PDB Chemical Component B5A

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for B5A

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAE	NAL	1.474	1.468
CAE	CAG	1.529	1.530
NAL	CAD	1.471	1.469
CAD	CAF	1.528	1.530
CAG	CAP	1.537	1.531
CAP	CAF	1.537	1.532
CAP	CAH	1.536	1.530
CAH	NAQ	1.474	1.465
NAQ	NAK	1.239	1.400
NAQ	C4	1.327	1.364
NAK	CAC	1.340	1.303
C4	N3	1.342	1.332
C4	C5	1.385	1.409
N3	C2	1.327	1.315
CAC	C5	1.331	1.412
C5	C6	1.389	1.407
C2	N1	1.331	1.321
C6	N1	1.347	1.328
C6	NAA	1.332	1.381
CAF	H1	1.100	1.090
CAF	H2	1.101	1.090
CAD	H3	1.100	1.091
CAD	H4	1.100	1.090
NAL	H5	1.000	1.008
CAE	H7	1.100	1.090
CAE	H8	1.100	1.091
CAG	H9	1.100	1.091
CAG	H10	1.100	1.090
CAP	H11	1.100	1.090
CAH	H12	1.100	1.090
CAH	H13	1.100	1.090
CAC	H14	1.080	1.080
C2	H15	1.080	1.079
NAA	H16	1.000	0.970
NAA	H17	1.000	0.970

Bond Angles for B5A

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAE	NAL	H5	109.4	111.0
CAE	CAG	CAP	111.4	109.3
CAG	CAE	H7	109.4	109.5
CAG	CAE	H8	109.5	109.5
CAE	CAG	H9	109.0	109.5
CAE	CAG	H10	109.0	109.5
NAL	CAD	H3	109.6	109.4
NAL	CAD	H4	109.6	109.4
CAD	CAF	H1	109.0	109.5
CAD	CAF	H2	109.0	109.5
CAG	CAP	CAH	110.3	109.5
CAP	CAG	H9	109.0	109.5
CAP	CAG	H10	109.0	109.5
CAG	CAP	H11	109.2	109.4
CAP	CAF	H1	108.9	109.4
CAP	CAF	H2	108.9	109.5
CAP	CAH	NAQ	113.3	109.4
CAH	CAP	H11	109.2	109.6
CAP	CAH	H12	108.5	109.5
CAP	CAH	H13	108.5	109.5
CAH	NAQ	NAK	124.7	125.9
CAH	NAQ	C4	124.1	125.9
NAQ	CAH	H12	108.5	109.5
NAQ	CAH	H13	108.5	109.5
NAK	NAQ	C4	111.2	108.2
NAQ	NAK	CAC	109.8	109.7
NAQ	C4	N3	134.4	134.6
NAQ	C4	C5	105.5	106.6
NAK	CAC	C5	107.3	108.5
NAK	CAC	H14	126.4	125.8
C4	N3	C2	119.8	120.6
C4	C5	C6	118.7	118.3
N3	C2	N1	121.8	122.6
N3	C2	H15	119.1	118.6
CAC	C5	C6	135.1	134.7
C5	CAC	H14	126.3	125.7
C5	C6	N1	118.5	118.4
C5	C6	NAA	120.9	120.8
N1	C2	H15	119.1	118.7
C6	NAA	H16	109.5	120.0
C6	NAA	H17	109.5	120.0
H1	CAF	H2	109.5	109.5
H3	CAD	H4	109.5	109.5
H7	CAE	H8	109.5	109.4
H9	CAG	H10	109.5	109.5
H12	CAH	H13	109.5	109.6
H16	NAA	H17	109.5	120.0

Torsion Angles for B5A

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CAE	NAL	CAD	H3	55.2	178.3
CAE	NAL	CAD	H4	175.4	58.3
CAG	CAE	NAL	H5	184.4	185.8
CAE	CAG	CAP	CAH	170.7	177.5
CAP	CAG	CAE	H9	239.7	240.1
CAP	CAG	CAE	H10	120.3	120.0
CAE	CAG	CAP	H11	290.7	297.7
H7	CAE	CAG	H8	119.9	120.0
H9	CAG	CAE	H10	240.6	239.9
NAL	CAD	CAF	H1	178.6	179.1
NAL	CAD	CAF	H2	298.0	299.2
H3	CAD	NAL	H4	239.8	120.0
CAP	CAF	CAD	H1	239.7	240.1
CAP	CAF	CAD	H2	120.3	120.0
H1	CAF	CAD	H2	240.6	239.8
CAP	CAG	CAE	H7	182.7	180.8
CAP	CAG	CAE	H8	62.8	60.9
CAE	CAG	CAP	H9	120.3	119.9
CAE	CAG	CAP	H10	239.7	240.0
CAG	CAP	CAF	H1	188.4	182.5
CAG	CAP	CAF	H2	69.0	62.4
CAG	CAP	CAH	NAQ	59.5	175.0
CAH	CAP	CAG	H11	240.0	239.8
CAG	CAP	CAH	H12	180.1	294.9
CAG	CAP	CAH	H13	298.9	55.0
H9	CAG	CAP	H10	119.4	120.1
CAD	CAF	CAP	H1	120.3	120.0
CAD	CAF	CAP	H2	239.7	240.0
H1	CAF	CAP	H2	119.4	120.0
CAH	CAP	CAG	H9	50.4	57.6
CAH	CAP	CAG	H10	291.0	297.5
CAG	CAP	CAH	H11	120.0	120.1
CAH	CAP	CAF	H1	67.4	62.5
CAH	CAP	CAF	H2	308.0	302.5
CAP	CAH	NAQ	NAK	258.6	90.1
CAP	CAH	NAQ	C4	79.5	269.7
NAQ	CAH	CAP	H12	239.4	240.1
NAQ	CAH	CAP	H13	120.6	120.0
H12	CAH	CAP	H13	241.1	239.9
NAQ	CAH	CAP	H11	299.5	54.9
CAP	CAH	NAQ	H12	120.6	119.9
CAP	CAH	NAQ	H13	239.4	240.0
NAK	NAQ	CAH	C4	179.1	180.4
CAH	NAQ	NAK	CAC	180.3	179.9
CAH	NAQ	C4	N3	359.2	0.1
CAH	NAQ	C4	C5	179.6	179.9
H12	CAH	NAQ	H13	118.9	120.1
CAH	NAQ	NAK	C4	180.8	179.6
NAK	NAQ	CAH	H12	138.0	330.1
NAK	NAQ	CAH	H13	19.2	210.0
NAK	NAQ	C4	N3	180.0	179.8
NAK	NAQ	C4	C5	0.4	359.6
NAQ	NAK	CAC	C5	0.4	360.0
NAQ	NAK	CAC	H14	180.4	179.9
CAH	NAQ	C4	NAK	179.2	180.4
C4	NAQ	CAH	H12	318.9	149.7
C4	NAQ	CAH	H13	200.1	29.6
C4	NAQ	NAK	CAC	359.5	0.3
NAQ	C4	N3	C2	180.4	180.0
NAQ	C4	C5	C6	179.6	180.2
CAC	NAK	NAQ	C4	359.5	0.3
NAK	CAC	C5	C6	180.2	180.0
C5	CAC	NAK	H14	180.0	180.0
NAQ	C4	N3	C5	180.5	179.7
N3	C4	C5	C6	359.9	0.0
C4	N3	C2	N1	0.1	360.0
C4	N3	C2	H15	180.1	179.9
NAQ	C4	C5	N3	179.7	180.2
CAC	C5	C4	C6	180.2	180.2
C4	C5	CAC	H14	179.9	179.8
C4	C5	C6	N1	0.2	359.6
C4	C5	C6	NAA	180.0	180.3
N1	C2	N3	H15	180.0	180.0
NAQ	C4	C5	CAC	359.8	0.4
NAK	CAC	C5	H14	180.0	180.0
C4	C5	CAC	C6	179.7	179.7
CAC	C5	C6	N1	179.8	179.3
CAC	C5	C6	NAA	359.7	360.0
C6	C5	CAC	H14	0.2	0.1
C5	C6	NAA	H16	180.2	360.0
C5	C6	NAA	H17	300.2	180.0
N3	C2	N1	H15	180.0	180.0
C5	C6	N1	C2	359.8	0.6
C5	C6	N1	NAA	179.8	180.7
C6	N1	C2	H15	180.0	179.6
C5	C6	NAA	N1	180.2	179.3
H16	NAA	C6	H17	240.0	179.9
CAD	CAF	H1	H2	119.1	120.2
CAP	CAF	H1	H2	241.0	240.0
CAD	CAF	H2	H1	240.9	239.8
CAP	CAF	H2	H1	119.0	120.0
NAL	CAD	H3	H4	120.2	240.1
H3	CAD	CAF	H1	58.7	299.0
H3	CAD	CAF	H2	178.1	59.2
NAL	CAD	H4	H3	239.8	119.9
H4	CAD	CAF	H1	298.5	59.1
H4	CAD	CAF	H2	57.9	179.2
H5	NAL	CAD	H3	295.2	54.2
H5	NAL	CAD	H4	55.4	294.2
H7	CAE	NAL	H5	304.3	305.9
H7	CAE	CAG	CAP	182.7	180.8
CAG	CAE	H7	H8	240.0	240.0
H7	CAE	CAG	H9	303.0	300.7
H7	CAE	CAG	H10	62.5	60.8
H8	CAE	NAL	H5	64.3	65.8
H8	CAE	CAG	CAP	62.8	60.9
CAG	CAE	H8	H7	119.9	120.0
H8	CAE	CAG	H9	183.1	180.8
H8	CAE	CAG	H10	302.5	300.9
CAE	CAG	H9	CAP	238.2	240.2
H9	CAG	CAE	H7	303.0	300.7
H9	CAG	CAE	H8	183.1	180.8
CAE	CAG	H9	H10	119.1	120.1
H9	CAG	CAP	CAH	50.4	57.6
CAP	CAG	H9	H10	240.9	239.9
H9	CAG	CAP	H11	170.4	177.8
CAE	CAG	H10	CAP	121.8	119.9
H10	CAG	CAE	H7	62.5	60.8
H10	CAG	CAE	H8	302.5	300.9
CAE	CAG	H10	H9	240.9	239.9
H10	CAG	CAP	CAH	291.0	297.5
CAP	CAG	H10	H9	119.1	120.0
H10	CAG	CAP	H11	51.0	57.7
CAG	CAP	H11	CAH	239.3	239.9
H11	CAP	CAG	H9	170.4	177.8
H11	CAP	CAG	H10	51.0	57.7
H11	CAP	CAF	H1	308.3	302.2
H11	CAP	CAF	H2	188.9	182.2
H11	CAP	CAH	NAQ	299.5	54.9
H11	CAP	CAH	H12	60.0	174.8
H11	CAP	CAH	H13	178.9	294.9
CAP	CAH	H12	NAQ	236.5	240.1
H12	CAH	CAP	H11	60.0	174.8
CAP	CAH	H12	H13	118.3	120.0
H12	CAH	NAQ	NAK	138.0	330.1
H12	CAH	NAQ	C4	318.9	149.7
NAQ	CAH	H12	H13	241.8	239.9
CAP	CAH	H13	NAQ	123.5	119.9
H13	CAH	CAP	H11	178.9	294.9
CAP	CAH	H13	H12	241.7	240.0
H13	CAH	NAQ	NAK	19.2	210.0
H13	CAH	NAQ	C4	200.1	29.6
NAQ	CAH	H13	H12	118.3	120.0
NAK	CAC	H14	C5	180.0	180.1
H14	CAC	C5	C6	0.2	0.1
N3	C2	H15	N1	180.0	180.0
C6	NAA	H16	H17	120.0	180.1
C6	NAA	H17	H16	239.9	179.9