PDB Chemical Component BBM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BBM
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C7 |
1.219 |
1.216 |
C7 |
N2 |
1.332 |
1.348 |
C7 |
C8 |
1.504 |
1.472 |
N2 |
O4 |
1.439 |
1.416 |
N2 |
HN2 |
1.020 |
0.971 |
O4 |
C15 |
1.429 |
1.430 |
C15 |
C16 |
1.529 |
1.530 |
C15 |
H151 |
1.115 |
1.090 |
C15 |
H152 |
1.115 |
1.090 |
C16 |
C17 |
1.528 |
1.531 |
C16 |
O2 |
1.436 |
1.429 |
C16 |
H16 |
1.115 |
1.090 |
C17 |
O3 |
1.433 |
1.428 |
C17 |
H171 |
1.115 |
1.090 |
C17 |
H172 |
1.115 |
1.090 |
O3 |
HO3 |
0.950 |
0.967 |
O2 |
HO2 |
0.950 |
0.968 |
C8 |
C9 |
1.390 |
1.398 |
C8 |
C13 |
1.493 |
1.404 |
C9 |
C10 |
1.391 |
1.377 |
C9 |
H9 |
1.103 |
1.080 |
C10 |
BR |
1.877 |
1.891 |
C10 |
C11 |
1.482 |
1.390 |
C11 |
F1 |
1.344 |
1.351 |
C11 |
C12 |
1.471 |
1.383 |
C12 |
F2 |
1.341 |
1.351 |
C12 |
C13 |
1.490 |
1.390 |
C13 |
N |
1.351 |
1.392 |
N |
C3 |
1.358 |
1.399 |
N |
HN |
1.020 |
0.969 |
C3 |
C26 |
1.478 |
1.391 |
C3 |
C4 |
1.399 |
1.388 |
C26 |
F3 |
1.345 |
1.351 |
C26 |
C1 |
1.386 |
1.383 |
C4 |
C5 |
1.386 |
1.381 |
C4 |
H4 |
1.103 |
1.080 |
C5 |
C6 |
1.389 |
1.384 |
C5 |
H5 |
1.103 |
1.080 |
C6 |
I |
2.083 |
2.094 |
C6 |
C1 |
1.390 |
1.383 |
C1 |
H1 |
1.103 |
1.080 |
Bond Angles for BBM
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C7 |
N2 |
120.5 |
120.0 |
O1 |
C7 |
C8 |
118.1 |
120.1 |
N2 |
C7 |
C8 |
121.4 |
120.0 |
C7 |
N2 |
O4 |
119.0 |
120.0 |
C7 |
N2 |
HN2 |
116.8 |
120.0 |
C7 |
C8 |
C9 |
119.4 |
120.2 |
C7 |
C8 |
C13 |
120.7 |
120.2 |
O4 |
N2 |
HN2 |
124.2 |
120.0 |
N2 |
O4 |
C15 |
121.3 |
106.8 |
O4 |
C15 |
C16 |
111.2 |
109.4 |
O4 |
C15 |
H151 |
111.6 |
109.5 |
O4 |
C15 |
H152 |
111.6 |
109.5 |
C16 |
C15 |
H151 |
111.6 |
109.5 |
C16 |
C15 |
H152 |
111.6 |
109.5 |
C15 |
C16 |
C17 |
109.2 |
109.4 |
C15 |
C16 |
O2 |
111.1 |
109.5 |
C15 |
C16 |
H16 |
108.8 |
109.5 |
H151 |
C15 |
H152 |
98.8 |
109.4 |
C17 |
C16 |
O2 |
110.0 |
109.5 |
C17 |
C16 |
H16 |
109.9 |
109.5 |
C16 |
C17 |
O3 |
110.2 |
109.4 |
C16 |
C17 |
H171 |
111.9 |
109.5 |
C16 |
C17 |
H172 |
111.9 |
109.4 |
O2 |
C16 |
H16 |
108.0 |
109.5 |
C16 |
O2 |
HO2 |
111.1 |
106.8 |
O3 |
C17 |
H171 |
111.9 |
109.5 |
O3 |
C17 |
H172 |
111.9 |
109.5 |
C17 |
O3 |
HO3 |
110.2 |
106.8 |
H171 |
C17 |
H172 |
98.5 |
109.5 |
C9 |
C8 |
C13 |
119.9 |
119.6 |
C8 |
C9 |
C10 |
121.7 |
120.0 |
C8 |
C9 |
H9 |
119.1 |
120.0 |
C8 |
C13 |
C12 |
119.7 |
119.7 |
C8 |
C13 |
N |
119.2 |
120.1 |
C10 |
C9 |
H9 |
119.2 |
120.0 |
C9 |
C10 |
BR |
118.8 |
119.9 |
C9 |
C10 |
C11 |
122.6 |
120.3 |
BR |
C10 |
C11 |
118.6 |
119.8 |
C10 |
C11 |
F1 |
121.2 |
119.8 |
C10 |
C11 |
C12 |
118.1 |
120.4 |
F1 |
C11 |
C12 |
120.7 |
119.8 |
C11 |
C12 |
F2 |
119.1 |
120.0 |
C11 |
C12 |
C13 |
118.0 |
120.0 |
F2 |
C12 |
C13 |
122.9 |
120.0 |
C12 |
C13 |
N |
121.1 |
120.2 |
C13 |
N |
C3 |
124.6 |
120.0 |
C13 |
N |
HN |
106.9 |
120.0 |
C3 |
N |
HN |
106.9 |
120.1 |
N |
C3 |
C26 |
116.8 |
120.0 |
N |
C3 |
C4 |
124.8 |
120.1 |
C26 |
C3 |
C4 |
118.4 |
119.9 |
C3 |
C26 |
F3 |
119.5 |
120.1 |
C3 |
C26 |
C1 |
119.1 |
119.9 |
C3 |
C4 |
C5 |
120.5 |
119.9 |
C3 |
C4 |
H4 |
120.2 |
120.0 |
F3 |
C26 |
C1 |
121.4 |
120.1 |
C26 |
C1 |
C6 |
119.9 |
120.1 |
C26 |
C1 |
H1 |
119.9 |
120.0 |
C5 |
C4 |
H4 |
119.2 |
120.0 |
C4 |
C5 |
C6 |
120.5 |
120.1 |
C4 |
C5 |
H5 |
119.7 |
120.0 |
C6 |
C5 |
H5 |
119.9 |
119.9 |
C5 |
C6 |
I |
118.9 |
120.0 |
C5 |
C6 |
C1 |
121.5 |
120.1 |
I |
C6 |
C1 |
119.6 |
119.9 |
C6 |
C1 |
H1 |
120.1 |
120.0 |
Torsion Angles for BBM
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N2 |
C7 |
O1 |
C8 |
177.9 |
180.0 |
O1 |
C7 |
N2 |
O4 |
347.7 |
360.0 |
O1 |
C7 |
N2 |
HN2 |
167.7 |
180.0 |
O1 |
C7 |
C8 |
C9 |
144.5 |
174.8 |
O1 |
C7 |
C8 |
C13 |
325.8 |
354.6 |
O1 |
C7 |
N2 |
C8 |
182.2 |
180.0 |
N2 |
C7 |
C8 |
C9 |
326.6 |
354.8 |
N2 |
C7 |
C8 |
C13 |
147.9 |
174.6 |
O4 |
N2 |
C7 |
HN2 |
180.0 |
180.0 |
C7 |
N2 |
O4 |
C15 |
245.9 |
180.0 |
O1 |
C7 |
C8 |
N2 |
177.9 |
180.0 |
C8 |
C7 |
N2 |
O4 |
165.6 |
180.0 |
C8 |
C7 |
N2 |
HN2 |
345.6 |
0.0 |
C9 |
C8 |
C7 |
C13 |
178.7 |
180.3 |
C7 |
C8 |
C9 |
C10 |
180.8 |
180.0 |
C7 |
C8 |
C9 |
H9 |
0.8 |
360.0 |
C7 |
C8 |
C13 |
C12 |
178.6 |
179.7 |
C7 |
C8 |
C13 |
N |
358.9 |
0.2 |
O4 |
N2 |
C7 |
C8 |
165.6 |
180.0 |
C7 |
N2 |
O4 |
HN2 |
180.0 |
180.0 |
N2 |
O4 |
C15 |
C16 |
111.0 |
180.0 |
N2 |
O4 |
C15 |
H151 |
345.7 |
60.0 |
N2 |
O4 |
C15 |
H152 |
236.2 |
300.1 |
HN2 |
N2 |
C7 |
C8 |
345.6 |
0.0 |
C7 |
N2 |
HN2 |
O4 |
180.0 |
180.0 |
HN2 |
N2 |
O4 |
C15 |
66.0 |
360.0 |
C15 |
O4 |
N2 |
HN2 |
66.0 |
360.0 |
C16 |
C15 |
O4 |
H151 |
125.3 |
120.0 |
C16 |
C15 |
O4 |
H152 |
234.8 |
239.9 |
O4 |
C15 |
C16 |
C17 |
164.9 |
185.0 |
O4 |
C15 |
C16 |
O2 |
43.4 |
65.0 |
O4 |
C15 |
C16 |
H16 |
284.7 |
305.0 |
H151 |
C15 |
O4 |
H152 |
109.5 |
119.9 |
O4 |
C15 |
C16 |
H151 |
234.7 |
240.0 |
O4 |
C15 |
C16 |
H152 |
125.3 |
120.0 |
H151 |
C15 |
C16 |
H152 |
250.5 |
240.0 |
C17 |
C16 |
C15 |
O2 |
121.4 |
120.0 |
C17 |
C16 |
C15 |
H16 |
240.1 |
240.0 |
C15 |
C16 |
C17 |
O3 |
279.4 |
175.0 |
C15 |
C16 |
C17 |
H171 |
154.1 |
55.0 |
C15 |
C16 |
C17 |
H172 |
44.6 |
295.0 |
O2 |
C16 |
C15 |
H16 |
118.7 |
120.0 |
C15 |
C16 |
O2 |
HO2 |
180.0 |
60.0 |
O4 |
C15 |
H151 |
C16 |
125.1 |
120.0 |
O4 |
C15 |
H151 |
H152 |
242.5 |
240.0 |
C16 |
C15 |
H151 |
H152 |
117.5 |
120.1 |
H151 |
C15 |
C16 |
C17 |
290.1 |
305.0 |
H151 |
C15 |
C16 |
O2 |
168.7 |
185.0 |
H151 |
C15 |
C16 |
H16 |
50.0 |
65.0 |
O4 |
C15 |
H152 |
C16 |
235.0 |
240.0 |
O4 |
C15 |
H152 |
H151 |
117.5 |
119.9 |
C16 |
C15 |
H152 |
H151 |
242.5 |
239.9 |
H152 |
C15 |
C16 |
C17 |
39.6 |
65.0 |
H152 |
C15 |
C16 |
O2 |
278.2 |
305.0 |
H152 |
C15 |
C16 |
H16 |
159.5 |
185.0 |
C17 |
C16 |
C15 |
H151 |
290.1 |
305.0 |
C17 |
C16 |
C15 |
H152 |
39.6 |
65.0 |
C15 |
C16 |
C17 |
O2 |
237.9 |
240.0 |
C15 |
C16 |
C17 |
H16 |
119.2 |
120.0 |
O2 |
C16 |
C17 |
H16 |
241.3 |
240.0 |
C17 |
C16 |
O2 |
HO2 |
59.0 |
300.0 |
O3 |
C17 |
C16 |
H171 |
125.2 |
120.0 |
O3 |
C17 |
C16 |
H172 |
234.7 |
240.0 |
C16 |
C17 |
O3 |
HO3 |
180.0 |
180.0 |
H171 |
C17 |
C16 |
H172 |
109.5 |
120.0 |
O2 |
C16 |
C15 |
H151 |
168.7 |
185.0 |
O2 |
C16 |
C15 |
H152 |
278.2 |
305.0 |
C15 |
C16 |
O2 |
C17 |
121.0 |
120.0 |
C15 |
C16 |
O2 |
H16 |
240.8 |
240.0 |
C17 |
C16 |
O2 |
H16 |
119.9 |
120.0 |
O2 |
C16 |
C17 |
O3 |
41.5 |
295.0 |
O2 |
C16 |
C17 |
H171 |
276.2 |
175.0 |
O2 |
C16 |
C17 |
H172 |
166.8 |
55.0 |
H16 |
C16 |
C15 |
H151 |
50.0 |
65.0 |
H16 |
C16 |
C15 |
H152 |
159.5 |
185.0 |
C15 |
C16 |
H16 |
C17 |
240.6 |
240.0 |
C15 |
C16 |
H16 |
O2 |
120.6 |
120.0 |
C17 |
C16 |
H16 |
O2 |
240.1 |
240.0 |
H16 |
C16 |
C17 |
O3 |
160.2 |
55.0 |
H16 |
C16 |
C17 |
H171 |
34.9 |
295.0 |
H16 |
C16 |
C17 |
H172 |
285.4 |
175.0 |
H16 |
C16 |
O2 |
HO2 |
299.2 |
180.0 |
O3 |
C17 |
C16 |
O2 |
41.5 |
295.0 |
O3 |
C17 |
C16 |
H16 |
160.2 |
55.0 |
C16 |
C17 |
O3 |
H171 |
234.8 |
240.0 |
C16 |
C17 |
O3 |
H172 |
125.3 |
120.0 |
H171 |
C17 |
O3 |
H172 |
250.5 |
240.0 |
H171 |
C17 |
C16 |
O2 |
276.2 |
175.0 |
H171 |
C17 |
C16 |
H16 |
34.9 |
295.0 |
C16 |
C17 |
H171 |
O3 |
124.3 |
120.0 |
C16 |
C17 |
H171 |
H172 |
242.2 |
240.1 |
O3 |
C17 |
H171 |
H172 |
117.8 |
120.1 |
H171 |
C17 |
O3 |
HO3 |
305.2 |
300.0 |
H172 |
C17 |
C16 |
O2 |
166.8 |
55.0 |
H172 |
C17 |
C16 |
H16 |
285.4 |
175.0 |
C16 |
C17 |
H172 |
O3 |
235.7 |
240.0 |
C16 |
C17 |
H172 |
H171 |
117.8 |
120.0 |
O3 |
C17 |
H172 |
H171 |
242.2 |
239.9 |
H172 |
C17 |
O3 |
HO3 |
54.7 |
60.0 |
HO3 |
O3 |
C17 |
H171 |
305.2 |
300.0 |
HO3 |
O3 |
C17 |
H172 |
54.7 |
60.0 |
HO2 |
O2 |
C16 |
H16 |
299.2 |
180.0 |
C7 |
C8 |
C9 |
C13 |
181.3 |
179.7 |
C9 |
C8 |
C13 |
C12 |
359.9 |
359.5 |
C9 |
C8 |
C13 |
N |
180.1 |
180.0 |
C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
C8 |
C9 |
C10 |
BR |
180.5 |
180.0 |
C8 |
C9 |
C10 |
C11 |
0.3 |
359.9 |
C7 |
C8 |
C13 |
C9 |
178.7 |
180.3 |
C13 |
C8 |
C9 |
C10 |
359.5 |
0.3 |
C13 |
C8 |
C9 |
H9 |
179.5 |
180.3 |
C11 |
C12 |
C13 |
C8 |
0.7 |
0.5 |
F2 |
C12 |
C13 |
C8 |
179.7 |
180.2 |
C12 |
C13 |
C8 |
N |
179.8 |
179.5 |
C8 |
C13 |
N |
C3 |
232.8 |
94.1 |
C8 |
C13 |
N |
HN |
107.6 |
274.1 |
C10 |
C9 |
C8 |
C13 |
359.5 |
0.3 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
BR |
C10 |
C9 |
C11 |
180.2 |
180.0 |
C9 |
C10 |
C11 |
F1 |
180.0 |
180.0 |
C9 |
C10 |
C11 |
C12 |
0.3 |
0.0 |
H9 |
C9 |
C8 |
C13 |
179.5 |
180.3 |
C8 |
C9 |
H9 |
C10 |
180.0 |
180.0 |
H9 |
C9 |
C10 |
BR |
0.5 |
0.0 |
H9 |
C9 |
C10 |
C11 |
180.3 |
180.0 |
BR |
C10 |
C9 |
H9 |
0.5 |
0.0 |
C9 |
C10 |
BR |
C11 |
179.8 |
180.0 |
BR |
C10 |
C11 |
F1 |
359.8 |
360.0 |
BR |
C10 |
C11 |
C12 |
180.1 |
180.0 |
C11 |
C10 |
C9 |
H9 |
180.3 |
180.0 |
C9 |
C10 |
C11 |
BR |
180.2 |
180.0 |
F1 |
C11 |
C10 |
C12 |
179.7 |
180.0 |
C10 |
C11 |
C12 |
F2 |
180.1 |
180.0 |
C10 |
C11 |
C12 |
C13 |
359.2 |
359.7 |
C10 |
C11 |
F1 |
C12 |
180.3 |
180.0 |
F1 |
C11 |
C12 |
F2 |
0.5 |
0.0 |
F1 |
C11 |
C12 |
C13 |
179.5 |
179.8 |
C8 |
C13 |
C12 |
C11 |
0.7 |
0.5 |
C10 |
C11 |
C12 |
F1 |
179.7 |
180.0 |
F2 |
C12 |
C11 |
C13 |
180.9 |
180.3 |
C11 |
C12 |
C13 |
N |
180.5 |
180.0 |
C8 |
C13 |
C12 |
F2 |
179.7 |
180.2 |
C11 |
C12 |
F2 |
C13 |
179.0 |
179.7 |
F2 |
C12 |
C13 |
N |
359.5 |
359.7 |
C8 |
C13 |
C12 |
N |
180.2 |
180.5 |
C11 |
C12 |
C13 |
F2 |
181.0 |
180.3 |
C12 |
C13 |
N |
C3 |
53.0 |
274.5 |
C12 |
C13 |
N |
HN |
287.8 |
94.6 |
C8 |
C13 |
N |
C12 |
179.8 |
179.5 |
C3 |
N |
C13 |
HN |
125.3 |
180.0 |
C13 |
N |
C3 |
C26 |
180.1 |
174.0 |
C13 |
N |
C3 |
C4 |
359.6 |
354.3 |
C13 |
N |
C3 |
HN |
234.8 |
180.0 |
C26 |
C3 |
N |
C4 |
180.5 |
179.8 |
N |
C3 |
C26 |
F3 |
359.5 |
0.2 |
N |
C3 |
C26 |
C1 |
179.5 |
179.8 |
N |
C3 |
C4 |
C5 |
180.7 |
180.0 |
N |
C3 |
C4 |
H4 |
0.7 |
360.0 |
C13 |
N |
HN |
C3 |
135.4 |
180.0 |
HN |
N |
C3 |
C26 |
305.3 |
354.0 |
HN |
N |
C3 |
C4 |
124.9 |
174.2 |
C26 |
C3 |
N |
HN |
305.3 |
354.0 |
N |
C3 |
C26 |
C4 |
179.6 |
180.2 |
C26 |
C3 |
C4 |
C5 |
0.2 |
0.2 |
C26 |
C3 |
C4 |
H4 |
180.2 |
180.2 |
F3 |
C26 |
C3 |
C1 |
180.0 |
180.4 |
C3 |
C26 |
C1 |
C6 |
360.0 |
0.4 |
C3 |
C26 |
C1 |
H1 |
180.0 |
180.2 |
C4 |
C3 |
N |
HN |
124.9 |
174.2 |
N |
C3 |
C4 |
C26 |
180.5 |
179.8 |
C4 |
C3 |
C26 |
F3 |
179.9 |
180.0 |
C4 |
C3 |
C26 |
C1 |
359.9 |
359.6 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
C6 |
359.8 |
0.0 |
C3 |
C4 |
C5 |
H5 |
179.8 |
180.0 |
F3 |
C26 |
C3 |
C4 |
179.9 |
180.0 |
C3 |
C26 |
F3 |
C1 |
180.0 |
179.6 |
F3 |
C26 |
C1 |
C6 |
179.9 |
180.0 |
F3 |
C26 |
C1 |
H1 |
359.9 |
359.8 |
C1 |
C26 |
C3 |
C4 |
359.9 |
359.6 |
C3 |
C26 |
C1 |
F3 |
180.0 |
180.4 |
C5 |
C6 |
C1 |
C26 |
0.1 |
359.9 |
I |
C6 |
C1 |
C26 |
180.1 |
179.8 |
C6 |
C1 |
C26 |
H1 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
I |
180.0 |
180.0 |
C4 |
C5 |
C6 |
C1 |
0.0 |
359.9 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
C6 |
179.8 |
180.1 |
H4 |
C4 |
C5 |
H5 |
359.8 |
0.1 |
C26 |
C1 |
C6 |
C5 |
0.1 |
359.9 |
C6 |
C5 |
C4 |
H4 |
179.8 |
180.1 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
I |
C6 |
C5 |
C1 |
180.0 |
180.1 |
C5 |
C6 |
C1 |
H1 |
180.1 |
180.0 |
H5 |
C5 |
C4 |
H4 |
359.8 |
0.1 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
I |
0.0 |
0.0 |
H5 |
C5 |
C6 |
C1 |
180.0 |
179.9 |
C26 |
C1 |
C6 |
I |
180.1 |
179.8 |
I |
C6 |
C5 |
H5 |
0.0 |
0.0 |
C5 |
C6 |
I |
C1 |
180.0 |
179.9 |
I |
C6 |
C1 |
H1 |
0.1 |
359.9 |
C26 |
C1 |
C6 |
H1 |
180.0 |
179.9 |
C1 |
C6 |
C5 |
H5 |
180.0 |
179.9 |
C5 |
C6 |
C1 |
I |
180.0 |
180.1 |
C26 |
C1 |
H1 |
C6 |
180.0 |
180.1 |