PDB Chemical Component BB8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BB8

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.491 1.470
CA C 1.527 1.507
CA CB 1.524 1.529
C OXT 1.316 1.342
CB OB 1.405 1.428
CB CG 1.569 1.507
CG CD1 1.468 1.381
CG CD2 1.441 1.383
CD1 CE1 1.433 1.383
CE1 CZ 1.427 1.382
CZ CE2 1.435 1.382
CE2 CD2 1.445 1.382
N HN1 1.000 1.009
N HA2 1.000 1.010
CA HA 1.100 1.090
C O 1.718 1.208
CB HB 1.100 1.090
OXT HXT 0.950 0.967
OB HC 0.950 0.967
CD1 HD1 1.080 1.080
CD2 HD2 1.080 1.080
CE1 HE1 1.080 1.080
CZ HZ 1.080 1.081
CE2 HE2 1.080 1.080

Bond Angles for BB8

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N CA C 105.6 109.4
N CA CB 108.0 109.5
CA N HN1 109.5 111.0
CA N HA2 109.5 110.9
N CA HA 113.9 109.5
C CA CB 112.1 109.5
CA C OXT 118.3 120.0
C CA HA 109.8 109.4
CA C O 126.3 120.0
CA CB OB 117.5 109.5
CA CB CG 109.6 109.5
CB CA HA 107.5 109.5
CA CB HB 105.3 109.5
O C OXT 115.5 120.0
C OXT HXT 109.5 117.0
OB CB CG 114.0 109.5
OB CB HB 99.8 109.4
CB OB HC 109.5 114.0
CB CG CD1 117.7 120.0
CB CG CD2 123.6 120.0
CG CB HB 109.5 109.5
CD1 CG CD2 118.6 120.0
CG CD1 CE1 120.9 120.0
CG CD1 HD1 119.6 120.0
CG CD2 CE2 119.9 120.0
CG CD2 HD2 120.1 120.0
CD1 CE1 CZ 119.5 119.9
CE1 CD1 HD1 119.5 119.9
CD1 CE1 HE1 120.3 120.0
CE1 CZ CE2 120.6 120.0
CZ CE1 HE1 120.3 120.0
CE1 CZ HZ 119.7 120.0
CZ CE2 CD2 120.5 120.0
CE2 CZ HZ 119.7 120.0
CZ CE2 HE2 119.8 120.0
CE2 CD2 HD2 120.1 120.0
CD2 CE2 HE2 119.8 120.0
HN1 N HA2 109.4 111.0

Torsion Angles for BB8

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C CA N CB 120.1 120.0
N CA C OXT 124.0 160.0
C CA N HA 239.4 240.1
N CA C O 304.0 339.9
N CA CB OB 156.4 180.0
N CA CB CG 288.7 300.0
CB CA N HA 119.3 120.1
N CA CB HB 46.5 60.0
HN1 N CA HA2 240.0 236.1
N CA C CB 242.7 240.0
C CA N HN1 337.2 296.1
C CA N HA2 97.2 60.0
N CA C HA 123.2 119.9
C CA CB OB 40.5 60.0
C CA CB CG 172.8 180.0
CB CA C HA 240.5 240.0
C CA CB HB 290.6 300.0
O C CA OXT 180.0 180.0
CA C OXT HXT 180.0 180.0
N CA CB C 115.9 120.0
CB CA N HN1 217.1 176.1
CB CA N HA2 337.1 300.0
N CA CB HA 236.7 240.0
CB CA C OXT 241.3 280.0
C CA CB HA 120.8 120.0
CB CA C O 61.3 100.0
OB CB CA CG 227.7 240.0
OB CB CA HB 110.0 120.0
CA CB OB HC 26.1 60.0
CA CB CG CD1 283.2 100.0
CA CB CG CD2 102.8 279.7
CG CB CA HB 242.2 240.0
OXT C CA CB 241.3 280.0
OXT C CA HA 0.8 40.0
CA C OXT O 180.0 180.0
CA CB OB CG 130.2 120.0
OB CB CA HA 279.7 300.0
CA CB OB HB 246.9 240.0
OB CB CG CD1 57.3 220.0
OB CB CG CD2 236.8 39.7
CG CB OB HB 116.7 120.0
CA CB CG OB 226.0 240.0
CG CB CA HA 52.0 60.1
CA CB CG HB 115.1 120.0
OB CB CG HB 249.1 240.0
CG CB OB HC 255.9 299.9
CD1 CG CB CD2 180.4 180.3
CB CG CD1 CE1 179.5 180.0
CB CG CD1 HD1 359.5 0.0
CB CG CD2 CE2 180.8 179.8
CB CG CD2 HD2 0.8 0.1
CB CG CD1 CD2 179.6 179.7
CD1 CG CB HB 168.1 340.0
CD1 CG CD2 CE2 0.4 359.5
CD1 CG CD2 HD2 180.4 179.8
CG CD1 CE1 CZ 359.7 360.0
CE1 CD1 CG HD1 180.0 180.0
CG CD1 CE1 HE1 179.7 180.0
CB CG CD2 CD1 180.4 180.3
CD2 CG CB HB 347.7 159.7
CD2 CG CD1 CE1 359.9 0.3
CD2 CG CD1 HD1 179.9 180.3
CZ CE2 CD2 CG 359.7 0.5
CE2 CD2 CG HD2 180.0 179.7
CG CD2 CE2 HE2 179.7 180.2
CE1 CD1 CG CD2 359.9 0.3
CG CD1 CE1 HD1 180.0 180.0
CD1 CE1 CZ CE2 0.4 0.0
CZ CE1 CD1 HE1 180.0 180.0
CD1 CE1 CZ HZ 180.4 180.0
CZ CE1 CD1 HD1 179.7 179.9
CD1 CE1 CZ HE1 180.0 180.0
CE1 CZ CE2 CD2 359.9 359.8
CE2 CZ CE1 HZ 180.0 180.0
CE1 CZ CE2 HE2 179.9 180.0
CG CD2 CE2 CZ 359.7 0.5
CE2 CZ CE1 HE1 180.5 180.0
CE1 CZ CE2 HZ 180.0 180.0
CZ CE2 CD2 HD2 179.7 180.2
CD2 CE2 CZ HE2 180.0 179.7
CG CD2 CE2 HD2 180.0 180.3
CD2 CE2 CZ HZ 179.9 179.8
CZ CE2 CD2 HE2 180.0 180.3
HN1 N CA C 337.2 296.1
HN1 N CA CB 217.1 176.1
CA N HN1 HA2 120.0 123.9
HN1 N CA HA 97.8 56.0
HA2 N CA C 97.2 60.0
HA2 N CA CB 337.1 300.0
CA N HA2 HN1 240.0 236.1
HA2 N CA HA 217.8 179.9
N CA HA C 241.8 240.1
N CA HA CB 119.6 120.1
HA CA N HN1 97.8 56.0
HA CA N HA2 217.8 179.9
C CA HA CB 237.7 240.0
HA CA C OXT 0.8 40.0
HA CA C O 180.8 220.0
HA CA CB OB 279.7 300.0
HA CA CB CG 52.0 60.1
HA CA CB HB 169.7 180.0
O C CA CB 61.3 100.0
CA C O OXT 180.0 180.0
O C CA HA 180.8 220.0
O C OXT HXT 360.0 0.0
CA CB HB OB 122.2 120.0
CA CB HB CG 242.2 240.0
HB CB CA HA 169.7 180.0
OB CB HB CG 120.0 120.0
HB CB OB HC 139.2 180.0
HB CB CG CD1 168.1 340.0
HB CB CG CD2 347.7 159.7
HC OB CB CG 255.9 299.9
HC OB CB HB 139.2 180.0
HD1 CD1 CG CD2 179.9 180.3
CG CD1 HD1 CE1 180.0 180.0
HD1 CD1 CE1 CZ 179.7 179.9
HD1 CD1 CE1 HE1 359.7 360.0
CG CD2 HD2 CE2 180.0 179.7
HD2 CD2 CE2 HE2 359.7 359.9
CD1 CE1 HE1 CZ 180.0 180.0
HE1 CE1 CD1 HD1 359.7 360.0
HE1 CE1 CZ CE2 180.5 180.0
HE1 CE1 CZ HZ 0.4 359.9
CE1 CZ HZ CE2 180.0 180.0
HZ CZ CE1 HE1 0.4 359.9
HZ CZ CE2 CD2 179.9 179.8
HZ CZ CE2 HE2 359.9 0.0
CZ CE2 HE2 CD2 180.0 179.7
HE2 CE2 CZ HZ 359.9 0.0
HE2 CE2 CD2 HD2 359.7 359.9