PDB Chemical Component B86
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for B86
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
N2 |
1.348 |
1.326 |
C1 |
C6 |
1.470 |
1.412 |
C1 |
N7 |
1.348 |
1.377 |
N2 |
C3 |
1.355 |
1.331 |
C3 |
N4 |
1.422 |
1.346 |
C3 |
O9 |
1.239 |
1.221 |
N4 |
C5 |
1.333 |
1.365 |
N4 |
C10 |
1.468 |
1.465 |
C5 |
C6 |
1.378 |
1.355 |
C6 |
F8 |
1.338 |
1.351 |
C10 |
O11 |
1.433 |
1.444 |
C10 |
C14 |
1.519 |
1.545 |
O11 |
C12 |
1.426 |
1.444 |
C12 |
C13 |
1.499 |
1.545 |
C12 |
C15 |
1.511 |
1.529 |
C13 |
O13 |
1.434 |
1.429 |
C13 |
C14 |
1.514 |
1.545 |
C15 |
O16 |
1.423 |
1.429 |
C5 |
H5 |
1.080 |
1.080 |
N7 |
HN7 |
1.000 |
0.970 |
N7 |
HN7A |
1.000 |
0.970 |
C10 |
H10 |
1.100 |
1.090 |
C12 |
H12 |
1.100 |
1.090 |
C13 |
H13 |
1.100 |
1.090 |
O13 |
HO13 |
0.950 |
0.967 |
C14 |
H14 |
1.100 |
1.089 |
C14 |
H14A |
1.100 |
1.090 |
C15 |
H15 |
1.100 |
1.090 |
C15 |
H15A |
1.100 |
1.090 |
O16 |
HO16 |
0.949 |
0.967 |
Bond Angles for B86
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N2 |
C1 |
C6 |
119.1 |
119.6 |
N2 |
C1 |
N7 |
122.4 |
120.2 |
C1 |
N2 |
C3 |
119.2 |
120.7 |
C6 |
C1 |
N7 |
118.5 |
120.2 |
C1 |
C6 |
C5 |
120.1 |
119.0 |
C1 |
C6 |
F8 |
118.0 |
120.5 |
C1 |
N7 |
HN7 |
120.0 |
120.0 |
C1 |
N7 |
HN7A |
120.0 |
120.0 |
N2 |
C3 |
N4 |
121.9 |
121.1 |
N2 |
C3 |
O9 |
117.8 |
119.5 |
N4 |
C3 |
O9 |
120.3 |
119.4 |
C3 |
N4 |
C5 |
120.6 |
120.3 |
C3 |
N4 |
C10 |
120.0 |
119.8 |
C5 |
N4 |
C10 |
119.3 |
119.8 |
N4 |
C5 |
C6 |
119.1 |
119.2 |
N4 |
C5 |
H5 |
120.5 |
120.3 |
N4 |
C10 |
O11 |
106.6 |
110.4 |
N4 |
C10 |
C14 |
117.8 |
110.3 |
N4 |
C10 |
H10 |
104.4 |
110.3 |
C5 |
C6 |
F8 |
121.9 |
120.5 |
C6 |
C5 |
H5 |
120.4 |
120.4 |
O11 |
C10 |
C14 |
104.9 |
104.9 |
C10 |
O11 |
C12 |
111.0 |
105.3 |
O11 |
C10 |
H10 |
117.6 |
110.4 |
C10 |
C14 |
C13 |
102.4 |
104.0 |
C14 |
C10 |
H10 |
106.2 |
110.4 |
C10 |
C14 |
H14 |
111.9 |
110.6 |
C10 |
C14 |
H14A |
111.9 |
110.5 |
O11 |
C12 |
C13 |
106.2 |
104.8 |
O11 |
C12 |
C15 |
109.9 |
110.4 |
O11 |
C12 |
H12 |
111.5 |
110.3 |
C13 |
C12 |
C15 |
110.0 |
110.4 |
C12 |
C13 |
O13 |
105.3 |
110.5 |
C12 |
C13 |
C14 |
105.4 |
104.1 |
C13 |
C12 |
H12 |
111.4 |
110.4 |
C12 |
C13 |
H13 |
115.2 |
110.5 |
C12 |
C15 |
O16 |
108.9 |
109.5 |
C15 |
C12 |
H12 |
107.8 |
110.5 |
C12 |
C15 |
H15 |
109.6 |
109.5 |
C12 |
C15 |
H15A |
109.7 |
109.5 |
O13 |
C13 |
C14 |
111.1 |
110.5 |
O13 |
C13 |
H13 |
109.9 |
110.5 |
C13 |
O13 |
HO13 |
109.5 |
114.0 |
C14 |
C13 |
H13 |
109.8 |
110.6 |
C13 |
C14 |
H14 |
111.9 |
110.5 |
C13 |
C14 |
H14A |
111.9 |
110.5 |
O16 |
C15 |
H15 |
109.7 |
109.4 |
O16 |
C15 |
H15A |
109.6 |
109.4 |
C15 |
O16 |
HO16 |
109.5 |
114.1 |
HN7 |
N7 |
HN7A |
120.0 |
120.0 |
H14 |
C14 |
H14A |
106.9 |
110.6 |
H15 |
C15 |
H15A |
109.3 |
109.5 |
Torsion Angles for B86
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
N2 |
N7 |
180.7 |
180.3 |
N2 |
C1 |
C6 |
C5 |
359.3 |
359.9 |
N2 |
C1 |
C6 |
F8 |
178.6 |
180.0 |
N2 |
C1 |
N7 |
HN7 |
0.0 |
360.0 |
N2 |
C1 |
N7 |
HN7A |
180.0 |
180.0 |
C1 |
N2 |
C3 |
N4 |
359.1 |
360.0 |
C1 |
N2 |
C3 |
O9 |
179.8 |
180.0 |
N2 |
C1 |
C6 |
N7 |
179.3 |
179.7 |
C6 |
C1 |
N2 |
C3 |
1.1 |
0.0 |
C6 |
C1 |
N7 |
HN7 |
179.3 |
179.7 |
C6 |
C1 |
N7 |
HN7A |
359.3 |
359.7 |
N4 |
C5 |
C6 |
C1 |
0.1 |
0.1 |
C5 |
C6 |
C1 |
F8 |
180.7 |
179.9 |
C1 |
C6 |
C5 |
H5 |
180.2 |
180.0 |
N2 |
C1 |
N7 |
C6 |
180.7 |
180.3 |
N7 |
C1 |
N2 |
C3 |
180.3 |
179.8 |
N7 |
C1 |
C6 |
C5 |
180.0 |
180.2 |
N7 |
C1 |
C6 |
F8 |
359.3 |
0.3 |
HN7 |
N7 |
C1 |
HN7A |
180.0 |
180.0 |
C3 |
N2 |
C1 |
C6 |
1.1 |
0.0 |
C3 |
N2 |
C1 |
N7 |
180.3 |
179.8 |
N4 |
C3 |
N2 |
O9 |
179.3 |
180.0 |
N2 |
C3 |
N4 |
C5 |
0.3 |
0.1 |
N2 |
C3 |
N4 |
C10 |
178.0 |
180.1 |
N2 |
C3 |
N4 |
O9 |
180.7 |
180.0 |
C5 |
N4 |
C3 |
C10 |
182.3 |
180.0 |
C3 |
N4 |
C5 |
C6 |
0.1 |
359.9 |
C3 |
N4 |
C5 |
H5 |
180.0 |
180.0 |
C3 |
N4 |
C10 |
O11 |
234.3 |
53.5 |
C3 |
N4 |
C10 |
C14 |
116.9 |
298.1 |
C3 |
N4 |
C10 |
H10 |
359.4 |
175.8 |
N2 |
C3 |
O9 |
N4 |
179.3 |
180.0 |
O9 |
C3 |
N4 |
C5 |
179.6 |
180.0 |
O9 |
C3 |
N4 |
C10 |
357.3 |
0.0 |
C1 |
C6 |
C5 |
N4 |
0.1 |
0.1 |
C5 |
N4 |
C3 |
O9 |
179.6 |
180.0 |
C3 |
N4 |
C5 |
C10 |
177.7 |
180.0 |
C5 |
N4 |
C10 |
O11 |
52.1 |
233.5 |
C5 |
N4 |
C10 |
C14 |
294.7 |
118.1 |
C5 |
N4 |
C10 |
H10 |
177.2 |
355.8 |
N4 |
C5 |
C6 |
F8 |
180.8 |
180.0 |
C6 |
C5 |
N4 |
H5 |
180.0 |
179.9 |
C10 |
N4 |
C3 |
O9 |
357.3 |
0.0 |
C3 |
N4 |
C10 |
C5 |
182.3 |
180.0 |
C10 |
N4 |
C5 |
C6 |
182.4 |
179.9 |
C10 |
N4 |
C5 |
H5 |
2.3 |
360.0 |
O11 |
C10 |
N4 |
C14 |
117.4 |
115.4 |
N4 |
C10 |
O11 |
C12 |
212.6 |
200.7 |
O11 |
C10 |
N4 |
H10 |
234.9 |
237.7 |
N4 |
C10 |
C14 |
C13 |
149.2 |
142.8 |
C14 |
C10 |
N4 |
H10 |
117.5 |
122.3 |
N4 |
C10 |
C14 |
H14 |
269.2 |
261.4 |
N4 |
C10 |
C14 |
H14A |
29.2 |
24.2 |
C5 |
C6 |
C1 |
N7 |
180.0 |
180.2 |
C1 |
C6 |
C5 |
F8 |
179.3 |
180.1 |
C6 |
C5 |
N4 |
C10 |
182.4 |
179.9 |
N4 |
C5 |
C6 |
H5 |
180.0 |
180.1 |
F8 |
C6 |
C1 |
N7 |
359.3 |
0.3 |
C1 |
C6 |
F8 |
C5 |
180.7 |
179.9 |
F8 |
C6 |
C5 |
H5 |
0.9 |
359.9 |
N4 |
C10 |
O11 |
C14 |
234.3 |
241.2 |
N4 |
C10 |
O11 |
H10 |
116.7 |
122.2 |
O11 |
C10 |
C14 |
C13 |
30.9 |
24.0 |
C14 |
C10 |
O11 |
H10 |
242.3 |
241.1 |
O11 |
C10 |
C14 |
H14 |
150.9 |
142.6 |
O11 |
C10 |
C14 |
H14A |
270.9 |
265.4 |
C10 |
O11 |
C12 |
C13 |
3.0 |
40.5 |
C10 |
O11 |
C12 |
C15 |
122.0 |
159.3 |
C10 |
O11 |
C12 |
H12 |
241.4 |
281.7 |
N4 |
C10 |
C14 |
O11 |
118.3 |
118.9 |
N4 |
C10 |
C14 |
H10 |
243.4 |
237.8 |
C14 |
C10 |
O11 |
C12 |
338.3 |
319.5 |
O11 |
C10 |
C14 |
H10 |
125.1 |
118.9 |
C12 |
C13 |
C14 |
C10 |
330.8 |
0.0 |
O13 |
C13 |
C14 |
C10 |
84.4 |
118.6 |
C10 |
C14 |
C13 |
H13 |
206.1 |
241.3 |
C13 |
C14 |
C10 |
H14 |
240.0 |
241.4 |
C13 |
C14 |
C10 |
H14A |
120.0 |
118.6 |
H14 |
C14 |
C10 |
H14A |
240.0 |
237.2 |
C12 |
O11 |
C10 |
C14 |
338.3 |
319.5 |
C12 |
O11 |
C10 |
H10 |
95.9 |
78.4 |
C13 |
C12 |
O11 |
C15 |
241.0 |
241.2 |
O11 |
C12 |
C13 |
O13 |
259.5 |
217.4 |
O11 |
C12 |
C13 |
C14 |
17.1 |
336.0 |
C13 |
C12 |
O11 |
H12 |
121.5 |
118.8 |
O11 |
C12 |
C13 |
H13 |
138.3 |
94.8 |
O11 |
C12 |
C15 |
O16 |
303.4 |
66.5 |
C15 |
C12 |
O11 |
H12 |
240.6 |
237.6 |
O11 |
C12 |
C15 |
H15 |
63.4 |
186.4 |
O11 |
C12 |
C15 |
H15A |
183.4 |
306.5 |
C10 |
C14 |
C13 |
C12 |
330.8 |
0.0 |
O11 |
C12 |
C13 |
C15 |
119.0 |
118.8 |
O11 |
C12 |
C13 |
H12 |
238.4 |
241.2 |
C13 |
C12 |
C15 |
O16 |
60.1 |
181.9 |
C15 |
C12 |
C13 |
H12 |
119.5 |
122.4 |
C13 |
C12 |
C15 |
H15 |
180.1 |
301.8 |
C13 |
C12 |
C15 |
H15A |
300.1 |
61.9 |
O13 |
C13 |
C12 |
C14 |
242.4 |
241.4 |
O13 |
C13 |
C12 |
H13 |
121.2 |
122.6 |
C12 |
C13 |
O13 |
HO13 |
180.0 |
180.1 |
C14 |
C13 |
C12 |
H13 |
238.8 |
241.2 |
C12 |
C13 |
C14 |
H14 |
210.8 |
241.4 |
C12 |
C13 |
C14 |
H14A |
90.8 |
118.7 |
O11 |
C12 |
C15 |
C13 |
243.3 |
244.6 |
O11 |
C12 |
C15 |
H12 |
121.7 |
122.3 |
C15 |
C12 |
C13 |
O13 |
140.5 |
98.6 |
C15 |
C12 |
C13 |
C14 |
258.1 |
217.2 |
C13 |
C12 |
C15 |
H12 |
238.3 |
237.7 |
C15 |
C12 |
C13 |
H13 |
19.3 |
336.0 |
O16 |
C15 |
C12 |
H15 |
240.0 |
240.0 |
O16 |
C15 |
C12 |
H15A |
120.0 |
120.0 |
C12 |
C15 |
O16 |
HO16 |
180.0 |
180.1 |
H15 |
C15 |
C12 |
H15A |
240.0 |
240.0 |
C10 |
C14 |
C13 |
O13 |
84.4 |
118.6 |
O13 |
C13 |
C12 |
C15 |
140.5 |
98.6 |
C12 |
C13 |
O13 |
C14 |
113.7 |
114.6 |
O13 |
C13 |
C12 |
H12 |
21.1 |
336.2 |
C12 |
C13 |
O13 |
H13 |
235.4 |
237.4 |
C14 |
C13 |
O13 |
H13 |
121.7 |
122.8 |
O13 |
C13 |
C14 |
H14 |
324.4 |
360.0 |
O13 |
C13 |
C14 |
H14A |
204.4 |
237.3 |
C13 |
C14 |
C10 |
H10 |
265.8 |
265.0 |
C10 |
C14 |
C13 |
H14 |
120.0 |
118.7 |
C10 |
C14 |
C13 |
H14A |
240.0 |
241.4 |
C14 |
C13 |
C12 |
C15 |
258.1 |
217.2 |
C12 |
C13 |
C14 |
O13 |
246.4 |
241.4 |
C14 |
C13 |
C12 |
H12 |
138.7 |
94.8 |
C12 |
C13 |
C14 |
H13 |
124.6 |
118.7 |
O13 |
C13 |
C14 |
H13 |
238.3 |
237.3 |
C14 |
C13 |
O13 |
HO13 |
66.3 |
65.4 |
H14 |
C14 |
C13 |
H14A |
120.0 |
122.7 |
O16 |
C15 |
C12 |
H12 |
181.7 |
304.2 |
C12 |
C15 |
O16 |
H15 |
120.0 |
120.0 |
C12 |
C15 |
O16 |
H15A |
240.0 |
239.9 |
H15 |
C15 |
O16 |
H15A |
120.0 |
119.9 |
H5 |
C5 |
N4 |
C10 |
2.3 |
360.0 |
N4 |
C5 |
H5 |
C6 |
180.0 |
179.9 |
H5 |
C5 |
C6 |
F8 |
0.9 |
359.9 |
C1 |
N7 |
HN7 |
HN7A |
180.0 |
180.0 |
C1 |
N7 |
HN7A |
HN7 |
180.0 |
180.0 |
N4 |
C10 |
H10 |
O11 |
242.2 |
237.7 |
N4 |
C10 |
H10 |
C14 |
125.2 |
122.2 |
O11 |
C10 |
H10 |
C14 |
243.1 |
244.5 |
H10 |
C10 |
O11 |
C12 |
95.9 |
78.4 |
H10 |
C10 |
C14 |
C13 |
265.8 |
265.0 |
H10 |
C10 |
C14 |
H14 |
25.8 |
23.7 |
H10 |
C10 |
C14 |
H14A |
145.8 |
146.5 |
O11 |
C12 |
H12 |
C13 |
118.5 |
115.4 |
O11 |
C12 |
H12 |
C15 |
239.3 |
237.7 |
C13 |
C12 |
H12 |
C15 |
120.8 |
122.3 |
H12 |
C12 |
C13 |
O13 |
21.1 |
336.2 |
H12 |
C12 |
C13 |
C14 |
138.7 |
94.8 |
H12 |
C12 |
C13 |
H13 |
259.9 |
213.6 |
H12 |
C12 |
C15 |
O16 |
181.7 |
304.2 |
H12 |
C12 |
C15 |
H15 |
301.7 |
64.2 |
H12 |
C12 |
C15 |
H15A |
61.8 |
184.2 |
H13 |
C13 |
C12 |
C15 |
19.3 |
336.0 |
C12 |
C13 |
H13 |
O13 |
118.7 |
122.6 |
C12 |
C13 |
H13 |
C14 |
241.2 |
245.3 |
H13 |
C13 |
C12 |
H12 |
259.9 |
213.6 |
O13 |
C13 |
H13 |
C14 |
122.5 |
122.7 |
H13 |
C13 |
O13 |
HO13 |
304.6 |
302.6 |
H13 |
C13 |
C14 |
H14 |
86.1 |
122.7 |
H13 |
C13 |
C14 |
H14A |
326.1 |
360.0 |
HO13 |
O13 |
C13 |
C14 |
66.3 |
65.4 |
HO13 |
O13 |
C13 |
H13 |
304.6 |
302.6 |
C10 |
C14 |
H14 |
C13 |
245.8 |
245.4 |
H14 |
C14 |
C10 |
H10 |
25.8 |
23.7 |
C10 |
C14 |
H14 |
H14A |
122.9 |
122.8 |
H14 |
C14 |
C13 |
H13 |
86.1 |
122.7 |
C13 |
C14 |
H14 |
H14A |
237.2 |
237.4 |
C10 |
C14 |
H14A |
C13 |
114.2 |
114.6 |
H14A |
C14 |
C10 |
H10 |
145.8 |
146.5 |
C10 |
C14 |
H14A |
H14 |
237.1 |
237.2 |
H14A |
C14 |
C13 |
H13 |
326.1 |
360.0 |
C13 |
C14 |
H14A |
H14 |
122.8 |
122.6 |
C12 |
C15 |
H15 |
O16 |
240.5 |
240.0 |
H15 |
C15 |
C12 |
H12 |
301.7 |
64.2 |
C12 |
C15 |
H15 |
H15A |
120.2 |
120.1 |
O16 |
C15 |
H15 |
H15A |
239.8 |
240.1 |
H15 |
C15 |
O16 |
HO16 |
60.0 |
60.1 |
C12 |
C15 |
H15A |
O16 |
119.5 |
120.0 |
H15A |
C15 |
C12 |
H12 |
61.8 |
184.2 |
C12 |
C15 |
H15A |
H15 |
239.8 |
239.9 |
O16 |
C15 |
H15A |
H15 |
120.2 |
119.9 |
H15A |
C15 |
O16 |
HO16 |
300.0 |
300.1 |
HO16 |
O16 |
C15 |
H15 |
60.0 |
60.1 |
HO16 |
O16 |
C15 |
H15A |
300.0 |
300.1 |