PDB Chemical Component BB1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BB1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	C3	1.522	1.530
C2	N1	1.451	1.464
C2	H21	1.115	1.090
C2	H22	1.115	1.090
C3	C4	1.497	1.506
C3	C7	1.554	1.529
C3	H3	1.115	1.090
C4	O3	1.232	1.212
C4	N2	1.344	1.347
N2	C5	1.434	1.465
N2	HN2	1.020	0.970
C5	C6	1.518	1.506
C5	C11	1.530	1.529
C5	H5	1.116	1.091
C7	C8	1.571	1.529
C7	H71	1.115	1.091
C7	H72	1.115	1.091
C8	C9	1.546	1.530
C8	H81	1.115	1.091
C8	H82	1.115	1.090
C9	C10	1.524	1.529
C9	H91	1.115	1.091
C9	H92	1.115	1.089
C10	H101	1.115	1.091
C10	H102	1.115	1.090
C10	H103	1.114	1.090
N1	C1	1.329	1.347
N1	O2	1.335	1.416
C1	O1	1.234	1.212
C1	H1	1.103	1.080
O2	H2	0.950	0.967
C6	N3	1.346	1.347
C6	O4	1.233	1.213
N3	C16	1.460	1.465
N3	C15	1.455	1.465
C16	H161	1.115	1.090
C16	H162	1.114	1.091
C16	H163	1.114	1.090
C15	H151	1.115	1.089
C15	H152	1.115	1.089
C15	H153	1.115	1.090
C11	C12	1.536	1.530
C11	C13	1.545	1.530
C11	C14	1.528	1.530
C12	H121	1.116	1.090
C12	H122	1.114	1.090
C12	H123	1.115	1.090
C13	H131	1.116	1.090
C13	H132	1.115	1.090
C13	H133	1.114	1.089
C14	H141	1.116	1.090
C14	H142	1.116	1.090
C14	H143	1.115	1.090

Bond Angles for BB1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	C2	N1	110.7	109.5
C3	C2	H21	111.8	109.5
C3	C2	H22	111.8	109.4
C2	C3	C4	111.4	109.5
C2	C3	C7	114.9	109.5
C2	C3	H3	105.2	109.4
N1	C2	H21	111.8	109.5
N1	C2	H22	111.8	109.5
C2	N1	C1	120.2	120.0
C2	N1	O2	125.8	120.0
H21	C2	H22	98.6	109.5
C4	C3	C7	112.4	109.5
C4	C3	H3	108.1	109.5
C3	C4	O3	119.5	120.0
C3	C4	N2	116.1	120.0
C7	C3	H3	104.1	109.4
C3	C7	C8	110.7	109.5
C3	C7	H71	111.7	109.4
C3	C7	H72	111.7	109.5
O3	C4	N2	124.0	120.0
C4	N2	C5	123.2	120.0
C4	N2	HN2	115.0	120.0
C5	N2	HN2	121.9	119.9
N2	C5	C6	104.6	109.5
N2	C5	C11	115.9	109.5
N2	C5	H5	110.1	109.4
C6	C5	C11	113.7	109.5
C6	C5	H5	112.5	109.5
C5	C6	N3	126.9	120.1
C5	C6	O4	114.2	120.0
C11	C5	H5	100.2	109.5
C5	C11	C12	109.1	109.5
C5	C11	C13	111.5	109.5
C5	C11	C14	109.3	109.5
C8	C7	H71	111.8	109.4
C8	C7	H72	111.7	109.5
C7	C8	C9	110.4	109.5
C7	C8	H81	111.8	109.4
C7	C8	H82	111.8	109.5
H71	C7	H72	98.6	109.4
C9	C8	H81	111.9	109.4
C9	C8	H82	111.9	109.5
C8	C9	C10	111.5	109.5
C8	C9	H91	111.4	109.4
C8	C9	H92	111.4	109.5
H81	C8	H82	98.5	109.4
C10	C9	H91	111.5	109.5
C10	C9	H92	111.5	109.5
C9	C10	H101	111.5	109.5
C9	C10	H102	111.4	109.5
C9	C10	H103	111.4	109.4
H91	C9	H92	98.9	109.4
H101	C10	H102	111.5	109.5
H101	C10	H103	111.5	109.5
H102	C10	H103	98.9	109.5
C1	N1	O2	113.1	120.0
N1	C1	O1	121.1	120.0
N1	C1	H1	123.2	120.0
N1	O2	H2	125.8	106.8
O1	C1	H1	115.7	120.0
N3	C6	O4	118.9	120.0
C6	N3	C16	117.2	120.0
C6	N3	C15	122.3	120.0
C16	N3	C15	120.4	120.0
N3	C16	H161	117.2	109.5
N3	C16	H162	109.4	109.5
N3	C16	H163	109.4	109.5
N3	C15	H151	122.3	109.4
N3	C15	H152	107.7	109.5
N3	C15	H153	107.7	109.4
H161	C16	H162	109.4	109.4
H161	C16	H163	109.4	109.5
H162	C16	H163	100.8	109.5
H151	C15	H152	107.6	109.6
H151	C15	H153	107.7	109.5
H152	C15	H153	102.1	109.5
C12	C11	C13	108.8	109.5
C12	C11	C14	109.4	109.4
C11	C12	H121	109.1	109.5
C11	C12	H122	112.3	109.5
C11	C12	H123	112.3	109.5
C13	C11	C14	108.7	109.5
C11	C13	H131	111.5	109.5
C11	C13	H132	111.4	109.5
C11	C13	H133	111.4	109.5
C11	C14	H141	109.4	109.5
C11	C14	H142	112.3	109.5
C11	C14	H143	112.3	109.4
H121	C12	H122	112.4	109.5
H121	C12	H123	112.3	109.5
H122	C12	H123	98.1	109.5
H131	C13	H132	111.4	109.4
H131	C13	H133	111.5	109.5
H132	C13	H133	99.0	109.5
H141	C14	H142	112.2	109.5
H141	C14	H143	112.2	109.4
H142	C14	H143	98.1	109.5

Torsion Angles for BB1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N1	C2	C3	H21	234.7	239.9
N1	C2	C3	H22	125.3	120.0
C3	C2	N1	C1	266.8	74.1
C3	C2	N1	O2	75.5	254.1
H21	C2	C3	H22	250.6	240.1
C4	C3	C2	C7	129.2	120.1
C4	C3	C2	H3	243.1	240.0
C2	C3	C4	O3	311.0	239.9
C2	C3	C4	N2	137.8	59.9
C7	C3	C2	H3	113.8	119.9
C2	C3	C7	C8	188.5	186.8
C2	C3	C7	H71	313.8	66.8
C2	C3	C7	H72	63.2	306.9
C3	C2	N1	H21	125.3	120.0
C3	C2	N1	H22	234.7	240.1
N1	C2	C3	C4	194.5	185.4
N1	C2	C3	C7	65.3	65.2
N1	C2	C3	H3	311.4	305.4
H21	C2	N1	H22	109.4	120.0
C1	N1	C2	O2	191.3	180.0
C2	N1	C1	O1	173.3	180.0
C2	N1	C1	H1	353.3	359.9
C2	N1	O2	H2	179.9	180.0
C3	C2	H21	N1	235.3	239.9
C3	C2	H21	H22	117.7	119.8
H21	C2	C3	C4	319.8	305.5
H21	C2	C3	C7	190.5	185.3
H21	C2	C3	H3	76.7	65.5
N1	C2	H21	H22	242.3	239.9
H21	C2	N1	C1	141.5	314.0
H21	C2	N1	O2	310.2	134.0
C3	C2	H22	N1	124.7	120.0
C3	C2	H22	H21	242.3	240.1
H22	C2	C3	C4	69.2	65.4
H22	C2	C3	C7	300.0	305.2
H22	C2	C3	H3	186.1	185.4
N1	C2	H22	H21	117.6	120.1
H22	C2	N1	C1	32.1	194.0
H22	C2	N1	O2	200.8	14.0
C4	C3	C2	N1	194.5	185.4
C4	C3	C2	H21	319.8	305.5
C4	C3	C2	H22	69.2	65.4
C2	C3	C4	C7	229.4	239.9
C2	C3	C4	H3	115.1	119.9
C7	C3	C4	H3	245.7	240.0
C4	C3	C7	C8	59.7	66.7
C4	C3	C7	H71	185.0	306.7
C4	C3	C7	H72	294.4	186.8
O3	C4	C3	N2	173.2	180.0
C3	C4	N2	C5	173.1	180.0
C3	C4	N2	HN2	353.1	0.1
C7	C3	C2	N1	65.3	65.2
C7	C3	C2	H21	190.5	185.3
C7	C3	C2	H22	300.0	305.2
C2	C3	C7	C4	128.7	120.1
C2	C3	C7	H3	245.5	240.1
C4	C3	C7	H3	116.8	120.0
C7	C3	C4	O3	81.5	0.0
C7	C3	C4	N2	268.3	180.0
C8	C7	C3	H71	234.7	120.0
C8	C7	C3	H72	125.3	239.9
C3	C7	C8	C9	198.3	174.8
C3	C7	C8	H81	323.5	54.9
C3	C7	C8	H82	73.0	294.9
H71	C7	C3	H72	250.6	120.0
H3	C3	C2	N1	311.4	305.4
H3	C3	C2	H21	76.7	65.5
H3	C3	C2	H22	186.1	185.4
C2	C3	H3	C4	240.9	240.0
C2	C3	H3	C7	121.2	119.9
C4	C3	H3	C7	240.3	239.9
H3	C3	C4	O3	195.9	120.0
H3	C3	C4	N2	22.6	300.0
H3	C3	C7	C8	302.9	306.7
H3	C3	C7	H71	68.2	186.7
H3	C3	C7	H72	177.7	66.8
O3	C4	C3	C7	81.5	0.0
O3	C4	C3	H3	195.9	120.0
C3	C4	O3	N2	187.4	180.0
O3	C4	N2	C5	0.3	360.0
O3	C4	N2	HN2	180.2	180.1
N2	C4	C3	C7	268.3	180.0
N2	C4	C3	H3	22.6	300.0
C3	C4	N2	O3	172.9	180.0
C5	N2	C4	HN2	180.0	179.9
C4	N2	C5	C6	228.5	210.0
C4	N2	C5	C11	102.5	90.0
C4	N2	C5	H5	349.6	330.0
C4	N2	C5	HN2	180.0	180.1
C6	C5	N2	C11	126.1	120.1
C6	C5	N2	H5	238.9	240.0
N2	C5	C6	N3	126.0	148.2
N2	C5	C6	O4	308.7	328.3
C11	C5	N2	H5	112.8	120.0
N2	C5	C11	C12	179.8	60.8
N2	C5	C11	C13	59.6	180.7
N2	C5	C11	C14	299.4	300.8
C4	N2	HN2	C5	180.0	179.9
HN2	N2	C5	C6	48.6	30.0
HN2	N2	C5	C11	282.5	269.9
HN2	N2	C5	H5	169.7	150.0
C6	C5	N2	HN2	48.6	30.0
N2	C5	C6	C11	232.6	240.0
N2	C5	C6	H5	119.5	120.0
C11	C5	C6	H5	246.9	240.0
C6	C5	C11	C12	58.5	300.7
C6	C5	C11	C13	298.3	60.7
C6	C5	C11	C14	178.1	180.7
N3	C6	C5	O4	177.2	179.9
C5	C6	N3	C16	180.6	177.4
C5	C6	N3	C15	2.0	357.4
C11	C5	N2	HN2	282.5	269.9
N2	C5	C11	C6	121.3	120.1
N2	C5	C11	H5	241.6	240.1
C6	C5	C11	H5	120.3	120.0
C11	C5	C6	N3	253.4	268.2
C11	C5	C6	O4	76.1	88.3
C12	C11	C5	C13	120.2	240.0
C12	C11	C5	C14	240.3	120.0
C5	C11	C12	H121	180.0	180.0
C5	C11	C12	H122	305.3	300.0
C5	C11	C12	H123	54.7	60.0
C13	C11	C5	C14	120.2	240.0
C5	C11	C13	H131	180.0	303.8
C5	C11	C13	H132	305.2	63.8
C5	C11	C13	H133	54.7	183.8
C5	C11	C14	H141	180.0	59.9
C5	C11	C14	H142	305.3	180.0
C5	C11	C14	H143	54.7	300.0
H5	C5	N2	HN2	169.7	150.0
N2	C5	H5	C6	243.7	240.0
N2	C5	H5	C11	122.6	120.0
C6	C5	H5	C11	238.9	240.0
H5	C5	C6	N3	6.4	28.2
H5	C5	C6	O4	189.2	208.3
H5	C5	C11	C12	298.2	180.7
H5	C5	C11	C13	178.0	300.7
H5	C5	C11	C14	57.9	60.7
C8	C7	C3	H3	302.9	306.7
C3	C7	C8	H71	125.3	240.1
C3	C7	C8	H72	234.7	120.1
H71	C7	C8	H72	109.5	240.0
C9	C8	C7	H81	234.7	119.9
C9	C8	C7	H82	125.3	239.9
C7	C8	C9	C10	202.1	180.0
C7	C8	C9	H91	327.4	60.1
C7	C8	C9	H92	76.8	300.2
H81	C8	C7	H82	250.6	120.0
H71	C7	C3	H3	68.2	186.7
C3	C7	H71	C8	235.3	120.0
C3	C7	H71	H72	117.6	240.0
C8	C7	H71	H72	242.3	120.0
H71	C7	C8	C9	73.0	294.8
H71	C7	C8	H81	198.3	174.8
H71	C7	C8	H82	307.7	54.9
H72	C7	C3	H3	177.7	66.8
C3	C7	H72	C8	124.7	239.9
C3	C7	H72	H71	242.4	119.9
C8	C7	H72	H71	117.7	240.0
H72	C7	C8	C9	323.5	54.7
H72	C7	C8	H81	88.8	294.8
H72	C7	C8	H82	198.3	174.8
C9	C8	C7	H71	73.0	294.8
C9	C8	C7	H72	323.5	54.7
C7	C8	C9	H81	125.2	240.1
C7	C8	C9	H82	234.8	120.1
H81	C8	C9	H82	109.5	240.1
C10	C9	C8	H91	234.7	120.0
C10	C9	C8	H92	125.3	239.9
C8	C9	C10	H101	180.0	180.1
C8	C9	C10	H102	305.3	300.0
C8	C9	C10	H103	54.7	60.0
H91	C9	C8	H92	250.6	119.9
H81	C8	C7	H71	198.3	174.8
H81	C8	C7	H72	88.8	294.8
C7	C8	H81	C9	235.6	120.0
C7	C8	H81	H82	117.7	240.0
C9	C8	H81	H82	242.1	120.0
H81	C8	C9	C10	76.8	300.0
H81	C8	C9	H91	202.2	180.0
H81	C8	C9	H92	311.6	60.1
H82	C8	C7	H71	307.7	54.9
H82	C8	C7	H72	198.3	174.8
C7	C8	H82	C9	124.4	239.9
C7	C8	H82	H81	242.3	119.9
C9	C8	H82	H81	117.8	240.1
H82	C8	C9	C10	327.3	59.9
H82	C8	C9	H91	92.6	299.9
H82	C8	C9	H92	202.0	180.1
C10	C9	C8	H81	76.8	300.0
C10	C9	C8	H82	327.3	59.9
C8	C9	C10	H91	125.3	240.0
C8	C9	C10	H92	234.7	120.1
H91	C9	C10	H92	109.4	240.1
H101	C10	C9	H102	234.8	240.0
H101	C10	C9	H103	125.3	120.0
H102	C10	C9	H103	250.5	240.0
H91	C9	C8	H81	202.2	180.0
H91	C9	C8	H82	92.6	299.9
C8	C9	H91	C10	234.6	120.0
C8	C9	H91	H92	117.3	240.0
C10	C9	H91	H92	242.6	120.0
H91	C9	C10	H101	54.7	300.0
H91	C9	C10	H102	180.0	60.0
H91	C9	C10	H103	289.4	180.0
H92	C9	C8	H81	311.6	60.1
H92	C9	C8	H82	202.0	180.1
C8	C9	H92	C10	125.3	239.9
C8	C9	H92	H91	242.7	119.9
C10	C9	H92	H91	117.4	240.0
H92	C9	C10	H101	305.3	59.9
H92	C9	C10	H102	70.5	179.9
H92	C9	C10	H103	180.0	299.9
H101	C10	C9	H91	54.7	300.0
H101	C10	C9	H92	305.3	59.9
C9	C10	H101	H102	125.2	120.0
C9	C10	H101	H103	234.8	240.0
H102	C10	H101	H103	109.5	120.0
H102	C10	C9	H91	180.0	60.0
H102	C10	C9	H92	70.5	179.9
C9	C10	H102	H101	234.7	240.0
C9	C10	H102	H103	117.3	120.0
H101	C10	H102	H103	242.6	240.0
H103	C10	C9	H91	289.4	180.0
H103	C10	C9	H92	180.0	299.9
C9	C10	H103	H101	125.3	120.0
C9	C10	H103	H102	242.7	240.0
H101	C10	H103	H102	117.4	120.0
C1	N1	C2	H21	141.5	314.0
C1	N1	C2	H22	32.1	194.0
C2	N1	C1	O2	170.1	180.0
C1	N1	O2	H2	349.3	360.0
O1	C1	N1	H1	180.0	180.0
O2	N1	C2	H21	310.2	134.0
O2	N1	C2	H22	200.8	14.0
C2	N1	O2	C1	190.6	180.0
O2	N1	C1	O1	3.2	360.0
O2	N1	C1	H1	183.2	180.0
O1	C1	N1	O2	3.2	360.0
N1	C1	O1	H1	180.0	180.0
H1	C1	N1	O2	183.2	180.0
N1	C1	H1	O1	180.0	180.0
N3	C6	C5	C11	253.4	268.2
N3	C6	C5	H5	6.4	28.2
C5	C6	N3	O4	182.9	180.1
C16	N3	C6	C15	178.6	180.0
C6	N3	C16	H161	180.0	180.1
C6	N3	C16	H162	305.2	300.0
C6	N3	C16	H163	54.7	60.0
C6	N3	C15	H151	180.0	5.4
C6	N3	C15	H152	305.3	125.5
C6	N3	C15	H153	54.7	245.5
O4	C6	C5	C11	76.1	88.3
O4	C6	C5	H5	189.2	208.3
C5	C6	O4	N3	177.5	179.9
O4	C6	N3	C16	357.7	357.3
O4	C6	N3	C15	179.1	177.3
C16	N3	C6	O4	357.7	357.3
C6	N3	C16	C15	181.4	180.0
C16	N3	C15	H151	1.5	185.5
C16	N3	C15	H152	126.8	305.6
C16	N3	C15	H153	236.1	65.5
H161	C16	N3	H162	234.7	240.1
H161	C16	N3	H163	125.2	120.0
H162	C16	N3	H163	250.5	240.0
C15	N3	C6	O4	179.1	177.3
C6	N3	C15	C16	178.6	180.0
C15	N3	C16	H161	358.6	0.0
C15	N3	C16	H162	123.9	120.0
C15	N3	C16	H163	233.4	240.0
H151	C15	N3	H152	234.7	239.9
H151	C15	N3	H153	125.3	119.9
H152	C15	N3	H153	250.6	240.0
H161	C16	N3	C15	358.6	0.0
N3	C16	H161	H162	125.2	120.0
N3	C16	H161	H163	234.8	240.0
H162	C16	H161	H163	109.5	120.0
H162	C16	N3	C15	123.9	120.0
N3	C16	H162	H161	230.4	240.0
N3	C16	H162	H163	115.2	120.0
H161	C16	H162	H163	244.8	240.0
H163	C16	N3	C15	233.4	240.0
N3	C16	H163	H161	129.6	120.0
N3	C16	H163	H162	244.9	240.0
H161	C16	H163	H162	115.2	119.9
N3	C15	H151	H152	125.3	120.0
N3	C15	H151	H153	234.7	240.1
H152	C15	H151	H153	109.4	120.1
N3	C15	H152	H151	226.3	240.0
N3	C15	H152	H153	113.2	119.9
H151	C15	H152	H153	246.8	239.9
N3	C15	H153	H151	133.7	119.9
N3	C15	H153	H152	246.8	240.0
H151	C15	H153	H152	113.1	120.1
C12	C11	C5	H5	298.2	180.7
C5	C11	C12	C13	238.2	120.0
C5	C11	C12	C14	119.6	240.0
C13	C11	C12	C14	241.4	120.0
C12	C11	C13	H131	59.6	63.8
C12	C11	C13	H132	184.8	183.8
C12	C11	C13	H133	294.4	303.8
C12	C11	C14	H141	299.5	299.9
C12	C11	C14	H142	64.7	60.0
C12	C11	C14	H143	174.2	180.0
H121	C12	C11	H122	234.7	240.0
H121	C12	C11	H123	125.2	120.0
H122	C12	C11	H123	250.5	240.0
C13	C11	C5	H5	178.0	300.7
C5	C11	C13	C12	120.4	240.0
C5	C11	C13	C14	239.4	120.0
C12	C11	C13	C14	119.1	240.1
C13	C11	C12	H121	301.8	60.0
C13	C11	C12	H122	67.1	180.0
C13	C11	C12	H123	176.6	300.0
C13	C11	C14	H141	58.1	180.0
C13	C11	C14	H142	183.4	300.1
C13	C11	C14	H143	292.8	60.1
H131	C13	C11	H132	234.8	240.1
H131	C13	C11	H133	125.3	120.0
H132	C13	C11	H133	250.5	240.0
C14	C11	C5	H5	57.9	60.7
C5	C11	C14	C12	240.5	120.0
C5	C11	C14	C13	121.9	240.0
C12	C11	C14	C13	241.4	120.0
C14	C11	C12	H121	60.4	300.0
C14	C11	C12	H122	185.7	60.0
C14	C11	C12	H123	295.1	180.0
C14	C11	C13	H131	300.6	183.8
C14	C11	C13	H132	65.8	303.7
C14	C11	C13	H133	175.3	63.7
H141	C14	C11	H142	234.8	239.9
H141	C14	C11	H143	125.3	119.9
H142	C14	C11	H143	250.5	240.0
H121	C12	C11	C13	301.8	60.0
H121	C12	C11	C14	60.4	300.0
C11	C12	H121	H122	125.3	120.0
C11	C12	H121	H123	234.8	240.0
H122	C12	H121	H123	109.5	120.0
H122	C12	C11	C13	67.1	180.0
H122	C12	C11	C14	185.7	60.0
C11	C12	H122	H121	236.5	240.0
C11	C12	H122	H123	118.2	120.0
H121	C12	H122	H123	241.8	240.0
H123	C12	C11	C13	176.6	300.0
H123	C12	C11	C14	295.1	180.0
C11	C12	H123	H121	123.5	120.0
C11	C12	H123	H122	241.7	240.0
H121	C12	H123	H122	118.3	120.0
H131	C13	C11	C14	300.6	183.8
C11	C13	H131	H132	125.2	120.0
C11	C13	H131	H133	234.8	239.9
H132	C13	H131	H133	109.6	120.0
H132	C13	C11	C14	65.8	303.7
C11	C13	H132	H131	234.8	240.0
C11	C13	H132	H133	117.4	120.0
H131	C13	H132	H133	242.6	240.0
H133	C13	C11	C14	175.3	63.7
C11	C13	H133	H131	125.3	120.0
C11	C13	H133	H132	242.7	240.0
H131	C13	H133	H132	117.4	119.9
C11	C14	H141	H142	125.3	120.1
C11	C14	H141	H143	234.7	240.1
H142	C14	H141	H143	109.4	120.0
C11	C14	H142	H141	236.3	239.9
C11	C14	H142	H143	118.2	120.0
H141	C14	H142	H143	241.9	240.1
C11	C14	H143	H141	123.7	120.0
C11	C14	H143	H142	241.8	240.0
H141	C14	H143	H142	118.1	120.0