PDB Chemical Component B72
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for B72
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C20 |
O2 |
1.240 |
1.208 |
| C20 |
O1 |
1.252 |
1.342 |
| C19 |
C20 |
1.490 |
1.507 |
| C19 |
H119 |
1.100 |
1.090 |
| C19 |
H219 |
1.100 |
1.090 |
| O3 |
C19 |
1.432 |
1.429 |
| C1 |
O3 |
1.360 |
1.359 |
| C2 |
C1 |
1.367 |
1.387 |
| C2 |
H2 |
1.080 |
1.080 |
| C3 |
C2 |
1.397 |
1.382 |
| C17 |
C3 |
1.507 |
1.507 |
| C17 |
H117 |
1.100 |
1.089 |
| C17 |
H217 |
1.100 |
1.090 |
| C17 |
H317 |
1.100 |
1.091 |
| C4 |
C5 |
1.491 |
1.382 |
| C4 |
C3 |
1.479 |
1.382 |
| C5 |
C6 |
1.380 |
1.382 |
| C6 |
C1 |
1.395 |
1.387 |
| C6 |
H6 |
1.080 |
1.081 |
| C18 |
C5 |
1.504 |
1.508 |
| C18 |
H118 |
1.100 |
1.090 |
| C18 |
H218 |
1.100 |
1.090 |
| C18 |
H318 |
1.100 |
1.091 |
| C7 |
C4 |
1.517 |
1.507 |
| C7 |
H17 |
1.100 |
1.090 |
| C7 |
H27 |
1.100 |
1.089 |
| C8 |
C9 |
1.396 |
1.383 |
| C8 |
C7 |
1.502 |
1.507 |
| C13 |
C8 |
1.391 |
1.383 |
| C13 |
H13 |
1.080 |
1.079 |
| C12 |
C11 |
1.487 |
1.387 |
| C12 |
C13 |
1.393 |
1.382 |
| C14 |
C12 |
1.503 |
1.507 |
| C14 |
C15 |
1.527 |
1.530 |
| C14 |
H14 |
1.100 |
1.090 |
| C16 |
C14 |
1.513 |
1.530 |
| C16 |
H116 |
1.100 |
1.090 |
| C16 |
H216 |
1.100 |
1.089 |
| C16 |
H316 |
1.101 |
1.091 |
| C15 |
H115 |
1.100 |
1.091 |
| C15 |
H215 |
1.099 |
1.090 |
| C15 |
H315 |
1.100 |
1.090 |
| C11 |
C10 |
1.390 |
1.388 |
| O4 |
C11 |
1.338 |
1.359 |
| O4 |
HO4 |
0.950 |
0.967 |
| C10 |
C9 |
1.384 |
1.381 |
| C10 |
H10 |
1.080 |
1.080 |
| C9 |
H9 |
1.080 |
1.079 |
| O1 |
H24 |
0.950 |
0.968 |
Bond Angles for B72
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C20 |
O1 |
H24 |
109.5 |
117.0 |
| H119 |
C19 |
H219 |
107.3 |
109.5 |
| O3 |
C19 |
H119 |
110.5 |
109.5 |
| O3 |
C19 |
H219 |
111.1 |
109.4 |
| C3 |
C2 |
H2 |
119.8 |
120.1 |
| H117 |
C17 |
H217 |
109.4 |
109.5 |
| H117 |
C17 |
H317 |
109.5 |
109.4 |
| H217 |
C17 |
H317 |
109.5 |
109.5 |
| C4 |
C5 |
C6 |
117.0 |
120.1 |
| C5 |
C6 |
H6 |
118.5 |
120.0 |
| H118 |
C18 |
H218 |
109.5 |
109.5 |
| H118 |
C18 |
H318 |
109.5 |
109.5 |
| H218 |
C18 |
H318 |
109.5 |
109.5 |
| H17 |
C7 |
H27 |
121.3 |
109.5 |
| C8 |
C7 |
H17 |
105.0 |
109.4 |
| C8 |
C7 |
H27 |
101.7 |
109.5 |
| C13 |
C8 |
C9 |
122.7 |
120.1 |
| C8 |
C9 |
C10 |
119.6 |
120.0 |
| C8 |
C9 |
H9 |
120.2 |
120.0 |
| C12 |
C13 |
H13 |
120.2 |
120.0 |
| C14 |
C12 |
C11 |
120.0 |
120.0 |
| C12 |
C11 |
C10 |
120.0 |
119.9 |
| C15 |
C14 |
H14 |
110.4 |
109.5 |
| C16 |
C14 |
C15 |
111.1 |
109.4 |
| C14 |
C15 |
H115 |
109.5 |
109.4 |
| C14 |
C15 |
H215 |
109.4 |
109.5 |
| C14 |
C15 |
H315 |
109.5 |
109.5 |
| C16 |
C14 |
H14 |
105.2 |
109.5 |
| H116 |
C16 |
H216 |
109.5 |
109.5 |
| H116 |
C16 |
H316 |
109.4 |
109.4 |
| H216 |
C16 |
H316 |
109.5 |
109.4 |
| H115 |
C15 |
H215 |
109.5 |
109.4 |
| H115 |
C15 |
H315 |
109.5 |
109.5 |
| H215 |
C15 |
H315 |
109.5 |
109.5 |
| O4 |
C11 |
C10 |
119.4 |
120.0 |
| C11 |
C10 |
C9 |
120.2 |
119.9 |
| C11 |
C10 |
H10 |
119.9 |
120.0 |
| C9 |
C10 |
H10 |
119.9 |
120.1 |
| C10 |
C9 |
H9 |
120.2 |
119.9 |
Torsion Angles for B72
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
C20 |
O1 |
H24 |
360.0 |
0.1 |
| C19 |
C20 |
O1 |
H24 |
180.4 |
180.0 |
| O3 |
C19 |
H119 |
H219 |
238.8 |
240.0 |
| O3 |
C19 |
H219 |
H119 |
120.8 |
120.0 |
| H119 |
C19 |
O3 |
H219 |
118.9 |
120.0 |
| C1 |
O3 |
C19 |
H119 |
54.6 |
60.0 |
| C1 |
O3 |
C19 |
H219 |
295.6 |
300.0 |
| C17 |
C3 |
C2 |
H2 |
358.7 |
0.0 |
| H217 |
C17 |
H117 |
H317 |
120.0 |
120.0 |
| H117 |
C17 |
H217 |
H317 |
240.0 |
240.0 |
| H117 |
C17 |
H317 |
H217 |
120.0 |
120.0 |
| C4 |
C5 |
C6 |
H6 |
180.5 |
180.0 |
| C4 |
C3 |
C2 |
H2 |
180.3 |
180.1 |
| C18 |
C5 |
C6 |
H6 |
358.4 |
359.7 |
| H218 |
C18 |
H118 |
H318 |
120.0 |
120.0 |
| H118 |
C18 |
H218 |
H318 |
240.0 |
240.0 |
| H118 |
C18 |
H318 |
H218 |
120.0 |
120.0 |
| C8 |
C7 |
H17 |
H27 |
245.8 |
240.0 |
| C8 |
C7 |
H27 |
H17 |
115.9 |
120.0 |
| C9 |
C8 |
C7 |
H17 |
289.1 |
329.3 |
| C9 |
C8 |
C7 |
H27 |
161.9 |
209.4 |
| C11 |
C10 |
C9 |
C8 |
0.3 |
0.0 |
| C8 |
C9 |
C10 |
H10 |
180.3 |
180.0 |
| C10 |
C9 |
C8 |
H9 |
180.0 |
180.3 |
| H17 |
C7 |
C8 |
H27 |
127.2 |
120.0 |
| C13 |
C8 |
C7 |
H17 |
104.0 |
149.6 |
| C13 |
C8 |
C7 |
H27 |
336.8 |
29.6 |
| C13 |
C8 |
C9 |
C10 |
1.8 |
360.0 |
| C13 |
C8 |
C9 |
H9 |
181.8 |
179.7 |
| H13 |
C13 |
C8 |
C9 |
177.5 |
180.0 |
| C11 |
C12 |
C13 |
H13 |
181.1 |
180.0 |
| O4 |
C11 |
C12 |
C10 |
180.7 |
180.1 |
| C12 |
C11 |
C10 |
C9 |
358.4 |
0.0 |
| C12 |
C11 |
C10 |
H10 |
178.4 |
180.0 |
| C12 |
C13 |
C8 |
C9 |
357.5 |
360.0 |
| C14 |
C12 |
C13 |
H13 |
4.1 |
359.9 |
| C14 |
C12 |
C11 |
C10 |
178.0 |
180.0 |
| C15 |
C14 |
C12 |
C11 |
249.7 |
239.9 |
| C16 |
C14 |
C15 |
H14 |
243.7 |
240.0 |
| H115 |
C15 |
C14 |
H215 |
240.0 |
240.0 |
| H115 |
C15 |
C14 |
H315 |
120.0 |
120.0 |
| H215 |
C15 |
C14 |
H315 |
240.0 |
240.0 |
| H14 |
C14 |
C12 |
C11 |
9.3 |
359.9 |
| C16 |
C14 |
H14 |
C15 |
119.9 |
120.0 |
| H14 |
C14 |
C15 |
H115 |
260.2 |
300.0 |
| H14 |
C14 |
C15 |
H215 |
20.2 |
60.0 |
| H14 |
C14 |
C15 |
H315 |
140.2 |
180.0 |
| C16 |
C14 |
C12 |
C11 |
125.4 |
120.0 |
| C15 |
C14 |
C16 |
H14 |
119.4 |
120.0 |
| C16 |
C14 |
C15 |
H115 |
143.9 |
180.0 |
| C16 |
C14 |
C15 |
H215 |
263.9 |
299.9 |
| C16 |
C14 |
C15 |
H315 |
23.9 |
60.0 |
| H116 |
C16 |
C14 |
C15 |
288.1 |
300.0 |
| H116 |
C16 |
C14 |
H14 |
168.7 |
179.9 |
| H216 |
C16 |
H116 |
H316 |
120.0 |
119.9 |
| H216 |
C16 |
C14 |
C15 |
48.1 |
60.1 |
| H216 |
C16 |
C14 |
H14 |
288.7 |
300.0 |
| H116 |
C16 |
H216 |
H316 |
240.0 |
240.1 |
| H316 |
C16 |
C14 |
C15 |
168.2 |
180.0 |
| H316 |
C16 |
C14 |
H14 |
48.7 |
60.0 |
| H116 |
C16 |
H316 |
H216 |
120.0 |
120.0 |
| H115 |
C15 |
C14 |
H14 |
260.2 |
300.0 |
| C14 |
C15 |
H115 |
H215 |
120.0 |
120.0 |
| C14 |
C15 |
H115 |
H315 |
240.0 |
240.0 |
| H215 |
C15 |
H115 |
H315 |
120.0 |
120.0 |
| H215 |
C15 |
C14 |
H14 |
20.2 |
60.0 |
| C14 |
C15 |
H215 |
H115 |
240.0 |
240.0 |
| C14 |
C15 |
H215 |
H315 |
120.0 |
120.0 |
| H115 |
C15 |
H215 |
H315 |
240.0 |
240.0 |
| H315 |
C15 |
C14 |
H14 |
140.2 |
180.0 |
| C14 |
C15 |
H315 |
H115 |
120.0 |
120.0 |
| C14 |
C15 |
H315 |
H215 |
240.0 |
240.0 |
| H115 |
C15 |
H315 |
H215 |
120.0 |
120.0 |
| C8 |
C9 |
C10 |
C11 |
0.3 |
0.0 |
| C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
| C11 |
C10 |
C9 |
H9 |
180.3 |
180.3 |
| C12 |
C11 |
O4 |
C10 |
179.3 |
179.9 |
| O4 |
C11 |
C10 |
C9 |
177.7 |
179.9 |
| O4 |
C11 |
C10 |
H10 |
357.7 |
360.0 |
| HO4 |
O4 |
C11 |
C10 |
121.8 |
270.0 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
179.7 |
| C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
| C11 |
C10 |
H10 |
C9 |
180.0 |
180.0 |
| H10 |
C10 |
C9 |
H9 |
0.3 |
0.3 |
| C8 |
C9 |
H9 |
C10 |
180.0 |
180.3 |
| H9 |
C9 |
C10 |
H10 |
0.3 |
0.3 |