 H51 112.2 109.4
C6 C5 H52 112.2 109.5
C5 C6 O6 109.4 109.5
C5 C6 H61 112.3 109.5
C5 C6 H62 112.2 109.4
H51 C5 H52 98.3 109.4
O6 C6 H61 112.3 109.5
O6 C6 H62 112.3 109.5
C6 O6 HO6 109.4 106.8
H61 C6 H62 98.2 109.5

Torsion Angles for BCN

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 N1 C1 C5 121.5 246.2
C1 N1 C3 C4 95.3 284.8
C1 N1 C3 H31 220.5 164.8
C1 N1 C3 H32 330.0 44.8
C1 N1 C5 C6 217.7 84.2
C1 N1 C5 H51 343.0 204.2
C1 N1 C5 H52 92.5 324.2
C2 C1 N1 H11 234.8 240.0
C2 C1 N1 H12 125.3 120.0
N1 C1 C2 O21 186.9 7.1
N1 C1 C2 O22 6.9 187.0
H11 C1 N1 H12 250.5 240.1
C1 N1 C3 C5 238.1 113.8
C3 N1 C1 C2 208.5 95.6
C3 N1 C1 H11 333.7 215.7
C3 N1 C1 H12 83.2 335.6
C3 N1 C5 C6 95.9 198.0
C3 N1 C5 H51 221.1 318.0
C3 N1 C5 H52 330.6 78.0
C4 C3 N1 H31 234.8 120.0
C4 C3 N1 H32 125.3 240.0
N1 C3 C4 O4 24.6 77.5
N1 C3 C4 H41 149.9 317.5
N1 C3 C4 H42 259.3 197.5
H31 C3 N1 H32 250.5 120.0
C1 N1 C5 C3 121.9 246.2
C5 N1 C1 C2 87.0 209.4
C5 N1 C1 H11 212.3 329.4
C5 N1 C1 H12 321.7 89.4
C5 N1 C3 C4 217.2 171.0
C5 N1 C3 H31 342.4 51.0
C5 N1 C3 H32 91.9 291.0
C6 C5 N1 H51 234.7 240.0
C6 C5 N1 H52 125.2 120.0
N1 C5 C6 O6 44.7 65.2
N1 C5 C6 H61 170.0 185.2
N1 C5 C6 H62 279.5 305.2
H51 C5 N1 H52 250.5 240.0
C2 C1 N1 C3 208.5 95.6
C2 C1 N1 C5 87.0 209.4
N1 C1 C2 H11 125.2 120.0
N1 C1 C2 H12 234.7 239.9
H11 C1 C2 H12 109.5 119.9
O21 C2 C1 O22 180.1 180.0
C1 C2 O22 HO2 180.0 180.0
H11 C1 N1 C3 333.7 215.7
H11 C1 N1 C5 212.3 329.4
N1 C1 H11 C2 235.1 240.0
N1 C1 H11 H12 117.5 120.0
C2 C1 H11 H12 242.4 240.1
H11 C1 C2 O21 61.7 247.0
H11 C1 C2 O22 241.7 67.0
H12 C1 N1 C3 83.2 335.6
H12 C1 N1 C5 321.7 89.4
N1 C1 H12 C2 124.9 120.1
N1 C1 H12 H11 242.5 240.0
C2 C1 H12 H11 117.5 119.9
H12 C1 C2 O21 312.3 127.1
H12 C1 C2 O22 132.2 307.1
O21 C2 C1 H11 61.7 247.0
O21 C2 C1 H12 312.3 127.1
C1 C2 O21 O22 179.9 180.0
O21 C2 O22 HO2 359.9 360.0
O22 C2 C1 H11 241.7 67.0
O22 C2 C1 H12 132.2 307.1
C1 C2 O22 O21 180.1 180.0
C4 C3 N1 C5 217.2 171.0
N1 C3 C4 H31 125.3 240.0
N1 C3 C4 H32 234.7 119.9
H31 C3 C4 H32 109.4 240.0
O4 C4 C3 H41 234.7 120.0
O4 C4 C3 H42 125.3 240.0
C3 C4 O4 HO4 180.0 180.0
H41 C4 C3 H42 250.6 120.0
H31 C3 N1 C5 342.4 51.0
N1 C3 H31 C4 235.3 120.0
N1 C3 H31 H32 117.7 240.0
C4 C3 H31 H32 242.4 120.0
H31 C3 C4 O4 259.3 197.5
H31 C3 C4 H41 24.6 77.5
H31 C3 C4 H42 134.0 317.5
H32 C3 N1 C5 91.9 291.0
N1 C3 H32 C4 124.7 240.1
N1 C3 H32 H31 242.3 120.0
C4 C3 H32 H31 117.6 240.0
H32 C3 C4 O4 150.0 317.5
H32 C3 C4 H41 275.2 197.6
H32 C3 C4 H42 24.6 77.6
O4 C4 C3 H31 259.3 197.5
O4 C4 C3 H32 150.0 317.5
C3 C4 O4 H41 125.3 240.0
C3 C4 O4 H42 234.7 120.0
H41 C4 O4 H42 109.4 240.1
H41 C4 C3 H31 24.6 77.5
H41 C4 C3 H32 275.2 197.6
C3 C4 H41 O4 236.0 120.1
C3 C4 H41 H42 118.0 240.0
O4 C4 H41 H42 242.0 119.9
H41 C4 O4 HO4 54.7 300.0
H42 C4 C3 H31 134.0 317.5
H42 C4 C3 H32 24.6 77.6
C3 C4 H42 O4 124.0 239.9
C3 C4 H42 H41 242.0 120.0
O4 C4 H42 H41 118.0 240.1
H42 C4 O4 HO4 305.3 59.9
HO4 O4 C4 H41 54.7 300.0
HO4 O4 C4 H42 305.3 59.9
N1 C5 C6 H51 125.3 120.1
N1 C5 C6 H52 234.8 239.9
H51 C5 C6 H52 109.5 119.9
O6 C6 C5 H61 234.7 240.0
O6 C6 C5 H62 125.3 120.0
C5 C6 O6 HO6 180.0 180.0
H61 C6 C5 H62 250.5 240.0
N1 C5 H51 C6 236.2 240.0
N1 C5 H51 H52 118.1 120.0
C6 C5 H51 H52 241.9 240.1
H51 C5 C6 O6 279.4 305.2
H51 C5 C6 H61 44.7 65.2
H51 C5 C6 H62 154.2 185.2
N1 C5 H52 C6 123.8 120.1
N1 C5 H52 H51 241.9 240.0
C6 C5 H52 H51 118.1 119.9
H52 C5 C6 O6 169.9 185.3
H52 C5 C6 H61 295.2 305.3
H52 C5 C6 H62 44.7 65.3
O6 C6 C5 H51 279.4 305.2
O6 C6 C5 H52 169.9 185.3
C5 C6 O6 H61 125.3 120.0
C5 C6 O6 H62 234.8 240.1
H61 C6 O6 H62 109.5 120.0
H61 C6 C5 H51 44.7 65.2
H61 C6 C5 H52 295.2 305.3
C5 C6 H61 O6 236.3 240.0
C5 C6 H61 H62 118.1 119.9
O6 C6 H61 H62 241.8 240.0
H61 C6 O6 HO6 54.7 60.0
H62 C6 C5 H51 154.2 185.2
H62 C6 C5 H52 44.7 65.3
C5 C6 H62 O6 123.7 120.0
C5 C6 H62 H61 241.8 240.0
O6 C6 H62 H61 118.2 120.0
H62 C6 O6 HO6 305.2 300.0
HO6 O6 C6 H61 54.7 60.0
HO6 O6 C6 H62 305.2 300.0