PDB Chemical Component BAB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BAB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.433 1.396
C1 C6 1.432 1.398
C1 C7 1.499 1.455
C2 C3 1.393 1.400
C2 H2 1.080 1.088
C3 C4 1.436 1.405
C3 H3 1.080 1.085
C4 C5 1.427 1.392
C4 N3 1.371 1.377
C5 C6 1.420 1.395
C5 N4 1.387 1.372
C6 H6 1.080 1.086
C7 N1 1.307 1.382
C7 N2 1.382 1.382
C8 C9 1.527 1.510
C8 N3 1.314 1.293
C8 N4 1.368 1.350
C9 C8' 1.529 1.481
C9 H91 1.100 1.100
C9 H92 1.100 1.099
N2 HN21 1.000 1.015
N2 HN22 1.000 1.013
N4 HN4 1.000 1.011
C1' C2' 1.436 1.411
C1' C6' 1.423 1.398
C1' C7' 1.498 1.455
C2' C3' 1.396 1.398
C2' H2' 1.080 1.089
C3' C4' 1.436 1.374
C3' H3' 1.080 1.084
C4' C5' 1.429 1.415
C4' N3' 1.358 1.401
C5' C6' 1.413 1.375
C5' N4' 1.392 1.400
C6' H6' 1.080 1.085
C7' N1' 1.311 1.382
C7' N2' 1.377 1.383
C8' N3' 1.312 1.388
C8' N4' 1.369 1.388
N2' H2'1 1.000 1.014
N2' H2'2 1.000 1.014
N4' HN4' 1.000 1.008
HN1 N1' 1.000 1.014
HN3 N3' 1.000 1.008
HN5 N1 1.000 1.014
HN6 N1 1.000 1.015
HN2 N1' 1.000 1.015

Bond Angles for BAB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 119.5 121.3
C2 C1 C7 120.1 119.5
C1 C2 C3 120.5 121.0
C1 C2 H2 119.8 120.2
C6 C1 C7 120.3 119.3
C1 C6 C5 120.0 116.8
C1 C6 H6 120.0 121.9
C1 C7 N1 120.3 123.3
C1 C7 N2 120.4 123.3
C3 C2 H2 119.8 118.8
C2 C3 C4 120.5 118.5
C2 C3 H3 119.7 120.5
C4 C3 H3 119.7 121.0
C3 C4 C5 119.5 119.2
C3 C4 N3 134.0 130.0
C5 C4 N3 106.5 110.8
C4 C5 C6 120.0 123.3
C4 C5 N4 105.8 104.4
C4 N3 C8 109.9 103.8
C6 C5 N4 134.2 132.3
C5 C6 H6 120.0 121.4
C5 N4 C8 108.0 106.5
C5 N4 HN4 126.0 126.0
N1 C7 N2 119.3 113.4
C7 N2 HN21 125.6 121.7
C7 N2 HN22 108.8 121.9
C9 C8 N3 126.9 125.5
C9 C8 N4 123.4 120.0
C8 C9 C8' 115.2 113.1
C8 C9 H91 106.3 108.9
C8 C9 H92 107.6 109.6
N3 C8 N4 109.8 114.5
C8 N4 HN4 126.0 127.5
C8' C9 H91 106.3 109.9
C8' C9 H92 107.6 109.7
C9 C8' N3' 123.6 125.5
C9 C8' N4' 126.6 125.3
H91 C9 H92 114.1 105.4
HN21 N2 HN22 125.6 116.4
C2' C1' C6' 119.4 121.2
C2' C1' C7' 120.4 119.3
C1' C2' C3' 120.4 121.2
C1' C2' H2' 119.8 119.9
C6' C1' C7' 120.2 119.5
C1' C6' C5' 120.6 117.2
C1' C6' H6' 119.7 121.6
C1' C7' N1' 120.4 123.3
C1' C7' N2' 120.3 123.3
C3' C2' H2' 119.8 118.9
C2' C3' C4' 120.1 117.1
C2' C3' H3' 119.9 121.0
C4' C3' H3' 119.9 121.9
C3' C4' C5' 119.8 121.7
C3' C4' N3' 134.0 130.7
C5' C4' N3' 106.2 107.6
C4' C5' C6' 119.6 121.6
C4' C5' N4' 106.0 107.7
C4' N3' C8' 110.6 107.8
C6' C5' N4' 134.4 130.7
C5' C6' H6' 119.7 121.2
C5' N4' C8' 107.3 107.8
C5' N4' HN4' 126.3 124.6
N1' C7' N2' 119.3 113.4
C7' N2' H2'1 125.6 121.7
C7' N2' H2'2 108.9 121.9
N3' C8' N4' 109.8 109.2
C8' N4' HN4' 126.4 127.6
H2'1 N2' H2'2 125.5 116.4

Torsion Angles for BAB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 180.0 180.1
C2 C1 C6 C5 0.3 360.0
C2 C1 C6 H6 180.3 180.0
C2 C1 C7 N1 180.1 330.0
C2 C1 C7 N2 360.0 150.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 0.2 360.0
C1 C2 C3 H3 180.3 180.0
C2 C1 C6 C7 180.0 179.9
C6 C1 C2 C3 359.7 0.0
C6 C1 C2 H2 179.8 180.0
C6 C1 C7 N1 0.1 149.9
C6 C1 C7 N2 180.0 329.9
C4 C5 C6 C1 359.6 0.0
C1 C6 C5 N4 180.1 180.0
C5 C6 C1 H6 180.0 180.0
C2 C1 C7 C6 180.0 180.1
C7 C1 C2 C3 179.8 179.9
C7 C1 C2 H2 359.8 360.0
C7 C1 C6 C5 180.3 180.1
C7 C1 C6 H6 0.3 0.1
N1 C7 C1 N2 180.1 180.0
C1 C7 N2 HN21 180.1 179.7
C1 C7 N2 HN22 0.1 357.6
C3 C2 C1 C6 359.7 0.0
C3 C2 C1 C7 179.8 179.9
C1 C2 C3 H2 180.0 180.0
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C5 359.7 0.0
C2 C3 C4 N3 180.4 180.0
H2 C2 C1 C6 179.8 180.0
H2 C2 C1 C7 359.8 360.0
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 180.2 180.0
H2 C2 C3 H3 0.3 360.0
C4 C3 C2 H2 180.2 180.0
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 N3 179.4 180.1
C3 C4 C5 C6 0.3 360.0
C3 C4 C5 N4 180.0 180.0
C3 C4 N3 C8 179.8 180.0
H3 C3 C2 H2 0.3 360.0
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 179.7 180.0
H3 C3 C4 N3 0.3 360.0
C1 C6 C5 C4 359.6 0.0
C5 C4 C3 H3 179.7 180.0
C3 C4 C5 N3 180.5 179.9
C5 C4 N3 C8 0.4 360.0
C6 C5 C4 N4 180.3 180.0
C4 C5 C6 H6 179.6 180.0
C4 C5 N4 C8 0.4 360.0
C4 C5 N4 HN4 180.4 179.9
N3 C4 C3 H3 0.3 360.0
C3 C4 N3 C5 179.4 180.1
N3 C4 C5 C6 179.9 180.0
N3 C4 C5 N4 359.5 0.0
C9 C8 N3 C4 180.1 180.1
C4 N3 C8 N4 359.9 0.0
C5 C6 C1 C7 180.3 180.1
C1 C6 C5 H6 180.0 180.0
C6 C5 C4 N3 179.9 180.0
C4 C5 C6 N4 179.6 180.0
C6 C5 N4 C8 180.0 180.0
C6 C5 N4 HN4 0.0 359.9
N4 C5 C4 N3 359.5 0.0
C4 C5 N4 C6 180.4 180.0
N4 C5 C6 H6 0.1 0.0
C9 C8 N4 C5 179.6 179.9
N3 C8 N4 C5 359.8 360.0
C8 N4 C5 HN4 180.0 180.1
H6 C6 C1 C7 0.3 0.1
C1 C6 H6 C5 180.0 180.0
H6 C6 C5 N4 0.1 0.0
C1 C7 N1 N2 179.9 180.0
N1 C7 N2 HN21 359.9 359.7
N1 C7 N2 HN22 180.0 177.6
C1 C7 N2 N1 180.1 180.0
HN21 N2 C7 HN22 180.0 182.0
C4 N3 C8 C9 180.1 180.1
C5 N4 C8 C9 179.6 179.9
N3 C8 C9 N4 179.7 179.9
C9 C8 N4 HN4 359.6 360.0
C8' C9 C8 H91 117.4 237.5
C8' C9 C8 H92 240.0 122.7
C8 C9 C8' N3' 179.4 272.0
C8 C9 C8' N4' 359.6 90.0
H91 C9 C8 H92 122.6 245.2
C5 N4 C8 N3 359.8 360.0
C9 C8 N3 N4 180.3 180.1
N3 C8 C9 C8' 0.3 270.0
N3 C8 C9 H91 242.9 32.5
N3 C8 C9 H92 120.3 147.3
N3 C8 N4 HN4 179.8 180.0
C5 N4 C8 HN4 180.0 179.9
C9 C8 N4 N3 179.8 179.9
N4 C8 C9 C8' 180.6 90.1
N4 C8 C9 H91 63.2 212.6
N4 C8 C9 H92 300.6 327.3
C8' C9 C8 N3 0.3 270.0
C8' C9 C8 N4 180.6 90.1
C8 C9 C8' H91 242.6 121.9
C8 C9 C8' H92 120.0 237.4
H91 C9 C8' H92 237.4 115.4
C4' N3' C8' C9 180.2 178.4
C5' N4' C8' C9 179.8 181.6
N3' C8' C9 N4' 179.8 181.9
C9 C8' N4' HN4' 359.8 1.0
H91 C9 C8 N3 242.9 32.5
H91 C9 C8 N4 63.2 212.6
C8 C9 H91 C8' 123.2 235.6
C8 C9 H91 H92 241.6 117.5
C8' C9 H91 H92 118.4 241.8
H91 C9 C8' N3' 296.8 150.1
H91 C9 C8' N4' 117.0 328.1
H92 C9 C8 N3 120.3 147.3
H92 C9 C8 N4 300.6 327.3
C8 C9 H92 C8' 235.3 124.7
C8 C9 H92 H91 117.6 243.0
C8' C9 H92 H91 242.3 118.3
H92 C9 C8' N3' 59.4 34.6
H92 C9 C8' N4' 239.6 212.7
C7 N2 HN21 HN22 180.0 178.1
C7 N2 HN22 HN21 180.0 181.9
C5 N4 HN4 C8 180.0 180.1
C6' C1' C2' C7' 179.8 180.0
C2' C1' C6' C5' 0.1 360.0
C2' C1' C6' H6' 180.1 180.0
C2' C1' C7' N1' 179.9 330.0
C2' C1' C7' N2' 359.8 150.1
C3' C2' C1' H2' 180.0 180.0
C1' C2' C3' C4' 0.1 360.0
C1' C2' C3' H3' 180.1 180.0
C2' C1' C6' C7' 180.2 180.0
C6' C1' C2' C3' 359.9 0.1
C6' C1' C2' H2' 179.9 180.0
C6' C1' C7' N1' 0.1 150.1
C6' C1' C7' N2' 180.0 330.1
C4' C5' C6' C1' 359.9 360.0
C1' C6' C5' N4' 180.0 180.0
C5' C6' C1' H6' 180.0 180.0
C2' C1' C7' C6' 179.8 180.0
C7' C1' C2' C3' 180.1 180.1
C7' C1' C2' H2' 0.1 0.0
C7' C1' C6' C5' 179.9 179.9
C7' C1' C6' H6' 359.9 360.0
N1' C7' C1' N2' 180.1 180.0
C1' C7' N2' H2'1 180.1 179.7
C1' C7' N2' H2'2 0.1 357.6
C3' C2' C1' C6' 359.9 0.1
C3' C2' C1' C7' 180.1 180.1
C1' C2' C3' H2' 180.0 180.0
C4' C3' C2' H3' 180.0 180.0
C2' C3' C4' C5' 359.9 360.0
C2' C3' C4' N3' 180.0 180.1
H2' C2' C1' C6' 179.9 180.0
H2' C2' C1' C7' 0.1 0.0
C1' C2' H2' C3' 180.0 180.0
H2' C2' C3' C4' 180.1 180.0
H2' C2' C3' H3' 0.1 0.0
C4' C3' C2' H2' 180.1 180.0
C2' C3' C4' H3' 180.0 180.0
C5' C4' C3' N3' 179.9 179.9
C3' C4' C5' C6' 0.1 0.0
C3' C4' C5' N4' 180.0 180.0
C3' C4' N3' C8' 180.0 179.9
H3' C3' C2' H2' 0.1 0.0
C2' C3' H3' C4' 180.0 180.0
H3' C3' C4' C5' 179.9 180.0
H3' C3' C4' N3' 360.0 0.0
C1' C6' C5' C4' 359.9 360.0
C5' C4' C3' H3' 179.9 180.0
C3' C4' C5' N3' 180.1 180.1
C5' C4' N3' C8' 0.0 360.0
C6' C5' C4' N4' 180.1 180.0
C4' C5' C6' H6' 179.9 180.0
C4' C5' N4' C8' 0.0 0.1
C4' C5' N4' HN4' 180.0 180.6
C9 C8' N3' C4' 180.2 178.4
N3' C4' C3' H3' 360.0 0.0
C3' C4' N3' C5' 179.9 179.9
N3' C4' C5' C6' 180.0 180.0
N3' C4' C5' N4' 360.0 360.0
C4' N3' C8' N4' 360.0 0.1
C5' C6' C1' C7' 179.9 179.9
C1' C6' C5' H6' 180.0 180.0
C6' C5' C4' N3' 180.0 180.0
C4' C5' C6' N4' 179.9 180.0
C6' C5' N4' C8' 179.9 180.1
C6' C5' N4' HN4' 359.9 0.6
C9 C8' N4' C5' 179.8 181.6
N4' C5' C4' N3' 360.0 360.0
C4' C5' N4' C6' 180.1 180.0
N4' C5' C6' H6' 360.0 360.0
N3' C8' N4' C5' 0.0 359.9
C8' N4' C5' HN4' 180.0 179.4
H6' C6' C1' C7' 359.9 360.0
C1' C6' H6' C5' 180.0 180.0
H6' C6' C5' N4' 360.0 360.0
C1' C7' N1' N2' 179.9 180.0
N1' C7' N2' H2'1 360.0 359.7
N1' C7' N2' H2'2 180.0 177.6
C1' C7' N2' N1' 180.1 180.0
H2'1 N2' C7' H2'2 180.0 182.1
N3' C8' C9 H91 296.8 150.1
N3' C8' C9 H92 59.4 34.6
C9 C8' N3' N4' 180.2 178.3
C5' N4' C8' N3' 0.0 359.9
N3' C8' N4' HN4' 180.0 179.3
N4' C8' C9 H91 117.0 328.1
N4' C8' C9 H92 239.6 212.7
C9 C8' N4' N3' 179.8 181.7
C5' N4' C8' HN4' 180.0 180.6
C7' N2' H2'1 H2'2 180.0 178.0
C7' N2' H2'2 H2'1 180.0 182.0
C5' N4' HN4' C8' 180.0 179.3