PDB Chemical Component BAZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BAZ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.434 |
|
C1 |
C6 |
1.415 |
|
C1 |
C7 |
1.404 |
|
C2 |
C3 |
1.417 |
|
C2 |
H2 |
1.080 |
|
C3 |
C4 |
1.390 |
|
C3 |
H3 |
1.080 |
|
C4 |
C5 |
1.346 |
|
C4 |
N3 |
1.314 |
|
C5 |
C6 |
1.383 |
|
C5 |
N4 |
1.325 |
|
C6 |
H6 |
1.080 |
|
C7 |
N1 |
1.336 |
|
C7 |
N2 |
1.335 |
|
N1 |
HN1 |
1.000 |
|
N2 |
HN21 |
1.000 |
|
N2 |
HN22 |
0.999 |
|
N3 |
C8 |
1.331 |
|
N4 |
C8 |
1.324 |
|
N4 |
HN4 |
1.000 |
|
C8 |
C9 |
1.470 |
|
C1' |
C2' |
1.428 |
|
C1' |
C6' |
1.424 |
|
C1' |
C7' |
1.410 |
|
C2' |
C3' |
1.418 |
|
C2' |
H2' |
1.080 |
|
C3' |
C4' |
1.393 |
|
C3' |
H3' |
1.080 |
|
C4' |
C5' |
1.348 |
|
C4' |
N3' |
1.326 |
|
C5' |
C6' |
1.396 |
|
C5' |
N4' |
1.328 |
|
C6' |
H6' |
1.080 |
|
C7' |
N1' |
1.340 |
|
C7' |
N2' |
1.330 |
|
N1' |
H1' |
1.000 |
|
N2' |
H2'1 |
1.000 |
|
N2' |
H2'2 |
1.000 |
|
N3' |
C8' |
1.341 |
|
N3' |
ZN |
1.943 |
|
N4' |
C8' |
1.326 |
|
N4' |
HN4' |
1.000 |
|
C8' |
C9 |
1.490 |
|
ZN |
N3 |
2.292 |
|
C9 |
H91 |
1.100 |
|
C9 |
H92 |
1.100 |
|
Bond Angles for BAZ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
116.9 |
|
C2 |
C1 |
C7 |
121.7 |
|
C1 |
C2 |
C3 |
122.6 |
|
C1 |
C2 |
H2 |
118.7 |
|
C6 |
C1 |
C7 |
121.2 |
|
C1 |
C6 |
C5 |
120.0 |
|
C1 |
C6 |
H6 |
120.0 |
|
C1 |
C7 |
N1 |
119.2 |
|
C1 |
C7 |
N2 |
120.6 |
|
C3 |
C2 |
H2 |
118.7 |
|
C2 |
C3 |
C4 |
115.3 |
|
C2 |
C3 |
H3 |
122.3 |
|
C4 |
C3 |
H3 |
122.3 |
|
C3 |
C4 |
C5 |
124.1 |
|
C3 |
C4 |
N3 |
128.1 |
|
C5 |
C4 |
N3 |
107.7 |
|
C4 |
C5 |
C6 |
121.0 |
|
C4 |
C5 |
N4 |
109.4 |
|
C4 |
N3 |
C8 |
106.7 |
|
C6 |
C5 |
N4 |
129.6 |
|
C5 |
C6 |
H6 |
120.0 |
|
C5 |
N4 |
C8 |
105.3 |
|
C5 |
N4 |
HN4 |
127.4 |
|
N1 |
C7 |
N2 |
120.2 |
|
C7 |
N1 |
HN1 |
112.0 |
|
C7 |
N2 |
HN21 |
120.0 |
|
C7 |
N2 |
HN22 |
120.0 |
|
HN21 |
N2 |
HN22 |
120.0 |
|
N3 |
C8 |
N4 |
110.9 |
|
N3 |
C8 |
C9 |
119.3 |
|
C8 |
N4 |
HN4 |
127.3 |
|
N4 |
C8 |
C9 |
129.8 |
|
C8 |
C9 |
C8' |
114.3 |
|
C8 |
C9 |
H91 |
108.3 |
|
C8 |
C9 |
H92 |
108.3 |
|
C2' |
C1' |
C6' |
116.7 |
|
C2' |
C1' |
C7' |
119.9 |
|
C1' |
C2' |
C3' |
122.5 |
|
C1' |
C2' |
H2' |
118.8 |
|
C6' |
C1' |
C7' |
123.0 |
|
C1' |
C6' |
C5' |
119.9 |
|
C1' |
C6' |
H6' |
120.1 |
|
C1' |
C7' |
N1' |
122.7 |
|
C1' |
C7' |
N2' |
119.6 |
|
C3' |
C2' |
H2' |
118.8 |
|
C2' |
C3' |
C4' |
116.7 |
|
C2' |
C3' |
H3' |
121.7 |
|
C4' |
C3' |
H3' |
121.7 |
|
C3' |
C4' |
C5' |
122.8 |
|
C3' |
C4' |
N3' |
127.7 |
|
C5' |
C4' |
N3' |
109.5 |
|
C4' |
C5' |
C6' |
121.4 |
|
C4' |
C5' |
N4' |
108.2 |
|
C4' |
N3' |
C8' |
104.8 |
|
C4' |
N3' |
ZN |
127.1 |
|
C6' |
C5' |
N4' |
130.4 |
|
C5' |
C6' |
H6' |
120.0 |
|
C5' |
N4' |
C8' |
105.9 |
|
C5' |
N4' |
HN4' |
127.0 |
|
N1' |
C7' |
N2' |
117.6 |
|
C7' |
N1' |
H1' |
112.0 |
|
C7' |
N2' |
H2'1 |
120.0 |
|
C7' |
N2' |
H2'2 |
120.0 |
|
H2'1 |
N2' |
H2'2 |
120.0 |
|
C8' |
N3' |
ZN |
127.7 |
|
N3' |
C8' |
N4' |
111.5 |
|
N3' |
C8' |
C9 |
125.6 |
|
C8' |
N4' |
HN4' |
127.1 |
|
N4' |
C8' |
C9 |
122.8 |
|
C8' |
C9 |
H91 |
108.3 |
|
C8' |
C9 |
H92 |
108.2 |
|
H91 |
C9 |
H92 |
109.5 |
|
Torsion Angles for BAZ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C7 |
185.7 |
|
C2 |
C1 |
C6 |
C5 |
0.6 |
|
C2 |
C1 |
C6 |
H6 |
180.6 |
|
C2 |
C1 |
C7 |
N1 |
170.5 |
|
C2 |
C1 |
C7 |
N2 |
349.7 |
|
C3 |
C2 |
C1 |
H2 |
180.0 |
|
C1 |
C2 |
C3 |
C4 |
359.9 |
|
C1 |
C2 |
C3 |
H3 |
179.9 |
|
C2 |
C1 |
C6 |
C7 |
174.3 |
|
C6 |
C1 |
C2 |
C3 |
359.6 |
|
C6 |
C1 |
C2 |
H2 |
179.6 |
|
C6 |
C1 |
C7 |
N1 |
344.5 |
|
C6 |
C1 |
C7 |
N2 |
163.7 |
|
C4 |
C5 |
C6 |
C1 |
359.6 |
|
C1 |
C6 |
C5 |
N4 |
180.3 |
|
C5 |
C6 |
C1 |
H6 |
180.0 |
|
C2 |
C1 |
C7 |
C6 |
186.0 |
|
C7 |
C1 |
C2 |
C3 |
173.9 |
|
C7 |
C1 |
C2 |
H2 |
353.9 |
|
C7 |
C1 |
C6 |
C5 |
186.3 |
|
C7 |
C1 |
C6 |
H6 |
6.3 |
|
N1 |
C7 |
C1 |
N2 |
180.8 |
|
C1 |
C7 |
N1 |
HN1 |
179.2 |
|
C1 |
C7 |
N2 |
HN21 |
180.8 |
|
C1 |
C7 |
N2 |
HN22 |
0.8 |
|
C3 |
C2 |
C1 |
C6 |
359.6 |
|
C3 |
C2 |
C1 |
C7 |
173.9 |
|
C1 |
C2 |
C3 |
H2 |
180.0 |
|
C4 |
C3 |
C2 |
H3 |
180.0 |
|
C2 |
C3 |
C4 |
C5 |
0.3 |
|
C2 |
C3 |
C4 |
N3 |
180.6 |
|
H2 |
C2 |
C1 |
C6 |
179.6 |
|
H2 |
C2 |
C1 |
C7 |
353.9 |
|
C1 |
C2 |
H2 |
C3 |
180.0 |
|
H2 |
C2 |
C3 |
C4 |
179.9 |
|
H2 |
C2 |
C3 |
H3 |
359.9 |
|
C4 |
C3 |
C2 |
H2 |
179.9 |
|
C2 |
C3 |
C4 |
H3 |
180.0 |
|
C5 |
C4 |
C3 |
N3 |
179.7 |
|
C3 |
C4 |
C5 |
C6 |
359.9 |
|
C3 |
C4 |
C5 |
N4 |
179.3 |
|
C3 |
C4 |
N3 |
C8 |
180.3 |
|
H3 |
C3 |
C2 |
H2 |
359.9 |
|
C2 |
C3 |
H3 |
C4 |
180.0 |
|
H3 |
C3 |
C4 |
C5 |
180.3 |
|
H3 |
C3 |
C4 |
N3 |
0.6 |
|
C1 |
C6 |
C5 |
C4 |
359.6 |
|
C5 |
C4 |
C3 |
H3 |
180.3 |
|
C3 |
C4 |
C5 |
N3 |
180.2 |
|
C5 |
C4 |
N3 |
C8 |
0.5 |
|
C6 |
C5 |
C4 |
N4 |
180.6 |
|
C4 |
C5 |
C6 |
H6 |
179.6 |
|
C4 |
C5 |
N4 |
C8 |
0.9 |
|
C4 |
C5 |
N4 |
HN4 |
180.9 |
|
N3 |
C4 |
C3 |
H3 |
0.6 |
|
C3 |
C4 |
N3 |
C5 |
179.8 |
|
N3 |
C4 |
C5 |
C6 |
179.7 |
|
N3 |
C4 |
C5 |
N4 |
359.1 |
|
C4 |
N3 |
C8 |
N4 |
0.1 |
|
C4 |
N3 |
C8 |
C9 |
181.0 |
|
C5 |
C6 |
C1 |
C7 |
186.3 |
|
C1 |
C6 |
C5 |
H6 |
180.0 |
|
C6 |
C5 |
C4 |
N3 |
179.7 |
|
C4 |
C5 |
C6 |
N4 |
179.3 |
|
C6 |
C5 |
N4 |
C8 |
180.3 |
|
C6 |
C5 |
N4 |
HN4 |
0.3 |
|
N4 |
C5 |
C4 |
N3 |
359.1 |
|
C4 |
C5 |
N4 |
C6 |
180.7 |
|
N4 |
C5 |
C6 |
H6 |
0.3 |
|
N3 |
C8 |
N4 |
C5 |
359.4 |
|
C8 |
N4 |
C5 |
HN4 |
180.0 |
|
C5 |
N4 |
C8 |
C9 |
178.3 |
|
H6 |
C6 |
C1 |
C7 |
6.3 |
|
C1 |
C6 |
H6 |
C5 |
180.0 |
|
H6 |
C6 |
C5 |
N4 |
0.3 |
|
C1 |
C7 |
N1 |
N2 |
179.2 |
|
N1 |
C7 |
N2 |
HN21 |
360.0 |
|
N1 |
C7 |
N2 |
HN22 |
180.0 |
|
C1 |
C7 |
N2 |
N1 |
180.8 |
|
N2 |
C7 |
N1 |
HN1 |
0.0 |
|
HN21 |
N2 |
C7 |
HN22 |
180.0 |
|
HN1 |
N1 |
C7 |
N2 |
0.0 |
|
C7 |
N2 |
HN21 |
HN22 |
180.0 |
|
C7 |
N2 |
HN22 |
HN21 |
180.0 |
|
C5 |
N4 |
C8 |
N3 |
359.4 |
|
N3 |
C8 |
N4 |
HN4 |
179.4 |
|
N4 |
C8 |
N3 |
C9 |
179.1 |
|
N3 |
C8 |
C9 |
C8' |
317.3 |
|
N3 |
C8 |
C9 |
H91 |
78.0 |
|
N3 |
C8 |
C9 |
H92 |
196.6 |
|
C5 |
N4 |
C8 |
HN4 |
180.0 |
|
N3 |
C8 |
N4 |
C9 |
181.1 |
|
N4 |
C8 |
C9 |
C8' |
138.4 |
|
N4 |
C8 |
C9 |
H91 |
259.1 |
|
N4 |
C8 |
C9 |
H92 |
17.7 |
|
C5 |
N4 |
HN4 |
C8 |
180.0 |
|
HN4 |
N4 |
C8 |
C9 |
358.3 |
|
N3 |
C8 |
C9 |
N4 |
178.9 |
|
C9 |
C8 |
N4 |
HN4 |
358.3 |
|
N3' |
C8' |
C9 |
C8 |
40.6 |
|
N4' |
C8' |
C9 |
C8 |
225.2 |
|
C8' |
C9 |
C8 |
H91 |
239.3 |
|
C8' |
C9 |
C8 |
H92 |
120.7 |
|
H91 |
C9 |
C8 |
H92 |
241.4 |
|
C6' |
C1' |
C2' |
C7' |
186.5 |
|
C2' |
C1' |
C6' |
C5' |
359.8 |
|
C2' |
C1' |
C6' |
H6' |
179.8 |
|
C2' |
C1' |
C7' |
N1' |
163.4 |
|
C2' |
C1' |
C7' |
N2' |
342.0 |
|
C3' |
C2' |
C1' |
H2' |
180.0 |
|
C1' |
C2' |
C3' |
C4' |
0.2 |
|
C1' |
C2' |
C3' |
H3' |
180.2 |
|
C2' |
C1' |
C6' |
C7' |
173.3 |
|
C6' |
C1' |
C2' |
C3' |
360.0 |
|
C6' |
C1' |
C2' |
H2' |
180.0 |
|
C6' |
C1' |
C7' |
N1' |
336.4 |
|
C6' |
C1' |
C7' |
N2' |
155.1 |
|
C4' |
C5' |
C6' |
C1' |
0.3 |
|
C1' |
C6' |
C5' |
N4' |
180.6 |
|
C5' |
C6' |
C1' |
H6' |
180.0 |
|
C2' |
C1' |
C7' |
C6' |
187.0 |
|
C7' |
C1' |
C2' |
C3' |
173.4 |
|
C7' |
C1' |
C2' |
H2' |
353.4 |
|
C7' |
C1' |
C6' |
C5' |
186.5 |
|
C7' |
C1' |
C6' |
H6' |
6.5 |
|
N1' |
C7' |
C1' |
N2' |
181.4 |
|
C1' |
C7' |
N1' |
H1' |
178.7 |
|
C1' |
C7' |
N2' |
H2'1 |
181.3 |
|
C1' |
C7' |
N2' |
H2'2 |
1.2 |
|
C3' |
C2' |
C1' |
C6' |
360.0 |
|
C3' |
C2' |
C1' |
C7' |
173.4 |
|
C1' |
C2' |
C3' |
H2' |
180.0 |
|
C4' |
C3' |
C2' |
H3' |
180.0 |
|
C2' |
C3' |
C4' |
C5' |
359.9 |
|
C2' |
C3' |
C4' |
N3' |
179.7 |
|
H2' |
C2' |
C1' |
C6' |
180.0 |
|
H2' |
C2' |
C1' |
C7' |
353.4 |
|
C1' |
C2' |
H2' |
C3' |
180.0 |
|
H2' |
C2' |
C3' |
C4' |
180.2 |
|
H2' |
C2' |
C3' |
H3' |
0.2 |
|
C4' |
C3' |
C2' |
H2' |
180.2 |
|
C2' |
C3' |
C4' |
H3' |
180.0 |
|
C5' |
C4' |
C3' |
N3' |
180.2 |
|
C3' |
C4' |
C5' |
C6' |
359.8 |
|
C3' |
C4' |
C5' |
N4' |
179.6 |
|
C3' |
C4' |
N3' |
C8' |
179.8 |
|
C3' |
C4' |
N3' |
ZN |
353.4 |
|
H3' |
C3' |
C2' |
H2' |
0.2 |
|
C2' |
C3' |
H3' |
C4' |
180.0 |
|
H3' |
C3' |
C4' |
C5' |
179.9 |
|
H3' |
C3' |
C4' |
N3' |
359.7 |
|
C1' |
C6' |
C5' |
C4' |
0.3 |
|
C5' |
C4' |
C3' |
H3' |
179.9 |
|
C3' |
C4' |
C5' |
N3' |
179.8 |
|
C5' |
C4' |
N3' |
C8' |
359.6 |
|
C5' |
C4' |
N3' |
ZN |
173.2 |
|
C6' |
C5' |
C4' |
N4' |
180.2 |
|
C4' |
C5' |
C6' |
H6' |
180.3 |
|
C4' |
C5' |
N4' |
C8' |
0.8 |
|
C4' |
C5' |
N4' |
HN4' |
180.8 |
|
N3' |
C4' |
C3' |
H3' |
359.7 |
|
C3' |
C4' |
N3' |
C5' |
180.2 |
|
N3' |
C4' |
C5' |
C6' |
180.0 |
|
N3' |
C4' |
C5' |
N4' |
359.8 |
|
C8' |
N3' |
C4' |
ZN |
186.3 |
|
C4' |
N3' |
C8' |
N4' |
1.0 |
|
C4' |
N3' |
C8' |
C9 |
185.1 |
|
C5' |
C6' |
C1' |
C7' |
186.5 |
|
C1' |
C6' |
C5' |
H6' |
180.0 |
|
C6' |
C5' |
C4' |
N3' |
180.0 |
|
C4' |
C5' |
C6' |
N4' |
179.7 |
|
C6' |
C5' |
N4' |
C8' |
180.5 |
|
C6' |
C5' |
N4' |
HN4' |
0.6 |
|
N4' |
C5' |
C4' |
N3' |
359.8 |
|
C4' |
C5' |
N4' |
C6' |
180.2 |
|
N4' |
C5' |
C6' |
H6' |
0.6 |
|
N3' |
C8' |
N4' |
C5' |
358.9 |
|
C8' |
N4' |
C5' |
HN4' |
180.0 |
|
C5' |
N4' |
C8' |
C9 |
174.9 |
|
H6' |
C6' |
C1' |
C7' |
6.5 |
|
C1' |
C6' |
H6' |
C5' |
180.0 |
|
H6' |
C6' |
C5' |
N4' |
0.6 |
|
C1' |
C7' |
N1' |
N2' |
178.7 |
|
N1' |
C7' |
N2' |
H2'1 |
360.0 |
|
N1' |
C7' |
N2' |
H2'2 |
180.0 |
|
C1' |
C7' |
N2' |
N1' |
181.3 |
|
N2' |
C7' |
N1' |
H1' |
360.0 |
|
H2'1 |
N2' |
C7' |
H2'2 |
180.0 |
|
H1' |
N1' |
C7' |
N2' |
360.0 |
|
C7' |
N2' |
H2'1 |
H2'2 |
180.0 |
|
C7' |
N2' |
H2'2 |
H2'1 |
180.0 |
|
C8 |
C9 |
C8' |
N3' |
40.6 |
|
C4' |
N3' |
C8' |
ZN |
173.6 |
|
C5' |
N4' |
C8' |
N3' |
358.9 |
|
N3' |
C8' |
N4' |
HN4' |
178.9 |
|
N4' |
C8' |
N3' |
C9 |
175.8 |
|
N3' |
C8' |
C9 |
H91 |
279.9 |
|
N3' |
C8' |
C9 |
H92 |
161.3 |
|
C4' |
N3' |
ZN |
C8' |
187.8 |
|
ZN |
N3' |
C8' |
N4' |
187.3 |
|
ZN |
N3' |
C8' |
C9 |
11.5 |
|
C8 |
C9 |
C8' |
N4' |
225.2 |
|
C5' |
N4' |
C8' |
HN4' |
180.0 |
|
N4' |
C8' |
N3' |
ZN |
187.3 |
|
N3' |
C8' |
N4' |
C9 |
184.0 |
|
N4' |
C8' |
C9 |
H91 |
104.5 |
|
N4' |
C8' |
C9 |
H92 |
345.9 |
|
C5' |
N4' |
HN4' |
C8' |
180.0 |
|
HN4' |
N4' |
C8' |
C9 |
354.9 |
|
C8 |
C9 |
C8' |
H91 |
120.7 |
|
C8 |
C9 |
C8' |
H92 |
239.3 |
|
C9 |
C8' |
N3' |
ZN |
11.5 |
|
N3' |
C8' |
C9 |
N4' |
175.4 |
|
C9 |
C8' |
N4' |
HN4' |
354.9 |
|
H91 |
C9 |
C8' |
H92 |
118.6 |
|
C8 |
C9 |
H91 |
C8' |
235.6 |
|
C8 |
C9 |
H91 |
H92 |
117.8 |
|
C8' |
C9 |
H91 |
H92 |
242.2 |
|
C8 |
C9 |
H92 |
C8' |
124.4 |
|
C8 |
C9 |
H92 |
H91 |
242.2 |
|
C8' |
C9 |
H92 |
H91 |
117.8 |
|