PDB Chemical Component B6A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for B6A
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAK |
NAQ |
1.469 |
1.468 |
| CAK |
CAM |
1.524 |
1.530 |
| NAQ |
CAL |
1.460 |
1.468 |
| CAM |
CAX |
1.523 |
1.531 |
| CAL |
CAN |
1.525 |
1.530 |
| CAX |
CAN |
1.541 |
1.531 |
| CAX |
CAO |
1.519 |
1.530 |
| NAA |
CAU |
1.329 |
1.377 |
| NAP |
CAU |
1.335 |
1.312 |
| NAP |
CAV |
1.333 |
1.349 |
| CAU |
NAY |
1.316 |
1.365 |
| CAV |
CAI |
1.391 |
1.400 |
| CAV |
CAW |
1.390 |
1.409 |
| NAY |
CAO |
1.472 |
1.465 |
| NAY |
CAW |
1.324 |
1.387 |
| CAI |
CAH |
1.395 |
1.362 |
| CAW |
CAJ |
1.387 |
1.380 |
| CAH |
CAT |
1.391 |
1.402 |
| OAB |
CAR |
1.233 |
1.217 |
| CAJ |
CAT |
1.389 |
1.398 |
| CAT |
CAR |
1.511 |
1.473 |
| CAR |
CAS |
1.523 |
1.478 |
| CAF |
CAS |
1.389 |
1.397 |
| CAF |
CAD |
1.392 |
1.378 |
| CAS |
CAG |
1.389 |
1.396 |
| CAD |
CAC |
1.396 |
1.384 |
| CAG |
CAE |
1.382 |
1.380 |
| CAC |
CAE |
1.388 |
1.384 |
| CAM |
H1 |
1.100 |
1.090 |
| CAM |
H2 |
1.100 |
1.090 |
| CAK |
H3 |
1.100 |
1.090 |
| CAK |
H4 |
1.100 |
1.090 |
| NAQ |
H5 |
1.000 |
1.009 |
| CAL |
H7 |
1.101 |
1.090 |
| CAL |
H8 |
1.100 |
1.090 |
| CAN |
H9 |
1.100 |
1.090 |
| CAN |
H10 |
1.100 |
1.091 |
| CAX |
H11 |
1.100 |
1.090 |
| CAO |
H12 |
1.100 |
1.090 |
| CAO |
H13 |
1.100 |
1.090 |
| CAJ |
H14 |
1.080 |
1.080 |
| NAA |
H15 |
1.000 |
0.970 |
| NAA |
H16 |
1.000 |
0.970 |
| CAI |
H17 |
1.080 |
1.080 |
| CAH |
H18 |
1.080 |
1.080 |
| CAF |
H19 |
1.080 |
1.080 |
| CAD |
H20 |
1.080 |
1.080 |
| CAC |
H21 |
1.080 |
1.080 |
| CAE |
H22 |
1.079 |
1.079 |
| CAG |
H23 |
1.080 |
1.080 |
Bond Angles for B6A
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAK |
NAQ |
CAL |
109.8 |
111.2 |
| NAQ |
CAK |
H3 |
109.7 |
109.5 |
| NAQ |
CAK |
H4 |
109.7 |
109.4 |
| CAK |
NAQ |
H5 |
109.4 |
111.0 |
| CAK |
CAM |
CAX |
110.0 |
109.3 |
| CAK |
CAM |
H1 |
109.4 |
109.5 |
| CAK |
CAM |
H2 |
109.3 |
109.5 |
| NAQ |
CAL |
CAN |
108.2 |
109.5 |
| CAL |
NAQ |
H5 |
109.4 |
111.0 |
| NAQ |
CAL |
H7 |
109.8 |
109.5 |
| NAQ |
CAL |
H8 |
109.8 |
109.4 |
| CAM |
CAX |
CAN |
111.4 |
109.2 |
| CAM |
CAX |
CAO |
108.8 |
109.5 |
| CAX |
CAM |
H1 |
109.3 |
109.5 |
| CAX |
CAM |
H2 |
109.3 |
109.5 |
| CAM |
CAX |
H11 |
109.5 |
109.5 |
| CAN |
CAL |
H7 |
109.8 |
109.5 |
| CAN |
CAL |
H8 |
109.8 |
109.5 |
| CAL |
CAN |
H9 |
109.0 |
109.5 |
| CAL |
CAN |
H10 |
109.0 |
109.5 |
| CAX |
CAN |
H9 |
109.0 |
109.5 |
| CAX |
CAN |
H10 |
109.0 |
109.5 |
| CAO |
CAX |
H11 |
109.6 |
109.6 |
| CAX |
CAO |
H12 |
108.5 |
109.5 |
| CAX |
CAO |
H13 |
108.5 |
109.5 |
| NAP |
CAV |
CAI |
132.7 |
133.2 |
| CAV |
CAI |
CAH |
120.0 |
120.1 |
| CAV |
CAI |
H17 |
120.0 |
119.9 |
| NAY |
CAO |
H12 |
108.5 |
109.5 |
| NAY |
CAO |
H13 |
108.5 |
109.4 |
| NAY |
CAW |
CAJ |
133.1 |
133.9 |
| CAI |
CAH |
CAT |
119.7 |
120.5 |
| CAH |
CAI |
H17 |
120.0 |
119.9 |
| CAI |
CAH |
H18 |
120.2 |
119.8 |
| CAW |
CAJ |
CAT |
119.9 |
119.6 |
| CAW |
CAJ |
H14 |
120.1 |
120.2 |
| CAJ |
CAT |
CAH |
120.3 |
120.0 |
| CAH |
CAT |
CAR |
121.4 |
120.0 |
| CAT |
CAH |
H18 |
120.1 |
119.7 |
| OAB |
CAR |
CAS |
120.6 |
120.0 |
| CAJ |
CAT |
CAR |
118.3 |
120.0 |
| CAT |
CAJ |
H14 |
120.1 |
120.2 |
| CAT |
CAR |
CAS |
120.0 |
120.0 |
| CAR |
CAS |
CAG |
119.7 |
120.2 |
| CAF |
CAS |
CAG |
120.4 |
119.7 |
| CAF |
CAD |
CAC |
119.3 |
120.2 |
| CAD |
CAF |
H19 |
120.0 |
120.1 |
| CAF |
CAD |
H20 |
120.3 |
120.0 |
| CAS |
CAG |
CAE |
119.8 |
119.9 |
| CAS |
CAG |
H23 |
120.1 |
120.1 |
| CAD |
CAC |
CAE |
120.3 |
120.3 |
| CAC |
CAD |
H20 |
120.3 |
119.9 |
| CAD |
CAC |
H21 |
119.9 |
119.8 |
| CAG |
CAE |
H22 |
119.9 |
120.0 |
| CAE |
CAC |
H21 |
119.8 |
119.9 |
| CAC |
CAE |
H22 |
119.9 |
119.9 |
| H1 |
CAM |
H2 |
109.4 |
109.5 |
| H3 |
CAK |
H4 |
109.5 |
109.4 |
| H7 |
CAL |
H8 |
109.5 |
109.5 |
| H9 |
CAN |
H10 |
109.5 |
109.5 |
| H12 |
CAO |
H13 |
109.5 |
109.4 |
| H15 |
NAA |
H16 |
109.4 |
120.0 |
Torsion Angles for B6A
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| NAQ |
CAK |
CAM |
CAX |
58.9 |
59.1 |
| NAQ |
CAK |
CAM |
H1 |
179.0 |
179.1 |
| NAQ |
CAK |
CAM |
H2 |
298.8 |
299.2 |
| CAK |
NAQ |
CAL |
CAN |
66.0 |
61.7 |
| CAL |
NAQ |
CAK |
H5 |
240.0 |
235.9 |
| CAK |
NAQ |
CAL |
H7 |
185.8 |
181.7 |
| CAK |
NAQ |
CAL |
H8 |
306.2 |
301.7 |
| H3 |
CAK |
NAQ |
H4 |
239.7 |
119.9 |
| CAK |
CAM |
CAX |
CAN |
309.1 |
302.3 |
| CAK |
CAM |
CAX |
CAO |
189.8 |
182.4 |
| CAX |
CAM |
CAK |
H1 |
239.9 |
240.0 |
| CAX |
CAM |
CAK |
H2 |
120.1 |
120.0 |
| CAK |
CAM |
CAX |
H11 |
70.1 |
62.3 |
| H1 |
CAM |
CAK |
H2 |
240.2 |
239.9 |
| CAL |
NAQ |
CAK |
H3 |
52.1 |
178.2 |
| CAL |
NAQ |
CAK |
H4 |
172.4 |
58.3 |
| CAK |
NAQ |
CAL |
H5 |
120.1 |
124.1 |
| CAN |
CAL |
NAQ |
H7 |
240.2 |
240.0 |
| CAN |
CAL |
NAQ |
H8 |
119.8 |
120.0 |
| NAQ |
CAL |
CAN |
H9 |
63.7 |
60.8 |
| NAQ |
CAL |
CAN |
H10 |
183.1 |
180.8 |
| H7 |
CAL |
NAQ |
H8 |
239.6 |
240.0 |
| CAK |
CAM |
CAX |
H1 |
120.1 |
120.0 |
| CAK |
CAM |
CAX |
H2 |
239.9 |
240.1 |
| CAM |
CAX |
CAN |
H9 |
289.9 |
297.7 |
| CAM |
CAX |
CAN |
H10 |
170.5 |
177.6 |
| CAO |
CAX |
CAM |
H11 |
119.7 |
120.2 |
| CAM |
CAX |
CAO |
H12 |
49.2 |
305.0 |
| CAM |
CAX |
CAO |
H13 |
168.1 |
65.0 |
| H1 |
CAM |
CAX |
H2 |
119.8 |
120.1 |
| CAN |
CAL |
NAQ |
H5 |
305.9 |
297.6 |
| NAQ |
CAL |
CAN |
H7 |
119.8 |
120.0 |
| NAQ |
CAL |
CAN |
H8 |
240.2 |
240.0 |
| CAM |
CAX |
CAN |
CAL |
50.2 |
57.7 |
| CAX |
CAN |
CAL |
H9 |
239.7 |
240.0 |
| CAX |
CAN |
CAL |
H10 |
120.3 |
120.0 |
| H7 |
CAL |
CAN |
H8 |
120.4 |
120.0 |
| H9 |
CAN |
CAL |
H10 |
240.6 |
240.0 |
| CAM |
CAX |
CAN |
CAO |
240.4 |
240.1 |
| CAN |
CAX |
CAM |
H1 |
189.0 |
182.4 |
| CAN |
CAX |
CAM |
H2 |
69.3 |
62.3 |
| CAM |
CAX |
CAN |
H11 |
121.1 |
119.9 |
| CAX |
CAN |
CAL |
H7 |
183.6 |
180.8 |
| CAX |
CAN |
CAL |
H8 |
63.2 |
60.8 |
| CAL |
CAN |
CAX |
H9 |
120.3 |
120.0 |
| CAL |
CAN |
CAX |
H10 |
239.7 |
240.1 |
| H9 |
CAN |
CAX |
H10 |
119.5 |
120.1 |
| CAM |
CAX |
CAO |
CAN |
121.2 |
119.7 |
| CAO |
CAX |
CAM |
H1 |
69.7 |
62.5 |
| CAO |
CAX |
CAM |
H2 |
309.9 |
302.4 |
| CAM |
CAX |
CAO |
H11 |
240.3 |
239.9 |
| CAO |
CAX |
CAN |
H9 |
49.5 |
57.6 |
| CAO |
CAX |
CAN |
H10 |
290.1 |
297.5 |
| NAY |
CAO |
CAX |
H12 |
239.4 |
240.0 |
| NAY |
CAO |
CAX |
H13 |
120.5 |
120.0 |
| H12 |
CAO |
CAX |
H13 |
241.1 |
240.0 |
| NAP |
CAV |
CAI |
CAH |
179.8 |
180.1 |
| NAP |
CAV |
CAI |
H17 |
359.8 |
360.0 |
| CAU |
NAY |
CAO |
H12 |
346.1 |
149.7 |
| CAU |
NAY |
CAO |
H13 |
227.2 |
29.8 |
| CAV |
CAI |
CAH |
CAT |
359.7 |
0.3 |
| CAH |
CAI |
CAV |
H17 |
180.0 |
180.1 |
| CAV |
CAI |
CAH |
H18 |
179.7 |
179.9 |
| CAV |
CAW |
CAJ |
CAT |
0.6 |
359.9 |
| CAV |
CAW |
CAJ |
H14 |
180.6 |
179.9 |
| NAY |
CAO |
CAX |
H11 |
48.3 |
305.1 |
| CAX |
CAO |
NAY |
H12 |
120.5 |
120.1 |
| CAX |
CAO |
NAY |
H13 |
239.4 |
240.0 |
| H12 |
CAO |
NAY |
H13 |
118.9 |
119.9 |
| CAW |
NAY |
CAO |
H12 |
165.6 |
329.9 |
| CAW |
NAY |
CAO |
H13 |
46.7 |
210.0 |
| NAY |
CAW |
CAJ |
CAT |
180.8 |
180.0 |
| NAY |
CAW |
CAJ |
H14 |
0.8 |
0.0 |
| CAV |
CAI |
CAH |
H17 |
180.0 |
179.9 |
| CAJ |
CAT |
CAH |
CAI |
0.3 |
359.5 |
| CAI |
CAH |
CAT |
CAR |
179.4 |
179.9 |
| CAT |
CAH |
CAI |
H18 |
180.0 |
180.3 |
| CAW |
CAJ |
CAT |
CAH |
359.5 |
0.4 |
| CAW |
CAJ |
CAT |
CAR |
180.4 |
180.0 |
| CAT |
CAJ |
CAW |
H14 |
180.0 |
180.0 |
| CAT |
CAH |
CAI |
H17 |
179.7 |
180.4 |
| CAI |
CAH |
CAT |
H18 |
180.0 |
179.7 |
| CAJ |
CAT |
CAH |
CAR |
180.9 |
179.6 |
| CAH |
CAT |
CAJ |
H14 |
179.5 |
180.3 |
| CAH |
CAT |
CAR |
CAS |
31.2 |
187.3 |
| CAT |
CAR |
OAB |
CAS |
180.8 |
180.0 |
| OAB |
CAR |
CAS |
CAG |
220.6 |
34.0 |
| CAI |
CAH |
CAT |
CAJ |
0.3 |
359.5 |
| CAW |
CAJ |
CAT |
H14 |
180.0 |
180.0 |
| CAH |
CAT |
CAJ |
CAR |
179.1 |
180.4 |
| CAJ |
CAT |
CAH |
H18 |
180.3 |
179.9 |
| CAJ |
CAT |
CAR |
CAS |
210.4 |
7.7 |
| CAJ |
CAT |
CAR |
CAH |
179.1 |
180.4 |
| CAR |
CAT |
CAH |
H18 |
359.4 |
0.2 |
| OAB |
CAR |
CAT |
CAS |
179.2 |
180.0 |
| CAR |
CAT |
CAJ |
H14 |
0.4 |
360.0 |
| CAT |
CAR |
CAS |
CAG |
39.9 |
214.0 |
| CAF |
CAS |
CAR |
CAG |
179.4 |
180.3 |
| CAR |
CAS |
CAG |
CAE |
179.8 |
179.7 |
| CAR |
CAS |
CAG |
H23 |
359.8 |
0.0 |
| CAR |
CAS |
CAF |
CAG |
180.6 |
179.7 |
| CAF |
CAS |
CAG |
CAE |
0.4 |
359.5 |
| CAF |
CAS |
CAG |
H23 |
180.4 |
179.8 |
| CAD |
CAF |
CAS |
CAG |
359.2 |
0.3 |
| CAF |
CAD |
CAC |
CAE |
358.9 |
0.0 |
| CAC |
CAD |
CAF |
H20 |
180.0 |
180.0 |
| CAF |
CAD |
CAC |
H21 |
178.9 |
179.9 |
| CAS |
CAG |
CAE |
H22 |
179.8 |
180.3 |
| CAC |
CAD |
CAF |
H19 |
181.2 |
180.0 |
| CAF |
CAD |
CAC |
H20 |
180.0 |
180.0 |
| CAE |
CAC |
CAD |
H21 |
180.0 |
180.1 |
| CAD |
CAC |
CAE |
H22 |
180.6 |
180.0 |
| CAS |
CAG |
CAE |
H23 |
180.0 |
180.3 |
| CAG |
CAE |
CAC |
H21 |
180.6 |
179.8 |
| CAC |
CAE |
CAG |
H22 |
180.0 |
180.3 |
| CAS |
CAG |
CAE |
CAC |
359.8 |
0.6 |
| CAE |
CAC |
CAD |
H20 |
178.9 |
180.0 |
| CAD |
CAC |
CAE |
H21 |
180.0 |
179.9 |
| CAG |
CAE |
CAC |
H22 |
180.0 |
179.7 |
| CAK |
CAM |
H1 |
CAX |
239.5 |
240.2 |
| CAK |
CAM |
H1 |
H2 |
119.7 |
120.1 |
| H1 |
CAM |
CAX |
CAN |
189.0 |
182.4 |
| H1 |
CAM |
CAX |
CAO |
69.7 |
62.5 |
| CAX |
CAM |
H1 |
H2 |
240.3 |
239.9 |
| H1 |
CAM |
CAX |
H11 |
310.0 |
302.3 |
| CAK |
CAM |
H2 |
CAX |
120.5 |
119.8 |
| CAK |
CAM |
H2 |
H1 |
240.2 |
239.9 |
| H2 |
CAM |
CAX |
CAN |
69.3 |
62.3 |
| H2 |
CAM |
CAX |
CAO |
309.9 |
302.4 |
| CAX |
CAM |
H2 |
H1 |
119.7 |
120.1 |
| H2 |
CAM |
CAX |
H11 |
190.2 |
182.2 |
| H3 |
CAK |
NAQ |
CAL |
52.1 |
178.2 |
| NAQ |
CAK |
H3 |
H4 |
120.4 |
240.1 |
| H3 |
CAK |
NAQ |
H5 |
172.2 |
302.4 |
| H3 |
CAK |
CAM |
CAX |
299.1 |
179.2 |
| H3 |
CAK |
CAM |
H1 |
59.2 |
299.2 |
| H3 |
CAK |
CAM |
H2 |
179.0 |
59.3 |
| H4 |
CAK |
NAQ |
CAL |
172.4 |
58.3 |
| NAQ |
CAK |
H4 |
H3 |
239.6 |
120.0 |
| H4 |
CAK |
NAQ |
H5 |
292.4 |
182.5 |
| H4 |
CAK |
CAM |
CAX |
178.8 |
299.1 |
| H4 |
CAK |
CAM |
H1 |
298.9 |
59.1 |
| H4 |
CAK |
CAM |
H2 |
58.7 |
179.2 |
| CAK |
NAQ |
H5 |
CAL |
239.7 |
235.7 |
| H5 |
NAQ |
CAK |
H3 |
172.2 |
302.4 |
| H5 |
NAQ |
CAK |
H4 |
292.4 |
182.5 |
| H5 |
NAQ |
CAL |
CAN |
305.9 |
297.6 |
| H5 |
NAQ |
CAL |
H7 |
65.7 |
57.6 |
| H5 |
NAQ |
CAL |
H8 |
186.1 |
177.6 |
| NAQ |
CAL |
H7 |
CAN |
241.2 |
240.0 |
| H7 |
CAL |
NAQ |
H5 |
65.7 |
57.6 |
| NAQ |
CAL |
H7 |
H8 |
120.6 |
120.0 |
| CAN |
CAL |
H7 |
H8 |
239.4 |
240.0 |
| H7 |
CAL |
CAN |
H9 |
303.9 |
300.8 |
| H7 |
CAL |
CAN |
H10 |
63.3 |
60.8 |
| NAQ |
CAL |
H8 |
CAN |
118.8 |
120.0 |
| H8 |
CAL |
NAQ |
H5 |
186.1 |
177.6 |
| NAQ |
CAL |
H8 |
H7 |
239.4 |
240.0 |
| CAN |
CAL |
H8 |
H7 |
120.6 |
120.0 |
| H8 |
CAL |
CAN |
H9 |
183.5 |
180.8 |
| H8 |
CAL |
CAN |
H10 |
302.9 |
300.8 |
| H9 |
CAN |
CAL |
H7 |
303.9 |
300.8 |
| H9 |
CAN |
CAL |
H8 |
183.5 |
180.8 |
| CAL |
CAN |
H9 |
H10 |
119.2 |
120.0 |
| CAX |
CAN |
H9 |
H10 |
240.9 |
239.9 |
| H10 |
CAN |
CAL |
H7 |
63.3 |
60.8 |
| H10 |
CAN |
CAL |
H8 |
302.9 |
300.8 |
| CAL |
CAN |
H10 |
H9 |
240.9 |
239.9 |
| CAX |
CAN |
H10 |
H9 |
119.2 |
120.1 |
| CAM |
CAX |
H11 |
CAN |
237.8 |
240.3 |
| CAM |
CAX |
H11 |
CAO |
119.2 |
120.1 |
| H11 |
CAX |
CAM |
H1 |
310.0 |
302.3 |
| H11 |
CAX |
CAM |
H2 |
190.2 |
182.2 |
| H11 |
CAX |
CAN |
H9 |
168.8 |
177.8 |
| H11 |
CAX |
CAN |
H10 |
49.4 |
57.7 |
| H11 |
CAX |
CAO |
H12 |
168.9 |
65.2 |
| H11 |
CAX |
CAO |
H13 |
287.8 |
185.2 |
| H12 |
CAO |
CAX |
H11 |
168.9 |
65.2 |
| CAX |
CAO |
H12 |
H13 |
118.3 |
120.0 |
| NAY |
CAO |
H12 |
H13 |
241.7 |
240.1 |
| H13 |
CAO |
CAX |
H11 |
287.8 |
185.2 |
| CAX |
CAO |
H13 |
H12 |
241.7 |
240.0 |
| NAY |
CAO |
H13 |
H12 |
118.3 |
119.9 |
| CAW |
CAJ |
H14 |
CAT |
180.0 |
180.0 |
| H14 |
CAJ |
CAT |
CAH |
179.5 |
180.3 |
| H14 |
CAJ |
CAT |
CAR |
0.4 |
360.0 |
| CAV |
CAI |
H17 |
CAH |
180.0 |
180.1 |
| H17 |
CAI |
CAH |
CAT |
179.7 |
180.4 |
| H17 |
CAI |
CAH |
H18 |
359.7 |
0.1 |
| CAI |
CAH |
H18 |
CAT |
180.0 |
180.3 |
| H18 |
CAH |
CAI |
H17 |
359.7 |
0.1 |
| H18 |
CAH |
CAT |
CAR |
359.4 |
0.2 |
| H19 |
CAF |
CAS |
CAG |
179.1 |
180.3 |
| H19 |
CAF |
CAD |
CAC |
181.2 |
180.0 |
| H19 |
CAF |
CAD |
H20 |
1.2 |
0.0 |
| CAF |
CAD |
H20 |
CAC |
180.0 |
180.0 |
| H20 |
CAD |
CAF |
H19 |
1.2 |
0.0 |
| H20 |
CAD |
CAC |
CAE |
178.9 |
180.0 |
| H20 |
CAD |
CAC |
H21 |
358.9 |
359.9 |
| CAD |
CAC |
H21 |
CAE |
180.0 |
180.1 |
| H21 |
CAC |
CAD |
H20 |
358.9 |
359.9 |
| H21 |
CAC |
CAE |
H22 |
0.6 |
0.0 |
| H22 |
CAE |
CAC |
H21 |
0.6 |
0.0 |
| CAS |
CAG |
H23 |
CAE |
180.0 |
179.7 |
| H23 |
CAG |
CAE |
H22 |
359.7 |
360.0 |