PDB Chemical Component B2X

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for B2X

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O2	1.478	1.431
C1	C10	1.444	1.508
O2	C3	1.444	1.430
C3	C4	1.445	1.507
C4	C5	1.404	1.359
C4	C9	1.413	1.406
C5	C6	1.410	1.394
C6	C7	1.397	1.363
C7	C8	1.405	1.401
C8	C9	1.418	1.413
C8	C14	1.425	1.417
C9	C10	1.409	1.408
C10	C11	1.390	1.359
C11	C12	1.390	1.393
C12	CL13	1.750	1.736
C12	C14	1.403	1.386
C14	C15	1.433	1.479
C15	N16	1.345	1.331
C15	N17	1.350	1.331
N16	C23	1.348	1.330
N17	C18	1.349	1.329
C18	N19	1.323	1.380
C18	N22	1.339	1.330
N22	C23	1.311	1.330
C23	S24	1.729	1.762
S24	C25	1.790	1.811
C1	H1	1.100	1.090
C1	H1A	1.100	1.090
C3	H3	1.100	1.091
C3	H3A	1.100	1.089
C5	H5	1.080	1.080
C6	H6	1.080	1.080
C7	H7	1.080	1.080
C11	H11	1.080	1.080
N19	HN19	1.000	0.970
N19	HN1A	1.000	0.971
C25	H25	1.100	1.091
C25	H25A	1.100	1.090
C25	H25B	1.100	1.090

Bond Angles for B2X

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	C10	111.9	109.2
C1	O2	C3	105.5	114.4
O2	C1	H1	108.7	109.5
O2	C1	H1A	108.6	109.5
C1	C10	C9	119.8	119.1
C1	C10	C11	120.4	121.0
C10	C1	H1	108.7	109.5
C10	C1	H1A	108.7	109.5
O2	C3	C4	114.6	109.3
O2	C3	H3	107.8	109.5
O2	C3	H3A	107.8	109.6
C3	C4	C5	123.0	121.2
C3	C4	C9	117.4	119.3
C4	C3	H3	107.8	109.5
C4	C3	H3A	107.8	109.6
C5	C4	C9	119.3	119.6
C4	C5	C6	120.2	120.7
C4	C5	H5	119.9	119.7
C4	C9	C8	120.8	119.7
C4	C9	C10	118.7	120.3
C5	C6	C7	120.0	121.1
C6	C5	H5	119.9	119.6
C5	C6	H6	120.0	119.4
C6	C7	C8	121.1	119.6
C7	C6	H6	120.0	119.4
C6	C7	H7	119.5	120.1
C7	C8	C9	118.6	119.2
C7	C8	C14	122.4	121.8
C8	C7	H7	119.5	120.2
C9	C8	C14	119.0	119.0
C8	C9	C10	120.5	120.0
C8	C14	C12	118.9	119.2
C8	C14	C15	121.6	120.4
C9	C10	C11	119.8	119.9
C10	C11	C12	120.2	121.0
C10	C11	H11	119.9	119.5
C11	C12	CL13	115.8	119.6
C11	C12	C14	121.5	120.9
C12	C11	H11	119.9	119.5
CL13	C12	C14	122.6	119.5
C12	C14	C15	119.4	120.4
C14	C15	N16	120.4	120.0
C14	C15	N17	121.0	120.1
N16	C15	N17	118.5	120.0
C15	N16	C23	118.3	120.0
C15	N17	C18	121.1	120.0
N16	C23	N22	123.8	120.0
N16	C23	S24	119.4	120.0
N17	C18	N19	118.9	120.0
N17	C18	N22	120.2	120.0
N19	C18	N22	120.9	120.0
C18	N19	HN19	109.5	120.0
C18	N19	HN1A	109.4	120.0
C18	N22	C23	117.8	120.1
N22	C23	S24	116.4	120.0
C23	S24	C25	103.5	100.0
S24	C25	H25	109.5	109.5
S24	C25	H25A	109.5	109.4
S24	C25	H25B	109.4	109.5
H1	C1	H1A	110.3	109.5
H3	C3	H3A	111.1	109.5
HN19	N19	HN1A	109.5	120.0
H25	C25	H25A	109.5	109.5
H25	C25	H25B	109.5	109.5
H25A	C25	H25B	109.5	109.5

Torsion Angles for B2X

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	C10	C9	29.8	27.8
O2	C1	C10	C11	212.7	207.8
C10	C1	O2	H1	240.0	240.1
C10	C1	O2	H1A	120.0	119.9
C1	O2	C3	C4	60.5	58.7
C1	O2	C3	H3	180.5	178.6
C1	O2	C3	H3A	300.5	298.7
H1	C1	O2	H1A	240.0	239.9
C10	C1	O2	C3	300.7	301.2
O2	C1	C10	H1	120.0	119.9
O2	C1	C10	H1A	240.0	240.0
C4	C9	C10	C1	2.8	359.8
C8	C9	C10	C1	182.1	179.9
C9	C10	C1	C11	177.2	180.0
C1	C10	C11	C12	178.8	180.0
C1	C10	C11	H11	358.8	0.1
H1	C1	C10	H1A	120.0	120.1
C3	O2	C1	C10	300.7	301.2
C3	O2	C1	H1	60.7	61.1
C3	O2	C1	H1A	180.7	181.3
O2	C3	C4	C5	144.4	152.5
O2	C3	C4	C9	329.8	332.4
C4	C3	O2	H3	240.0	240.1
C4	C3	O2	H3A	120.0	120.0
H3	C3	O2	H3A	240.0	239.9
O2	C3	C4	H3	120.0	119.9
O2	C3	C4	H3A	240.0	240.0
C5	C4	C3	C9	174.7	180.0
C3	C4	C5	C6	184.2	179.9
C3	C4	C5	H5	4.2	359.9
C3	C4	C9	C8	177.4	180.0
C3	C4	C9	C10	356.7	0.1
H3	C3	C4	H3A	120.0	120.1
C3	C4	C5	C9	185.4	180.0
C5	C4	C3	H3	24.4	32.6
C5	C4	C3	H3A	264.4	272.5
C5	C4	C9	C8	2.5	360.0
C5	C4	C9	C10	181.8	180.0
C4	C5	C6	C7	360.0	0.1
C6	C5	C4	H5	180.0	180.1
C4	C5	C6	H6	180.0	180.0
C1	C10	C9	C4	2.8	359.8
C3	C4	C9	C5	174.9	180.0
C9	C4	C3	H3	209.7	212.5
C9	C4	C3	H3A	89.8	92.4
C9	C4	C5	C6	358.8	360.0
C9	C4	C5	H5	178.8	179.9
C7	C8	C9	C4	357.4	0.1
C4	C9	C8	C14	179.9	180.2
C8	C9	C4	C10	180.7	180.0
C4	C9	C10	C11	180.0	179.8
C6	C5	C4	C9	358.8	360.0
C4	C5	C6	H5	180.0	179.9
C5	C6	C7	C8	360.0	360.0
C7	C6	C5	H6	180.0	180.0
C5	C6	C7	H7	180.0	180.1
C7	C6	C5	H5	180.0	180.1
C5	C6	C7	H6	180.0	180.0
C6	C7	C8	C9	1.3	360.0
C6	C7	C8	C14	178.8	179.9
C8	C7	C6	H7	180.0	179.9
C4	C9	C8	C7	357.4	0.1
C8	C7	C6	H6	180.0	180.0
C6	C7	C8	H7	180.0	180.1
C9	C8	C7	C14	182.5	180.1
C7	C8	C9	C10	178.1	180.0
C7	C8	C14	C12	181.2	180.1
C7	C8	C14	C15	3.6	0.1
C1	C10	C9	C8	182.1	179.9
C4	C9	C8	C10	179.3	180.0
C7	C8	C9	C14	177.6	179.9
C9	C8	C7	H7	181.3	179.9
C9	C8	C14	C12	358.7	360.0
C9	C8	C14	C15	181.1	180.0
C8	C9	C10	C11	359.3	359.9
C7	C8	C14	C9	182.5	180.1
C14	C8	C7	H7	358.8	359.8
C14	C8	C9	C10	0.6	0.1
C11	C12	C14	C8	2.3	359.9
CL13	C12	C14	C8	184.4	180.0
C12	C14	C8	C15	177.6	180.0
C8	C14	C15	N16	57.3	131.2
C8	C14	C15	N17	235.3	310.9
C1	C10	C9	C11	182.8	180.0
C9	C10	C1	H1	269.8	267.8
C9	C10	C1	H1A	149.8	147.7
C4	C9	C10	C8	180.7	180.0
C10	C9	C8	C14	0.6	0.1
C9	C10	C11	C12	1.6	0.0
C9	C10	C11	H11	181.7	180.1
C1	C10	C11	C9	177.2	180.0
C11	C10	C1	H1	92.7	87.8
C11	C10	C1	H1A	332.6	327.7
C10	C11	C12	CL13	175.6	180.0
C10	C11	C12	C14	357.5	0.1
C12	C11	C10	H11	180.0	179.9
C8	C14	C12	C11	2.3	359.9
C10	C11	C12	H11	180.0	180.1
CL13	C12	C11	C14	178.0	180.0
C11	C12	C14	C15	179.9	179.9
C8	C14	C12	CL13	184.4	180.0
C11	C12	CL13	C14	182.0	180.0
CL13	C12	C11	H11	355.6	360.0
CL13	C12	C14	C15	2.0	360.0
C8	C14	C12	C15	182.4	180.0
C11	C12	C14	CL13	177.9	180.0
C14	C12	C11	H11	177.5	180.0
C12	C14	C15	N16	239.7	311.2
C12	C14	C15	N17	57.8	130.9
C8	C14	C15	C12	177.6	180.0
N16	C15	C14	N17	182.0	180.3
C14	C15	N16	C23	179.5	180.0
C14	C15	N17	C18	182.9	180.0
C14	C15	N16	N17	178.1	179.7
N16	C15	N17	C18	0.9	359.8
C15	N16	C23	N22	354.7	0.1
C15	N16	C23	S24	181.9	180.0
C14	C15	N17	N16	181.9	180.3
N17	C15	N16	C23	1.4	0.2
C15	N17	C18	N19	178.6	180.0
C15	N17	C18	N22	0.2	360.0
C23	N16	C15	N17	1.4	0.2
C18	N22	C23	N16	6.4	359.7
N22	C23	N16	S24	172.9	180.1
N16	C23	S24	C25	340.5	180.0
N19	C18	N17	N22	178.4	180.0
N17	C18	N19	HN19	0.0	0.0
N17	C18	N19	HN1A	120.0	180.0
N17	C18	N22	C23	356.3	0.3
N17	C18	N19	N22	181.6	180.0
N19	C18	N22	C23	177.9	180.3
HN19	N19	C18	HN1A	240.0	180.0
N16	C23	N22	C18	6.4	359.7
N17	C18	N22	N19	178.3	180.0
N22	C18	N19	HN19	178.4	180.0
N22	C18	N19	HN1A	298.4	360.0
C18	N22	C23	S24	179.4	179.8
N16	C23	N22	S24	186.9	179.9
N22	C23	S24	C25	167.1	359.9
N16	C23	S24	N22	173.4	180.1
C23	S24	C25	H25	180.0	300.1
C23	S24	C25	H25A	300.0	60.0
C23	S24	C25	H25B	60.0	180.0
H25	C25	S24	H25A	240.0	240.0
H25	C25	S24	H25B	120.0	120.0
H25A	C25	S24	H25B	240.0	240.0
O2	C1	H1	C10	238.0	240.2
H1	C1	O2	C3	60.7	61.1
O2	C1	H1	H1A	119.0	120.2
H1	C1	C10	C9	269.8	267.8
H1	C1	C10	C11	92.7	87.8
C10	C1	H1	H1A	241.0	239.9
O2	C1	H1A	C10	122.0	119.8
H1A	C1	O2	C3	180.7	181.3
O2	C1	H1A	H1	241.0	239.9
H1A	C1	C10	C9	149.8	147.7
H1A	C1	C10	C11	332.6	327.7
C10	C1	H1A	H1	119.0	120.1
O2	C3	H3	C4	235.8	240.2
O2	C3	H3	H3A	117.9	120.1
H3	C3	C4	C5	24.4	32.6
H3	C3	C4	C9	209.7	212.5
C4	C3	H3	H3A	242.2	239.9
O2	C3	H3A	C4	124.2	119.8
O2	C3	H3A	H3	242.1	239.9
H3A	C3	C4	C5	264.4	272.5
H3A	C3	C4	C9	89.8	92.4
C4	C3	H3A	H3	117.9	120.1
H5	C5	C4	C9	178.8	179.9
C4	C5	H5	C6	180.0	180.1
H5	C5	C6	C7	180.0	180.1
H5	C5	C6	H6	360.0	0.1
C5	C6	H6	C7	180.0	180.0
H6	C6	C5	H5	360.0	0.1
H6	C6	C7	C8	180.0	180.0
H6	C6	C7	H7	360.0	0.1
C6	C7	H7	C8	180.0	179.9
H7	C7	C6	H6	360.0	0.1
H7	C7	C8	C9	181.3	179.9
H7	C7	C8	C14	358.8	359.8
C10	C11	H11	C12	180.0	179.9
H11	C11	C12	CL13	355.6	360.0
H11	C11	C12	C14	177.5	180.0
HN19	N19	C18	N22	178.4	180.0
C18	N19	HN19	HN1A	120.0	180.0
HN1A	N19	C18	N22	298.4	360.0
C18	N19	HN1A	HN19	240.0	180.0
S24	C25	H25	H25A	120.0	120.0
S24	C25	H25	H25B	240.0	240.0
H25A	C25	H25	H25B	120.0	120.0
S24	C25	H25A	H25	240.0	240.0
S24	C25	H25A	H25B	120.0	120.0
H25	C25	H25A	H25B	240.0	240.0
S24	C25	H25B	H25	120.0	120.0
S24	C25	H25B	H25A	240.0	240.0
H25	C25	H25B	H25A	120.0	120.0