PDB Chemical Component B2L

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for B2L

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O2	1.461	1.430
C1	C10	1.415	1.508
O2	C3	1.471	1.431
C3	C4	1.409	1.506
C4	C5	1.400	1.359
C4	C9	1.415	1.407
C5	C6	1.399	1.394
C6	C7	1.400	1.362
C7	C8	1.414	1.402
C8	C9	1.418	1.413
C8	C13	1.420	1.416
C9	C10	1.414	1.407
C10	C11	1.404	1.359
C11	C12	1.400	1.391
C12	C13	1.408	1.385
C13	C14	1.404	1.481
C14	N15	1.355	1.331
C14	C16	1.408	1.399
N15	C20	1.349	1.323
C16	C17	1.398	1.382
C17	C18	1.543	1.507
C17	N19	1.353	1.324
N19	C20	1.347	1.325
C20	N21	1.331	1.385
C1	H1	1.100	1.089
C1	H1A	1.100	1.090
C3	H3	1.100	1.090
C3	H3A	1.100	1.091
C5	H5	1.080	1.080
C6	H6	1.080	1.081
C7	H7	1.080	1.080
C11	H11	1.080	1.080
C12	H12	1.080	1.080
C16	H16	1.080	1.080
C18	H18	1.100	1.090
C18	H18A	1.100	1.090
C18	H18B	1.100	1.090
N21	HN21	0.999	0.970
N21	HN2A	1.000	0.970

Bond Angles for B2L

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	C10	117.6	109.2
C1	O2	C3	109.2	114.4
O2	C1	H1	106.9	109.5
O2	C1	H1A	106.8	109.5
C1	C10	C9	118.9	119.2
C1	C10	C11	120.8	121.0
C10	C1	H1	106.9	109.5
C10	C1	H1A	106.9	109.5
O2	C3	C4	117.1	109.3
O2	C3	H3	107.0	109.5
O2	C3	H3A	107.0	109.5
C3	C4	C5	120.3	121.2
C3	C4	C9	119.2	119.3
C4	C3	H3	107.0	109.6
C4	C3	H3A	107.0	109.5
C5	C4	C9	120.5	119.5
C4	C5	C6	119.7	120.7
C4	C5	H5	120.1	119.6
C4	C9	C8	120.1	119.7
C4	C9	C10	119.6	120.2
C5	C6	C7	120.2	121.2
C6	C5	H5	120.2	119.7
C5	C6	H6	119.9	119.4
C6	C7	C8	121.3	119.6
C7	C6	H6	119.9	119.4
C6	C7	H7	119.4	120.2
C7	C8	C9	118.2	119.2
C7	C8	C13	122.4	121.8
C8	C7	H7	119.4	120.2
C9	C8	C13	119.4	119.0
C8	C9	C10	120.2	120.0
C8	C13	C12	119.2	119.2
C8	C13	C14	124.1	120.4
C9	C10	C11	120.2	119.9
C10	C11	C12	119.3	121.0
C10	C11	H11	120.4	119.5
C11	C12	C13	121.6	120.9
C12	C11	H11	120.3	119.5
C11	C12	H12	119.2	119.6
C12	C13	C14	116.6	120.4
C13	C12	H12	119.2	119.5
C13	C14	N15	119.4	120.5
C13	C14	C16	121.6	120.5
N15	C14	C16	118.5	119.0
C14	N15	C20	121.7	120.6
C14	C16	C17	118.6	118.4
C14	C16	H16	120.7	120.8
N15	C20	N19	120.4	121.7
N15	C20	N21	120.0	119.2
C16	C17	C18	120.5	120.4
C16	C17	N19	119.7	119.3
C17	C16	H16	120.7	120.8
C18	C17	N19	119.8	120.3
C17	C18	H18	109.5	109.5
C17	C18	H18A	109.5	109.5
C17	C18	H18B	109.5	109.4
C17	N19	C20	120.9	121.0
N19	C20	N21	119.6	119.1
C20	N21	HN21	109.5	120.0
C20	N21	HN2A	109.5	120.0
H1	C1	H1A	111.9	109.6
H3	C3	H3A	111.8	109.5
H18	C18	H18A	109.5	109.5
H18	C18	H18B	109.4	109.5
H18A	C18	H18B	109.5	109.5
HN21	N21	HN2A	109.4	120.0

Torsion Angles for B2L

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	C10	C9	22.8	27.7
O2	C1	C10	C11	207.2	207.8
C10	C1	O2	H1	240.0	240.1
C10	C1	O2	H1A	120.0	119.9
C1	O2	C3	C4	46.5	58.6
C1	O2	C3	H3	166.5	178.7
C1	O2	C3	H3A	286.6	298.7
H1	C1	O2	H1A	240.0	239.8
C10	C1	O2	C3	313.8	301.2
O2	C1	C10	H1	120.0	119.9
O2	C1	C10	H1A	240.0	240.1
C4	C9	C10	C1	3.4	359.9
C8	C9	C10	C1	182.1	179.9
C9	C10	C1	C11	175.6	180.0
C1	C10	C11	C12	179.3	180.1
C1	C10	C11	H11	359.3	0.0
H1	C1	C10	H1A	120.0	120.1
C3	O2	C1	C10	313.8	301.2
C3	O2	C1	H1	73.8	61.1
C3	O2	C1	H1A	193.8	181.3
O2	C3	C4	C5	154.6	152.5
O2	C3	C4	C9	336.4	332.5
C4	C3	O2	H3	240.0	240.0
C4	C3	O2	H3A	120.0	119.9
H3	C3	O2	H3A	240.0	239.9
O2	C3	C4	H3	120.0	120.0
O2	C3	C4	H3A	240.0	240.1
C5	C4	C3	C9	178.2	180.0
C3	C4	C5	C6	179.7	180.0
C3	C4	C5	H5	359.7	359.9
C3	C4	C9	C8	178.4	180.0
C3	C4	C9	C10	357.1	360.0
H3	C3	C4	H3A	120.0	120.1
C3	C4	C5	C9	181.9	180.0
C5	C4	C3	H3	34.6	32.5
C5	C4	C3	H3A	274.6	272.4
C5	C4	C9	C8	0.2	360.0
C5	C4	C9	C10	178.9	180.0
C4	C5	C6	C7	3.1	0.1
C6	C5	C4	H5	180.0	180.0
C4	C5	C6	H6	183.1	180.0
C1	C10	C9	C4	3.4	359.9
C3	C4	C9	C5	178.2	180.0
C9	C4	C3	H3	216.5	212.5
C9	C4	C3	H3A	96.4	92.4
C9	C4	C5	C6	357.9	359.9
C9	C4	C5	H5	177.9	179.9
C7	C8	C9	C4	0.7	0.1
C4	C9	C8	C13	179.0	180.1
C8	C9	C4	C10	181.3	180.0
C4	C9	C10	C11	179.0	179.8
C6	C5	C4	C9	357.9	359.9
C4	C5	C6	H5	180.0	180.0
C5	C6	C7	C8	357.9	360.0
C7	C6	C5	H6	180.0	180.0
C5	C6	C7	H7	177.9	180.0
C7	C6	C5	H5	183.0	180.1
C5	C6	C7	H6	180.0	180.0
C6	C7	C8	C9	0.2	359.9
C6	C7	C8	C13	182.0	179.9
C8	C7	C6	H7	180.0	180.0
C4	C9	C8	C7	0.7	0.1
C8	C7	C6	H6	177.9	180.0
C6	C7	C8	H7	180.0	180.0
C9	C8	C7	C13	178.2	180.1
C7	C8	C9	C10	182.1	180.1
C7	C8	C13	C12	178.2	180.0
C7	C8	C13	C14	1.0	0.1
C1	C10	C9	C8	182.1	179.9
C4	C9	C8	C10	178.7	180.0
C7	C8	C9	C13	181.7	179.9
C9	C8	C7	H7	180.2	179.9
C9	C8	C13	C12	0.1	360.0
C9	C8	C13	C14	182.8	180.0
C8	C9	C10	C11	357.7	359.8
C7	C8	C13	C9	178.2	180.1
C13	C8	C7	H7	2.0	359.9
C13	C8	C9	C10	0.3	0.1
C11	C12	C13	C8	1.5	0.0
C12	C13	C8	C14	177.3	180.0
C8	C13	C12	H12	181.5	180.1
C8	C13	C14	N15	228.8	48.1
C8	C13	C14	C16	57.2	227.8
C1	C10	C9	C11	184.4	180.0
C9	C10	C1	H1	262.8	267.8
C9	C10	C1	H1A	142.8	147.7
C4	C9	C10	C8	181.3	180.0
C10	C9	C8	C13	0.3	0.1
C9	C10	C11	C12	3.8	0.1
C9	C10	C11	H11	183.8	180.1
C1	C10	C11	C9	175.5	180.0
C11	C10	C1	H1	87.2	87.9
C11	C10	C1	H1A	327.2	327.7
C10	C11	C12	C13	356.5	359.9
C12	C11	C10	H11	180.0	180.1
C10	C11	C12	H12	176.5	179.9
C8	C13	C12	C11	1.5	0.0
C10	C11	C12	H11	180.0	179.9
C11	C12	C13	C14	179.0	180.0
C13	C12	C11	H12	180.0	180.0
C8	C13	C12	C14	182.5	180.0
C13	C12	C11	H11	176.5	180.0
C11	C12	C13	H12	180.0	180.0
C12	C13	C14	N15	51.5	228.1
C12	C13	C14	C16	239.9	47.8
C8	C13	C14	C12	177.3	180.0
C14	C13	C12	H12	359.0	0.0
N15	C14	C13	C16	171.6	180.3
C13	C14	N15	C20	184.3	180.0
C13	C14	C16	C17	176.4	180.0
C13	C14	C16	H16	356.4	0.0
C13	C14	N15	C16	188.1	179.7
N15	C14	C16	C17	4.7	359.8
N15	C14	C16	H16	184.7	179.7
C14	N15	C20	N19	0.2	360.0
C14	N15	C20	N21	182.1	180.0
C13	C14	C16	N15	171.7	180.3
C16	C14	N15	C20	356.2	0.3
C14	C16	C17	C18	176.0	180.0
C14	C16	C17	N19	357.8	360.0
C17	C16	C14	H16	180.0	180.0
C20	N15	C14	C16	356.2	0.3
C17	N19	C20	N15	2.5	359.7
N19	C20	N15	N21	178.2	180.0
N15	C20	N21	HN21	0.0	0.0
N15	C20	N21	HN2A	120.0	180.0
C14	C16	C17	H16	180.0	180.0
C18	C17	C16	N19	178.1	180.0
C16	C17	C18	H18	181.9	90.0
C16	C17	C18	H18A	301.9	210.0
C16	C17	C18	H18B	61.9	330.0
C16	C17	N19	C20	358.6	0.3
C16	C17	C18	N19	181.9	180.0
C18	C17	C16	H16	356.0	0.0
C18	C17	N19	C20	180.4	180.2
H18	C18	C17	H18A	240.0	240.0
H18	C18	C17	H18B	120.0	120.0
H18A	C18	C17	H18B	240.0	240.0
N15	C20	N19	C17	2.5	359.7
C16	C17	N19	C18	178.1	180.0
N19	C17	C16	H16	177.9	180.0
N19	C17	C18	H18	360.0	270.0
N19	C17	C18	H18A	120.0	30.0
N19	C17	C18	H18B	240.0	150.0
C17	N19	C20	N21	180.6	179.7
N15	C20	N19	N21	181.8	180.0
N19	C20	N21	HN21	181.8	180.0
N19	C20	N21	HN2A	301.8	0.0
N15	C20	N21	N19	178.2	180.0
HN21	N21	C20	HN2A	240.0	180.0
O2	C1	H1	C10	233.3	240.3
H1	C1	O2	C3	73.8	61.1
O2	C1	H1	H1A	116.6	120.2
H1	C1	C10	C9	262.8	267.8
H1	C1	C10	C11	87.2	87.9
C10	C1	H1	H1A	243.3	239.9
O2	C1	H1A	C10	126.6	119.8
H1A	C1	O2	C3	193.8	181.3
O2	C1	H1A	H1	243.3	239.8
H1A	C1	C10	C9	142.8	147.7
H1A	C1	C10	C11	327.2	327.7
C10	C1	H1A	H1	116.7	120.1
O2	C3	H3	C4	233.7	240.1
O2	C3	H3	H3A	116.8	120.1
H3	C3	C4	C5	34.6	32.5
H3	C3	C4	C9	216.5	212.5
C4	C3	H3	H3A	243.1	239.9
O2	C3	H3A	C4	126.3	119.8
O2	C3	H3A	H3	243.2	239.9
H3A	C3	C4	C5	274.6	272.4
H3A	C3	C4	C9	96.4	92.4
C4	C3	H3A	H3	116.9	120.1
H5	C5	C4	C9	177.9	179.9
C4	C5	H5	C6	180.0	180.0
H5	C5	C6	C7	183.0	180.1
H5	C5	C6	H6	3.1	0.1
C5	C6	H6	C7	180.0	180.0
H6	C6	C5	H5	3.1	0.1
H6	C6	C7	C8	177.9	180.0
H6	C6	C7	H7	357.9	0.0
C6	C7	H7	C8	180.0	180.0
H7	C7	C6	H6	357.9	0.0
H7	C7	C8	C9	180.2	179.9
H7	C7	C8	C13	2.0	359.9
C10	C11	H11	C12	180.0	180.1
H11	C11	C12	C13	176.5	180.0
H11	C11	C12	H12	356.5	360.0
C11	C12	H12	C13	180.0	180.0
H12	C12	C11	H11	356.5	360.0
H12	C12	C13	C14	359.0	0.0
C14	C16	H16	C17	180.0	180.0
H16	C16	C17	C18	356.0	0.0
H16	C16	C17	N19	177.9	180.0
H18	C18	C17	N19	360.0	270.0
C17	C18	H18	H18A	120.0	120.0
C17	C18	H18	H18B	240.0	240.0
H18A	C18	H18	H18B	120.0	120.0
H18A	C18	C17	N19	120.0	30.0
C17	C18	H18A	H18	239.9	240.0
C17	C18	H18A	H18B	120.0	120.0
H18	C18	H18A	H18B	240.1	240.0
H18B	C18	C17	N19	240.0	150.0
C17	C18	H18B	H18	120.0	120.0
C17	C18	H18B	H18A	240.0	240.0
H18	C18	H18B	H18A	120.0	120.0
C20	N21	HN21	HN2A	120.0	180.0
C20	N21	HN2A	HN21	240.0	180.0