PDB Chemical Component B82
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for B82
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| S1 |
O26 |
1.451 |
1.421 |
| S1 |
C2 |
1.842 |
1.762 |
| O25 |
S1 |
1.446 |
1.421 |
| N20 |
S1 |
1.768 |
1.656 |
| N20 |
C21 |
1.575 |
1.465 |
| C23 |
N20 |
1.518 |
1.465 |
| C23 |
H23 |
1.100 |
1.090 |
| C23 |
H23A |
1.100 |
1.090 |
| C24 |
C23 |
1.539 |
1.529 |
| C24 |
H24 |
1.100 |
1.090 |
| C24 |
H24A |
1.100 |
1.090 |
| C24 |
H24B |
1.100 |
1.090 |
| C21 |
H21 |
1.100 |
1.090 |
| C22 |
C21 |
1.542 |
1.530 |
| C22 |
H22 |
1.100 |
1.090 |
| C22 |
H22A |
1.100 |
1.090 |
| C2 |
C18 |
1.495 |
1.385 |
| C18 |
C17 |
1.453 |
1.385 |
| C18 |
BR |
1.914 |
1.891 |
| C17 |
H17 |
1.080 |
1.080 |
| C16 |
C17 |
1.419 |
1.379 |
| C16 |
H16 |
1.080 |
1.080 |
| C4 |
C16 |
1.446 |
1.396 |
| C5 |
C4 |
1.486 |
1.477 |
| C5 |
N6 |
1.406 |
1.348 |
| O15 |
C5 |
1.235 |
1.216 |
| N6 |
HN6 |
0.999 |
0.970 |
| C7 |
N6 |
1.438 |
1.392 |
| C7 |
C8 |
1.483 |
1.404 |
| C14 |
C7 |
1.454 |
1.388 |
| C14 |
H14 |
1.080 |
1.079 |
| C13 |
C14 |
1.423 |
1.381 |
| C13 |
C12 |
1.426 |
1.385 |
| C13 |
H13 |
1.080 |
1.080 |
| C12 |
C11 |
1.431 |
1.378 |
| C12 |
H12 |
1.080 |
1.080 |
| C11 |
C8 |
1.459 |
1.397 |
| C11 |
H11 |
1.080 |
1.081 |
| C8 |
C9 |
1.535 |
1.473 |
| C9 |
O45 |
1.271 |
1.216 |
| C9 |
O10 |
1.272 |
1.347 |
| O10 |
HO10 |
0.950 |
0.966 |
| C3 |
C2 |
1.448 |
1.379 |
| C3 |
C4 |
1.451 |
1.397 |
| C3 |
H3 |
1.080 |
1.079 |
| C21 |
H18 |
1.100 |
1.090 |
| C22 |
H19 |
1.100 |
1.090 |
Bond Angles for B82
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O26 |
S1 |
C2 |
106.8 |
106.4 |
| O25 |
S1 |
C2 |
105.8 |
106.4 |
| N20 |
S1 |
C2 |
108.6 |
107.2 |
| S1 |
C2 |
C18 |
125.7 |
119.9 |
| C23 |
N20 |
C21 |
113.2 |
120.0 |
| N20 |
C21 |
H21 |
106.2 |
109.5 |
| N20 |
C21 |
H18 |
106.2 |
109.5 |
| H23 |
C23 |
H23A |
110.8 |
109.5 |
| C24 |
C23 |
H23 |
108.1 |
109.5 |
| C24 |
C23 |
H23A |
108.1 |
109.5 |
| H24 |
C24 |
H24A |
109.4 |
109.5 |
| H24 |
C24 |
H24B |
109.5 |
109.4 |
| H24A |
C24 |
H24B |
109.5 |
109.4 |
| C22 |
C21 |
H21 |
106.2 |
109.5 |
| H21 |
C21 |
H18 |
112.5 |
109.5 |
| C22 |
C21 |
H18 |
106.2 |
109.5 |
| H22 |
C22 |
H22A |
109.4 |
109.5 |
| H22 |
C22 |
H19 |
109.5 |
109.5 |
| H22A |
C22 |
H19 |
109.5 |
109.4 |
| C2 |
C18 |
C17 |
119.8 |
120.2 |
| C2 |
C18 |
BR |
127.4 |
119.9 |
| BR |
C18 |
C17 |
112.8 |
119.9 |
| C18 |
C17 |
H17 |
119.5 |
119.9 |
| C16 |
C17 |
H17 |
119.5 |
119.9 |
| C4 |
C16 |
H16 |
119.9 |
120.1 |
| O15 |
C5 |
N6 |
128.3 |
120.0 |
| C5 |
N6 |
HN6 |
115.3 |
120.0 |
| C7 |
N6 |
HN6 |
115.3 |
120.0 |
| C14 |
C7 |
C8 |
118.5 |
119.7 |
| C7 |
C8 |
C11 |
118.1 |
119.6 |
| C7 |
C8 |
C9 |
124.5 |
120.3 |
| C13 |
C14 |
H14 |
119.2 |
120.0 |
| C12 |
C13 |
H13 |
120.0 |
119.8 |
| C13 |
C12 |
C11 |
120.5 |
120.3 |
| C13 |
C12 |
H12 |
119.8 |
119.9 |
| C11 |
C12 |
H12 |
119.8 |
119.8 |
| C12 |
C11 |
C8 |
121.3 |
119.9 |
| C12 |
C11 |
H11 |
119.4 |
120.0 |
| C8 |
C11 |
H11 |
119.4 |
120.0 |
| C11 |
C8 |
C9 |
117.5 |
120.2 |
| C8 |
C9 |
O45 |
117.8 |
120.0 |
| C8 |
C9 |
O10 |
117.8 |
120.1 |
| O45 |
C9 |
O10 |
124.4 |
120.0 |
| C9 |
O10 |
HO10 |
109.5 |
117.0 |
Torsion Angles for B82
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O25 |
S1 |
O26 |
C2 |
241.9 |
122.9 |
| N20 |
S1 |
O26 |
C2 |
117.1 |
245.9 |
| O26 |
S1 |
C2 |
C18 |
30.6 |
51.6 |
| S1 |
C2 |
C18 |
C17 |
180.0 |
180.0 |
| S1 |
C2 |
C18 |
BR |
0.2 |
0.0 |
| O26 |
S1 |
O25 |
C2 |
118.7 |
237.0 |
| N20 |
S1 |
O25 |
C2 |
243.2 |
114.0 |
| O25 |
S1 |
C2 |
C18 |
155.7 |
278.6 |
| O26 |
S1 |
N20 |
C2 |
244.0 |
113.5 |
| O25 |
S1 |
N20 |
C2 |
115.0 |
246.5 |
| N20 |
S1 |
C2 |
C18 |
273.1 |
165.1 |
| C21 |
N20 |
S1 |
C2 |
64.2 |
94.1 |
| C22 |
C21 |
N20 |
H21 |
240.0 |
240.0 |
| H21 |
C21 |
N20 |
H18 |
240.0 |
240.0 |
| C22 |
C21 |
N20 |
H18 |
120.0 |
120.0 |
| C23 |
N20 |
S1 |
C2 |
295.6 |
274.1 |
| C23 |
N20 |
C21 |
H21 |
120.5 |
39.0 |
| C23 |
N20 |
C21 |
H18 |
240.5 |
159.0 |
| H23 |
C23 |
N20 |
C21 |
240.1 |
35.0 |
| C24 |
C23 |
H23 |
H23A |
241.7 |
239.9 |
| H23A |
C23 |
N20 |
C21 |
0.2 |
155.0 |
| C24 |
C23 |
H23A |
H23 |
118.3 |
120.0 |
| C24 |
C23 |
N20 |
C21 |
120.1 |
275.0 |
| H23 |
C23 |
C24 |
H23A |
120.0 |
120.1 |
| H24 |
C24 |
C23 |
H23 |
60.0 |
300.0 |
| H24 |
C24 |
C23 |
H23A |
300.0 |
179.9 |
| H24A |
C24 |
H24 |
H24B |
120.0 |
119.9 |
| H24A |
C24 |
C23 |
H23 |
180.0 |
60.0 |
| H24A |
C24 |
C23 |
H23A |
60.0 |
300.0 |
| H24 |
C24 |
H24A |
H24B |
240.0 |
240.1 |
| H24B |
C24 |
C23 |
H23 |
300.0 |
180.0 |
| H24B |
C24 |
C23 |
H23A |
180.0 |
60.0 |
| H24 |
C24 |
H24B |
H24A |
120.0 |
120.0 |
| N20 |
C21 |
H21 |
H18 |
115.8 |
120.0 |
| C22 |
C21 |
H21 |
H18 |
244.2 |
240.0 |
| N20 |
C21 |
C22 |
H21 |
120.0 |
120.0 |
| N20 |
C21 |
C22 |
H18 |
240.0 |
240.0 |
| H21 |
C21 |
C22 |
H18 |
120.0 |
120.0 |
| H22 |
C22 |
C21 |
H21 |
60.0 |
180.0 |
| H22 |
C22 |
C21 |
H18 |
300.0 |
60.0 |
| H22A |
C22 |
H22 |
H19 |
120.0 |
119.9 |
| H22A |
C22 |
C21 |
H21 |
180.0 |
300.0 |
| H22A |
C22 |
C21 |
H18 |
60.0 |
180.0 |
| H22 |
C22 |
H22A |
H19 |
240.0 |
240.0 |
| BR |
C18 |
C2 |
C17 |
180.1 |
180.1 |
| C2 |
C18 |
C17 |
H17 |
179.9 |
180.1 |
| C2 |
C18 |
C17 |
BR |
180.1 |
180.1 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
180.1 |
| C2 |
C18 |
BR |
C17 |
179.9 |
179.9 |
| BR |
C18 |
C17 |
H17 |
359.8 |
360.0 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
179.9 |
| H16 |
C16 |
C17 |
H17 |
360.0 |
0.0 |
| C4 |
C16 |
C17 |
H17 |
180.0 |
180.0 |
| C5 |
C4 |
C16 |
H16 |
0.6 |
360.0 |
| C7 |
N6 |
C5 |
HN6 |
180.0 |
179.9 |
| O15 |
C5 |
N6 |
HN6 |
179.9 |
175.1 |
| C5 |
N6 |
C7 |
HN6 |
180.0 |
180.1 |
| C8 |
C7 |
N6 |
HN6 |
359.7 |
333.9 |
| C12 |
C11 |
C8 |
C7 |
0.0 |
0.5 |
| C7 |
C8 |
C11 |
H11 |
180.0 |
180.3 |
| C11 |
C8 |
C7 |
C9 |
180.0 |
179.8 |
| C7 |
C8 |
C9 |
O45 |
346.8 |
4.8 |
| C7 |
C8 |
C9 |
O10 |
166.8 |
184.8 |
| C14 |
C7 |
N6 |
HN6 |
179.8 |
154.2 |
| C14 |
C7 |
C8 |
C11 |
0.1 |
359.5 |
| C14 |
C7 |
C8 |
C9 |
180.1 |
179.7 |
| H14 |
C14 |
C7 |
C8 |
179.9 |
180.2 |
| C13 |
C14 |
C7 |
C8 |
359.9 |
0.2 |
| C12 |
C13 |
C14 |
H14 |
180.0 |
180.0 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
180.1 |
| C13 |
C12 |
C11 |
C8 |
359.9 |
359.7 |
| C13 |
C12 |
C11 |
H11 |
179.9 |
180.0 |
| H13 |
C13 |
C14 |
H14 |
360.0 |
360.0 |
| H13 |
C13 |
C12 |
C11 |
180.2 |
180.0 |
| H13 |
C13 |
C12 |
H12 |
0.2 |
360.0 |
| C7 |
C8 |
C11 |
C12 |
0.0 |
0.5 |
| C11 |
C12 |
C13 |
H13 |
180.2 |
180.0 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
179.9 |
| C8 |
C11 |
C12 |
H11 |
180.0 |
179.8 |
| C12 |
C11 |
C8 |
C9 |
180.0 |
180.3 |
| H12 |
C12 |
C13 |
H13 |
0.2 |
360.0 |
| C13 |
C12 |
H12 |
C11 |
180.0 |
180.1 |
| H12 |
C12 |
C11 |
C8 |
179.9 |
179.8 |
| H12 |
C12 |
C11 |
H11 |
359.9 |
0.0 |
| C7 |
C8 |
C11 |
C9 |
180.0 |
180.2 |
| C8 |
C11 |
C12 |
H12 |
179.9 |
179.8 |
| C12 |
C11 |
C8 |
H11 |
180.0 |
180.2 |
| C11 |
C8 |
C9 |
O45 |
166.8 |
185.1 |
| C11 |
C8 |
C9 |
O10 |
346.8 |
5.0 |
| H11 |
C11 |
C12 |
H12 |
359.9 |
0.0 |
| C12 |
C11 |
H11 |
C8 |
180.0 |
179.8 |
| H11 |
C11 |
C8 |
C9 |
0.0 |
0.1 |
| C7 |
C8 |
C9 |
C11 |
180.0 |
179.8 |
| C9 |
C8 |
C11 |
H11 |
0.0 |
0.1 |
| O45 |
C9 |
C8 |
O10 |
180.0 |
180.1 |
| C8 |
C9 |
O10 |
HO10 |
180.1 |
180.0 |
| C8 |
C9 |
O45 |
O10 |
180.0 |
179.9 |
| O45 |
C9 |
O10 |
HO10 |
0.0 |
359.9 |
| C8 |
C9 |
O10 |
O45 |
180.0 |
180.1 |
| C3 |
C4 |
C16 |
H16 |
180.2 |
179.7 |
| N20 |
C21 |
H18 |
H21 |
244.2 |
240.0 |
| C22 |
C21 |
H18 |
H21 |
115.8 |
120.0 |
| H19 |
C22 |
C21 |
H21 |
300.0 |
60.0 |
| H19 |
C22 |
C21 |
H18 |
180.0 |
300.0 |
| H22 |
C22 |
H19 |
H22A |
120.0 |
120.0 |