PDB Chemical Component BCM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BCM

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C5A	C5	1.258	1.310
C5A	H5A1	1.103	1.080
C5A	H5A2	1.103	1.080
C5	C6	1.510	1.493
C5	C4	1.536	1.502
C6	O6	1.435	1.429
C6	N10	1.451	1.483
C6	C7	1.508	1.496
O6	HO6	0.950	0.966
N10	C9	1.322	1.351
N10	H10	1.020	0.970
C9	O9	1.217	1.213
C9	C1	1.520	1.473
C4	C3	1.551	1.530
C4	H41	1.115	1.090
C4	H42	1.115	1.091
C3	O2	1.458	1.489
C3	H31	1.115	1.090
C3	H32	1.115	1.091
O2	C1	1.442	1.412
C1	N8	1.451	1.474
C1	C1A	1.541	1.530
N8	C7	1.318	1.356
N8	HN8	1.020	0.970
C7	O7	1.223	1.213
C1A	O1A	1.427	1.428
C1A	C2A	1.537	1.530
C1A	H1A	1.115	1.090
O1A	H1O	0.950	0.967
C2A	C2B	1.517	1.530
C2A	O2A	1.428	1.430
C2A	C3A	1.524	1.530
C2B	HB1	1.115	1.090
C2B	HB2	1.115	1.090
C2B	HB3	1.115	1.091
O2A	H2O	0.950	0.967
C3A	O3A	1.424	1.429
C3A	HA1	1.115	1.089
C3A	HA2	1.115	1.090
O3A	H3O	0.950	0.967

Bond Angles for BCM

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C5	C5A	H5A1	115.8	120.0
C5	C5A	H5A2	124.6	119.9
C5A	C5	C6	115.7	118.1
C5A	C5	C4	124.6	118.2
H5A1	C5A	H5A2	119.6	120.0
C6	C5	C4	119.6	123.7
C5	C6	O6	111.6	110.1
C5	C6	N10	102.3	105.4
C5	C6	C7	97.4	112.2
C5	C4	C3	111.8	109.0
C5	C4	H41	111.3	109.6
C5	C4	H42	111.3	109.5
O6	C6	N10	113.3	110.1
O6	C6	C7	112.2	110.1
C6	O6	HO6	111.6	106.8
N10	C6	C7	118.2	108.9
C6	N10	C9	123.7	115.8
C6	N10	H10	123.1	122.0
C6	C7	N8	117.0	120.8
C6	C7	O7	120.4	119.6
C9	N10	H10	113.2	122.2
N10	C9	O9	120.2	119.8
N10	C9	C1	117.6	120.8
O9	C9	C1	121.8	119.4
C9	C1	O2	99.9	119.9
C9	C1	N8	117.1	113.6
C9	C1	C1A	117.4	103.9
C3	C4	H41	111.4	109.6
C3	C4	H42	111.3	109.5
C4	C3	O2	117.9	110.1
C4	C3	H31	109.2	109.2
C4	C3	H32	109.2	109.1
H41	C4	H42	99.0	109.6
O2	C3	H31	109.2	109.2
O2	C3	H32	109.2	110.0
C3	O2	C1	115.3	108.5
H31	C3	H32	100.9	109.1
O2	C1	N8	101.4	110.3
O2	C1	C1A	113.5	103.8
N8	C1	C1A	106.4	103.1
C1	N8	C7	124.8	116.6
C1	N8	HN8	122.8	121.7
C1	C1A	O1A	107.8	109.5
C1	C1A	C2A	118.2	109.5
C1	C1A	H1A	104.7	109.5
C7	N8	HN8	112.4	121.7
N8	C7	O7	122.0	119.6
O1A	C1A	C2A	110.0	109.5
O1A	C1A	H1A	113.8	109.5
C1A	O1A	H1O	107.8	106.9
C2A	C1A	H1A	102.3	109.5
C1A	C2A	C2B	110.8	109.5
C1A	C2A	O2A	112.3	109.4
C1A	C2A	C3A	109.9	109.5
C2B	C2A	O2A	105.4	109.5
C2B	C2A	C3A	109.3	109.5
C2A	C2B	HB1	111.7	109.5
C2A	C2B	HB2	110.8	109.4
C2A	C2B	HB3	111.7	109.4
O2A	C2A	C3A	109.0	109.4
C2A	O2A	H2O	112.2	106.8
C2A	C3A	O3A	110.3	109.5
C2A	C3A	HA1	111.9	109.5
C2A	C3A	HA2	111.9	109.4
HB1	C2B	HB2	111.7	109.5
HB1	C2B	HB3	98.7	109.5
HB2	C2B	HB3	111.7	109.5
O3A	C3A	HA1	111.9	109.5
O3A	C3A	HA2	111.9	109.5
C3A	O3A	H3O	110.3	106.9
HA1	C3A	HA2	98.5	109.4

Torsion Angles for BCM

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H5A1	C5A	C5	H5A2	177.2	180.0
C6	C5	C5A	C4	182.8	180.0
C5A	C5	C6	O6	339.2	345.5
C5A	C5	C6	N10	217.7	226.8
C5A	C5	C6	C7	96.7	108.5
C5A	C5	C4	C3	241.1	246.1
C5A	C5	C4	H41	115.8	6.0
C5A	C5	C4	H42	6.3	126.3
C5	C5A	H5A1	H5A2	182.7	180.0
H5A1	C5A	C5	C6	180.0	0.0
H5A1	C5A	C5	C4	357.2	180.0
C5	C5A	H5A2	H5A1	177.1	180.0
H5A2	C5A	C5	C6	2.8	180.0
H5A2	C5A	C5	C4	180.0	0.0
C6	C5	C5A	H5A1	180.0	0.0
C6	C5	C5A	H5A2	2.8	180.0
C5A	C5	C6	C4	177.3	180.0
C6	C5	C4	C3	58.1	66.1
C6	C5	C4	H41	292.8	186.0
C6	C5	C4	H42	183.4	306.3
O6	C6	C5	N10	121.5	118.7
O6	C6	C5	C7	242.5	237.0
C5	C6	O6	HO6	180.0	184.2
N10	C6	C5	C7	121.1	118.3
C5	C6	N10	C9	265.8	286.9
C5	C6	N10	H10	85.8	106.4
C5	C6	C7	N8	96.9	77.9
C5	C6	C7	O7	285.4	257.9
C4	C5	C5A	H5A1	357.2	180.0
C4	C5	C5A	H5A2	180.0	0.0
C5A	C5	C4	C6	182.9	180.0
C4	C5	C6	O6	161.9	165.6
C4	C5	C6	N10	40.4	46.9
C4	C5	C6	C7	279.3	288.5
C3	C4	C5	H41	125.3	240.1
C3	C4	C5	H42	234.7	119.8
C5	C4	C3	O2	267.2	256.2
C5	C4	C3	H31	142.0	16.1
C5	C4	C3	H32	32.5	135.4
H41	C4	C5	H42	109.4	239.7
O6	C6	C5	C4	161.9	165.6
C5	C6	O6	N10	245.1	244.3
C5	C6	O6	C7	108.2	124.2
N10	C6	O6	C7	223.0	240.0
O6	C6	N10	C9	145.5	168.2
O6	C6	N10	H10	325.5	347.7
O6	C6	C7	N8	213.9	200.9
O6	C6	C7	O7	42.4	20.9
N10	C6	C5	C4	40.4	46.9
C5	C6	N10	O6	120.3	118.7
C5	C6	N10	C7	254.5	239.4
O6	C6	N10	C7	134.2	120.7
N10	C6	O6	HO6	294.9	299.9
N10	C6	C7	N8	348.5	321.7
N10	C6	C7	O7	177.1	141.7
C9	N10	C6	H10	180.0	180.5
C6	N10	C9	O9	171.8	163.1
C6	N10	C9	C1	359.0	341.9
C7	C6	C5	C4	279.3	288.5
C5	C6	C7	O6	243.0	237.0
C5	C6	C7	N10	108.3	116.2
O6	C6	C7	N10	225.3	239.2
C7	C6	O6	HO6	71.8	60.0
C7	C6	N10	C9	11.3	47.5
C7	C6	N10	H10	191.3	227.0
C1	N8	C7	C6	1.6	358.6
C6	C7	N8	HN8	181.6	178.7
N8	C7	C6	O7	171.5	180.0
HO6	O6	C6	N10	294.9	299.9
HO6	O6	C6	C7	71.8	60.0
C9	N10	C6	C7	11.3	47.5
C6	N10	C9	H10	180.0	179.5
O9	C9	N10	C1	172.8	181.2
N10	C9	C1	O2	99.5	110.1
N10	C9	C1	N8	351.2	336.7
N10	C9	C1	C1A	222.7	225.3
H10	N10	C6	C7	191.3	227.0
C6	N10	H10	C9	180.0	180.6
H10	N10	C9	O9	351.8	343.6
H10	N10	C9	C1	179.0	162.4
O9	C9	N10	H10	351.8	343.6
N10	C9	O9	C1	187.5	178.8
O9	C9	C1	O2	286.8	288.9
O9	C9	C1	N8	178.4	155.5
O9	C9	C1	C1A	49.9	44.1
C1	C9	N10	H10	179.0	162.4
N10	C9	C1	O9	172.7	181.2
C3	O2	C1	C9	275.0	282.7
O2	C1	C9	N8	108.3	133.4
O2	C1	C9	C1A	236.8	244.8
N8	C1	C9	C1A	128.5	111.3
C9	C1	N8	C7	8.6	32.9
C9	C1	N8	HN8	188.5	212.9
C9	C1	C1A	O1A	176.0	76.8
C9	C1	C1A	C2A	301.5	196.8
C9	C1	C1A	H1A	54.5	316.8
C5	C4	C3	H41	234.7	119.9
C5	C4	C3	H42	125.3	240.2
H41	C4	C3	H42	250.6	120.3
O2	C3	C4	H31	125.3	240.1
O2	C3	C4	H32	234.7	120.8
C4	C3	O2	C1	71.3	62.0
H31	C3	C4	H32	109.5	240.8
C5	C4	H41	C3	125.6	240.4
C5	C4	H41	H42	242.8	120.2
C3	C4	H41	H42	117.2	239.8
H41	C4	C3	O2	32.5	136.3
H41	C4	C3	H31	267.2	256.2
H41	C4	C3	H32	157.8	15.5
C5	C4	H42	C3	234.4	119.5
C5	C4	H42	H41	117.2	239.8
C3	C4	H42	H41	242.8	120.3
H42	C4	C3	O2	142.0	16.0
H42	C4	C3	H31	16.7	135.9
H42	C4	C3	H32	267.2	255.2
C9	C1	O2	C3	275.0	282.7
O2	C3	C4	H41	32.5	136.3
O2	C3	C4	H42	142.0	16.0
C4	C3	O2	H31	234.7	119.9
C4	C3	O2	H32	125.3	239.7
H31	C3	O2	H32	250.6	119.8
C3	O2	C1	N8	35.5	57.5
C3	O2	C1	C1A	149.1	167.4
H31	C3	C4	H41	267.2	256.2
H31	C3	C4	H42	16.7	135.9
C4	C3	H31	O2	130.2	239.6
C4	C3	H31	H32	245.1	119.2
O2	C3	H31	H32	114.9	239.7
H31	C3	O2	C1	196.6	302.1
H32	C3	C4	H41	157.8	15.5
H32	C3	C4	H42	267.2	255.2
C4	C3	H32	O2	229.8	120.9
C4	C3	H32	H31	114.9	240.7
O2	C3	H32	H31	245.1	119.8
H32	C3	O2	C1	306.0	182.3
C9	C1	O2	N8	239.5	225.2
C9	C1	O2	C1A	125.8	115.3
C1	O2	C3	H31	196.6	302.1
C1	O2	C3	H32	306.0	182.3
N8	C1	O2	C1A	246.3	250.1
O2	C1	N8	C7	261.0	255.0
O2	C1	N8	HN8	81.0	75.0
O2	C1	C1A	O1A	291.9	203.0
O2	C1	C1A	C2A	57.4	323.0
O2	C1	C1A	H1A	170.4	83.0
C6	C7	N8	C1	1.6	358.6
C9	C1	N8	O2	107.5	137.9
C9	C1	N8	C1A	226.4	248.2
O2	C1	N8	C1A	118.9	110.3
N8	C1	C1A	O1A	42.6	318.1
N8	C1	C1A	C2A	168.0	78.0
N8	C1	C1A	H1A	281.0	198.0
C7	N8	C1	HN8	180.0	180.0
C1	N8	C7	O7	172.9	178.6
C9	C1	C1A	O2	244.1	233.8
C9	C1	C1A	N8	133.4	118.8
O2	C1	C1A	N8	249.4	244.9
C1A	C1	N8	C7	142.1	144.7
C1A	C1	N8	HN8	322.1	324.7
O1A	C1A	C1	C2A	234.5	240.0
O1A	C1A	C1	H1A	121.5	120.0
C1	C1A	O1A	H1O	180.0	69.1
C2A	C1A	C1	H1A	247.0	240.0
C1	C1A	C2A	C2B	234.1	309.6
C1	C1A	C2A	O2A	351.7	69.6
C1	C1A	C2A	C3A	113.2	189.6
C6	C7	N8	O7	188.7	180.0
C7	N8	C1	C1A	142.1	144.7
C1	N8	C7	HN8	180.0	180.0
HN8	N8	C1	C1A	322.1	324.7
C1	N8	HN8	C7	180.0	180.0
HN8	N8	C7	O7	352.9	358.6
C6	C7	O7	N8	171.0	180.0
O7	C7	N8	HN8	352.9	358.6
C1	C1A	O1A	C2A	130.2	120.0
C1	C1A	O1A	H1A	244.3	240.0
C2A	C1A	O1A	H1A	114.1	120.0
O1A	C1A	C2A	C2B	358.5	69.6
O1A	C1A	C2A	O2A	116.1	189.6
O1A	C1A	C2A	C3A	237.6	309.6
C1	C1A	C2A	O1A	235.6	240.0
C1	C1A	C2A	H1A	114.3	120.0
O1A	C1A	C2A	H1A	238.7	239.9
C2A	C1A	O1A	H1O	49.8	309.1
C2B	C2A	C1A	O2A	242.4	240.0
C2B	C2A	C1A	C3A	120.9	120.1
C1A	C2A	C2B	HB1	54.7	174.9
C1A	C2A	C2B	HB2	180.0	294.9
C1A	C2A	C2B	HB3	305.3	54.9
O2A	C2A	C1A	C3A	238.5	240.1
C1A	C2A	O2A	H2O	180.0	60.0
C1A	C2A	C3A	O3A	77.3	180.0
C1A	C2A	C3A	HA1	312.0	300.1
C1A	C2A	C3A	HA2	202.5	60.0
C1	C1A	H1A	O1A	117.5	120.0
C1	C1A	H1A	C2A	236.1	240.0
O1A	C1A	H1A	C2A	118.6	120.0
H1A	C1A	O1A	H1O	295.7	189.1
H1A	C1A	C2A	C2B	119.8	189.7
H1A	C1A	C2A	O2A	237.4	309.7
H1A	C1A	C2A	C3A	358.9	69.6
H1O	O1A	C1A	C2A	49.8	309.1
H1O	O1A	C1A	H1A	295.7	189.1
C2B	C2A	C1A	H1A	119.8	189.7
C1A	C2A	C2B	O2A	121.7	120.0
C1A	C2A	C2B	C3A	238.8	240.0
O2A	C2A	C2B	C3A	117.1	120.0
C2B	C2A	O2A	H2O	300.8	180.0
C2B	C2A	C3A	O3A	315.5	60.0
C2B	C2A	C3A	HA1	190.2	180.0
C2B	C2A	C3A	HA2	80.7	300.0
HB1	C2B	C2A	HB2	234.7	240.0
HB1	C2B	C2A	HB3	109.4	120.0
HB2	C2B	C2A	HB3	234.7	240.0
O2A	C2A	C1A	H1A	237.4	309.7
C1A	C2A	O2A	C2B	239.2	240.0
C1A	C2A	O2A	C3A	121.9	120.0
C2B	C2A	O2A	C3A	242.7	240.0
O2A	C2A	C2B	HB1	293.0	54.9
O2A	C2A	C2B	HB2	58.3	174.9
O2A	C2A	C2B	HB3	183.6	294.9
O2A	C2A	C3A	O3A	200.7	300.0
O2A	C2A	C3A	HA1	75.4	60.0
O2A	C2A	C3A	HA2	325.9	180.0
C3A	C2A	C1A	H1A	358.9	69.6
C1A	C2A	C3A	C2B	121.8	120.0
C1A	C2A	C3A	O2A	236.6	240.1
C2B	C2A	C3A	O2A	114.8	120.0
C3A	C2A	C2B	HB1	176.0	295.0
C3A	C2A	C2B	HB2	301.3	54.9
C3A	C2A	C2B	HB3	66.5	175.0
C3A	C2A	O2A	H2O	58.0	300.0
O3A	C3A	C2A	HA1	125.3	239.9
O3A	C3A	C2A	HA2	234.8	120.0
C2A	C3A	O3A	H3O	180.0	180.0
HA1	C3A	C2A	HA2	109.5	240.1
HB1	C2B	C2A	O2A	293.0	54.9
HB1	C2B	C2A	C3A	176.0	295.0
C2A	C2B	HB1	HB2	124.8	120.0
C2A	C2B	HB1	HB3	242.4	240.0
HB2	C2B	HB1	HB3	117.6	120.1
HB2	C2B	C2A	O2A	58.3	174.9
HB2	C2B	C2A	C3A	301.3	54.9
C2A	C2B	HB2	HB1	234.7	240.0
C2A	C2B	HB2	HB3	125.3	120.0
HB1	C2B	HB2	HB3	250.6	239.9
HB3	C2B	C2A	O2A	183.6	294.9
HB3	C2B	C2A	C3A	66.5	175.0
C2A	C2B	HB3	HB1	117.6	120.0
C2A	C2B	HB3	HB2	235.2	240.0
HB1	C2B	HB3	HB2	117.6	120.1
H2O	O2A	C2A	C3A	58.0	300.0
C2A	C3A	O3A	HA1	234.7	120.1
C2A	C3A	O3A	HA2	125.3	240.0
HA1	C3A	O3A	HA2	250.5	120.0
C2A	C3A	HA1	O3A	124.4	239.9
C2A	C3A	HA1	HA2	242.2	119.9
O3A	C3A	HA1	HA2	117.8	240.0
HA1	C3A	O3A	H3O	305.2	60.0
C2A	C3A	HA2	O3A	235.6	120.0
C2A	C3A	HA2	HA1	117.8	240.0
O3A	C3A	HA2	HA1	242.2	120.0
HA2	C3A	O3A	H3O	54.7	300.0
H3O	O3A	C3A	HA1	305.2	60.0
H3O	O3A	C3A	HA2	54.7	300.0