PDB Chemical Component BBY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BBY
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.410 |
1.395 |
C1 |
C6 |
1.388 |
1.383 |
C2 |
C3 |
1.406 |
1.395 |
C2 |
C10 |
1.493 |
1.480 |
C3 |
C4 |
1.389 |
1.381 |
C4 |
C5 |
1.474 |
1.388 |
C4 |
BR15 |
1.881 |
1.891 |
C5 |
C6 |
1.451 |
1.394 |
C5 |
O9 |
1.364 |
1.366 |
C6 |
O7 |
1.371 |
1.365 |
O7 |
C8 |
1.448 |
1.440 |
C8 |
O9 |
1.438 |
1.440 |
C10 |
N11 |
1.348 |
1.363 |
C10 |
C14 |
1.393 |
1.366 |
N11 |
N12 |
1.401 |
1.401 |
N11 |
C16 |
1.486 |
1.465 |
N12 |
C13 |
1.345 |
1.312 |
C13 |
C14 |
1.379 |
1.401 |
C13 |
N17 |
1.356 |
1.400 |
C1 |
H1 |
1.080 |
1.081 |
C3 |
H3 |
1.080 |
1.080 |
C8 |
H8 |
1.100 |
1.090 |
C8 |
H8A |
1.100 |
1.089 |
C14 |
H14 |
1.080 |
1.080 |
C16 |
H16 |
1.100 |
1.091 |
C16 |
H16A |
1.100 |
1.090 |
C16 |
H16B |
1.100 |
1.089 |
N17 |
HN17 |
1.000 |
0.970 |
N17 |
HN1A |
0.999 |
0.970 |
Bond Angles for BBY
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
118.2 |
120.0 |
C1 |
C2 |
C3 |
122.4 |
119.9 |
C1 |
C2 |
C10 |
119.9 |
120.1 |
C2 |
C1 |
H1 |
120.9 |
120.0 |
C1 |
C6 |
C5 |
120.8 |
119.9 |
C1 |
C6 |
O7 |
132.0 |
131.4 |
C6 |
C1 |
H1 |
120.9 |
120.0 |
C3 |
C2 |
C10 |
117.6 |
120.1 |
C2 |
C3 |
C4 |
122.0 |
120.0 |
C2 |
C3 |
H3 |
119.0 |
120.0 |
C2 |
C10 |
N11 |
126.6 |
126.3 |
C2 |
C10 |
C14 |
126.1 |
126.3 |
C3 |
C4 |
C5 |
116.6 |
120.2 |
C3 |
C4 |
BR15 |
121.6 |
119.9 |
C4 |
C3 |
H3 |
119.0 |
120.0 |
C5 |
C4 |
BR15 |
121.8 |
119.9 |
C4 |
C5 |
C6 |
120.0 |
120.1 |
C4 |
C5 |
O9 |
131.2 |
131.3 |
C6 |
C5 |
O9 |
108.9 |
108.6 |
C5 |
C6 |
O7 |
107.2 |
108.6 |
C5 |
O9 |
C8 |
107.9 |
105.5 |
C6 |
O7 |
C8 |
108.4 |
105.5 |
O7 |
C8 |
O9 |
105.6 |
103.7 |
O7 |
C8 |
H8 |
110.8 |
110.5 |
O7 |
C8 |
H8A |
110.8 |
110.6 |
O9 |
C8 |
H8 |
110.8 |
110.6 |
O9 |
C8 |
H8A |
110.8 |
110.6 |
N11 |
C10 |
C14 |
107.3 |
107.4 |
C10 |
N11 |
N12 |
112.4 |
107.9 |
C10 |
N11 |
C16 |
133.4 |
126.1 |
C10 |
C14 |
C13 |
103.9 |
107.8 |
C10 |
C14 |
H14 |
128.1 |
126.1 |
N12 |
N11 |
C16 |
114.2 |
126.1 |
N11 |
N12 |
C13 |
101.4 |
108.5 |
N11 |
C16 |
H16 |
109.5 |
109.5 |
N11 |
C16 |
H16A |
109.5 |
109.4 |
N11 |
C16 |
H16B |
109.5 |
109.5 |
N12 |
C13 |
C14 |
114.9 |
108.5 |
N12 |
C13 |
N17 |
122.7 |
125.8 |
C14 |
C13 |
N17 |
122.4 |
125.8 |
C13 |
C14 |
H14 |
128.0 |
126.1 |
C13 |
N17 |
HN17 |
109.5 |
120.0 |
C13 |
N17 |
HN1A |
109.5 |
120.0 |
H8 |
C8 |
H8A |
108.1 |
110.6 |
H16 |
C16 |
H16A |
109.5 |
109.4 |
H16 |
C16 |
H16B |
109.5 |
109.5 |
H16A |
C16 |
H16B |
109.5 |
109.5 |
HN17 |
N17 |
HN1A |
109.5 |
119.9 |
Torsion Angles for BBY
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
C5 |
0.3 |
359.9 |
C2 |
C1 |
C6 |
O7 |
179.4 |
180.0 |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
C3 |
C2 |
C1 |
C10 |
180.4 |
180.1 |
C1 |
C2 |
C3 |
C4 |
359.6 |
360.0 |
C1 |
C2 |
C3 |
H3 |
179.6 |
180.0 |
C1 |
C2 |
C10 |
N11 |
209.1 |
339.3 |
C1 |
C2 |
C10 |
C14 |
28.8 |
158.9 |
C6 |
C1 |
C2 |
C3 |
0.0 |
0.1 |
C6 |
C1 |
C2 |
C10 |
179.6 |
180.0 |
C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
C4 |
C5 |
C6 |
C1 |
359.8 |
0.0 |
C1 |
C6 |
C5 |
O9 |
179.6 |
180.0 |
C5 |
C6 |
C1 |
O7 |
180.9 |
179.9 |
C1 |
C6 |
O7 |
C8 |
189.3 |
197.3 |
C3 |
C2 |
C1 |
C6 |
0.0 |
0.1 |
C1 |
C2 |
C3 |
C10 |
179.6 |
179.9 |
C3 |
C2 |
C1 |
H1 |
180.0 |
179.8 |
C3 |
C2 |
C10 |
N11 |
28.7 |
159.2 |
C3 |
C2 |
C10 |
C14 |
208.4 |
338.8 |
C2 |
C3 |
C4 |
C5 |
0.5 |
0.0 |
C2 |
C3 |
C4 |
BR15 |
179.8 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C10 |
C2 |
C1 |
C6 |
179.6 |
180.0 |
C1 |
C2 |
C10 |
C3 |
180.4 |
180.1 |
C10 |
C2 |
C1 |
H1 |
359.6 |
359.7 |
C10 |
C2 |
C3 |
C4 |
180.0 |
180.0 |
C10 |
C2 |
C3 |
H3 |
360.0 |
0.1 |
N11 |
C10 |
C2 |
C14 |
180.3 |
180.4 |
C2 |
C10 |
N11 |
N12 |
180.1 |
179.9 |
C2 |
C10 |
N11 |
C16 |
359.6 |
359.9 |
C2 |
C10 |
C14 |
C13 |
179.9 |
179.9 |
C2 |
C10 |
C14 |
H14 |
359.9 |
0.2 |
C4 |
C3 |
C2 |
C10 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
BR15 |
180.6 |
180.0 |
C3 |
C4 |
C5 |
C6 |
359.8 |
360.0 |
C3 |
C4 |
C5 |
O9 |
180.1 |
180.0 |
C1 |
C6 |
C5 |
C4 |
359.8 |
0.0 |
C3 |
C4 |
C5 |
BR15 |
179.4 |
180.0 |
C5 |
C4 |
C3 |
H3 |
180.5 |
180.0 |
C6 |
C5 |
C4 |
O9 |
179.7 |
180.0 |
C4 |
C5 |
C6 |
O7 |
180.5 |
180.0 |
C4 |
C5 |
O9 |
C8 |
170.8 |
162.7 |
C3 |
C4 |
BR15 |
C5 |
180.7 |
180.0 |
BR15 |
C4 |
C3 |
H3 |
359.8 |
360.0 |
BR15 |
C4 |
C5 |
C6 |
180.5 |
180.0 |
BR15 |
C4 |
C5 |
O9 |
0.7 |
360.0 |
C1 |
C6 |
C5 |
O7 |
179.3 |
180.1 |
C5 |
C6 |
C1 |
H1 |
180.3 |
180.2 |
C6 |
C5 |
C4 |
BR15 |
180.5 |
180.0 |
C4 |
C5 |
C6 |
O9 |
180.2 |
180.0 |
C6 |
C5 |
O9 |
C8 |
351.0 |
342.7 |
C5 |
C6 |
O7 |
C8 |
8.5 |
17.3 |
O9 |
C5 |
C4 |
BR15 |
0.7 |
360.0 |
C4 |
C5 |
O9 |
C6 |
179.8 |
180.0 |
O9 |
C5 |
C6 |
O7 |
0.3 |
360.0 |
O7 |
C8 |
O9 |
C5 |
13.9 |
27.2 |
C5 |
O9 |
C8 |
H8 |
253.9 |
268.7 |
C5 |
O9 |
C8 |
H8A |
133.9 |
145.8 |
C1 |
C6 |
O7 |
C5 |
180.8 |
179.9 |
O7 |
C6 |
C1 |
H1 |
359.4 |
0.3 |
O7 |
C6 |
C5 |
O9 |
0.3 |
360.0 |
C6 |
O7 |
C8 |
O9 |
346.2 |
332.8 |
C6 |
O7 |
C8 |
H8 |
106.2 |
91.4 |
C6 |
O7 |
C8 |
H8A |
226.2 |
214.2 |
C5 |
O9 |
C8 |
O7 |
13.9 |
27.2 |
O9 |
C8 |
O7 |
H8 |
240.0 |
241.4 |
O9 |
C8 |
O7 |
H8A |
120.0 |
118.6 |
H8 |
C8 |
O7 |
H8A |
240.0 |
237.2 |
O7 |
C8 |
O9 |
H8 |
120.0 |
118.5 |
O7 |
C8 |
O9 |
H8A |
240.0 |
241.4 |
H8 |
C8 |
O9 |
H8A |
120.0 |
122.9 |
C2 |
C10 |
N11 |
C14 |
179.7 |
179.7 |
N11 |
C10 |
C14 |
C13 |
359.6 |
359.6 |
N11 |
C10 |
C14 |
H14 |
179.6 |
179.8 |
N12 |
N11 |
C10 |
C16 |
180.5 |
180.0 |
C10 |
N11 |
N12 |
C13 |
359.8 |
0.0 |
C10 |
N11 |
C16 |
H16 |
180.5 |
84.1 |
C10 |
N11 |
C16 |
H16A |
300.5 |
204.0 |
C10 |
N11 |
C16 |
H16B |
60.5 |
324.1 |
C2 |
C10 |
C14 |
N11 |
180.3 |
180.3 |
C14 |
C10 |
N11 |
N12 |
0.4 |
0.2 |
C14 |
C10 |
N11 |
C16 |
179.9 |
180.2 |
N12 |
C13 |
C14 |
C10 |
0.2 |
0.4 |
C10 |
C14 |
C13 |
N17 |
180.3 |
180.2 |
C13 |
C14 |
C10 |
H14 |
180.0 |
179.8 |
N12 |
N11 |
C10 |
C14 |
0.4 |
0.2 |
C10 |
N11 |
N12 |
C16 |
179.6 |
180.0 |
N12 |
N11 |
C16 |
H16 |
0.0 |
264.1 |
N12 |
N11 |
C16 |
H16A |
120.0 |
24.0 |
N12 |
N11 |
C16 |
H16B |
240.0 |
144.1 |
N11 |
N12 |
C13 |
C14 |
360.0 |
359.8 |
N11 |
N12 |
C13 |
N17 |
179.9 |
179.9 |
C16 |
N11 |
C10 |
C14 |
179.9 |
180.2 |
C10 |
N11 |
C16 |
N12 |
180.5 |
180.0 |
C16 |
N11 |
N12 |
C13 |
180.1 |
180.0 |
H16 |
C16 |
N11 |
H16A |
240.0 |
240.1 |
H16 |
C16 |
N11 |
H16B |
120.0 |
120.0 |
H16A |
C16 |
N11 |
H16B |
240.0 |
239.9 |
C10 |
C14 |
C13 |
N12 |
0.2 |
0.4 |
C13 |
N12 |
N11 |
C16 |
180.1 |
180.0 |
C14 |
C13 |
N12 |
N17 |
180.0 |
179.8 |
N12 |
C13 |
C14 |
H14 |
180.2 |
180.2 |
N12 |
C13 |
N17 |
HN17 |
360.0 |
0.1 |
N12 |
C13 |
N17 |
HN1A |
120.0 |
180.0 |
C10 |
C14 |
C13 |
H14 |
180.0 |
180.2 |
N12 |
C13 |
C14 |
N17 |
180.0 |
180.2 |
C14 |
C13 |
N17 |
HN17 |
179.9 |
180.3 |
C14 |
C13 |
N17 |
HN1A |
300.0 |
0.2 |
N12 |
C13 |
N17 |
C14 |
180.1 |
179.8 |
N17 |
C13 |
C14 |
H14 |
0.3 |
0.0 |
HN17 |
N17 |
C13 |
HN1A |
240.0 |
180.0 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.3 |
H1 |
C1 |
C2 |
C3 |
180.0 |
179.8 |
H1 |
C1 |
C2 |
C10 |
359.6 |
359.7 |
H1 |
C1 |
C6 |
C5 |
180.3 |
180.2 |
H1 |
C1 |
C6 |
O7 |
359.4 |
0.3 |
H3 |
C3 |
C2 |
C10 |
360.0 |
0.1 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
C5 |
180.5 |
180.0 |
H3 |
C3 |
C4 |
BR15 |
359.8 |
360.0 |
O7 |
C8 |
H8 |
O9 |
243.2 |
245.7 |
O7 |
C8 |
H8 |
H8A |
121.6 |
122.8 |
O9 |
C8 |
H8 |
H8A |
238.4 |
237.1 |
O7 |
C8 |
H8A |
O9 |
116.8 |
114.3 |
O7 |
C8 |
H8A |
H8 |
238.4 |
237.2 |
O9 |
C8 |
H8A |
H8 |
121.6 |
122.9 |
C10 |
C14 |
H14 |
C13 |
180.0 |
179.7 |
H14 |
C14 |
C13 |
N17 |
0.3 |
0.0 |
N11 |
C16 |
H16 |
H16A |
120.0 |
119.9 |
N11 |
C16 |
H16 |
H16B |
240.0 |
240.0 |
H16A |
C16 |
H16 |
H16B |
120.0 |
120.0 |
N11 |
C16 |
H16A |
H16 |
240.0 |
240.1 |
N11 |
C16 |
H16A |
H16B |
120.0 |
120.1 |
H16 |
C16 |
H16A |
H16B |
240.0 |
240.0 |
N11 |
C16 |
H16B |
H16 |
120.0 |
120.0 |
N11 |
C16 |
H16B |
H16A |
240.0 |
240.0 |
H16 |
C16 |
H16B |
H16A |
120.0 |
120.0 |
C13 |
N17 |
HN17 |
HN1A |
120.0 |
180.0 |
C13 |
N17 |
HN1A |
HN17 |
239.9 |
180.0 |