PDB Chemical Component B2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for B2

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.404	1.383
C1	C8A	1.399	1.382
C1	H1	1.080	1.080
C2	C3	1.408	1.384
C2	H2	1.080	1.080
C3	C4	1.400	1.383
C3	H3	1.080	1.080
C4	C4A	1.430	1.394
C4	F15	1.304	1.351
C4A	C5	1.431	1.475
C4A	C8A	1.447	1.405
C5	N6	1.345	1.304
C5	N14	1.336	1.379
N6	C7	1.491	1.462
C7	N8	1.486	1.468
C7	C9	1.566	1.507
C7	H7	1.100	1.090
N8	C8A	1.341	1.394
N8	HN8	1.000	0.969
C9	C10	1.353	1.355
C9	S13	1.687	1.785
C10	C11	1.329	1.383
C10	H10	1.080	1.080
C11	C12	1.349	1.355
C11	H11	1.080	1.080
C12	S13	1.673	1.785
C12	H12	1.080	1.080
N14	H141	1.001	0.971
N14	H142	1.000	0.970

Bond Angles for B2

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C8A	120.2	119.6
C2	C1	H1	119.9	120.2
C1	C2	C3	121.3	120.6
C1	C2	H2	119.3	119.7
C8A	C1	H1	119.9	120.1
C1	C8A	C4A	118.8	120.1
C1	C8A	N8	119.3	122.3
C3	C2	H2	119.3	119.7
C2	C3	C4	120.4	120.5
C2	C3	H3	119.8	119.7
C4	C3	H3	119.8	119.8
C3	C4	C4A	118.9	119.4
C3	C4	F15	120.4	120.3
C4A	C4	F15	120.7	120.3
C4	C4A	C5	121.9	121.9
C4	C4A	C8A	120.5	119.7
C5	C4A	C8A	117.6	118.4
C4A	C5	N6	118.4	119.8
C4A	C5	N14	122.2	120.1
C4A	C8A	N8	120.8	117.5
N6	C5	N14	119.4	120.1
C5	N6	C7	121.0	122.0
C5	N14	H141	125.2	120.0
C5	N14	H142	109.6	120.1
N6	C7	N8	108.7	110.4
N6	C7	C9	108.8	109.3
N6	C7	H7	111.0	109.3
N8	C7	C9	111.0	109.2
N8	C7	H7	108.7	109.3
C7	N8	C8A	121.5	118.1
C7	N8	HN8	105.6	121.0
C9	C7	H7	108.6	109.3
C7	C9	C10	123.5	129.0
C7	C9	S13	123.7	129.0
C8A	N8	HN8	105.6	121.0
C10	C9	S13	112.8	101.9
C9	C10	C11	110.4	119.0
C9	C10	H10	124.8	120.5
C9	S13	C12	90.6	98.1
C11	C10	H10	124.8	120.5
C10	C11	C12	115.8	119.0
C10	C11	H11	122.1	120.5
C12	C11	H11	122.1	120.5
C11	C12	S13	110.4	102.0
C11	C12	H12	124.8	129.0
S13	C12	H12	124.8	129.0
H141	N14	H142	125.2	120.0

Torsion Angles for B2

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C8A	C1	C2	H1	180.0	179.9
C2	C1	C8A	C4A	1.4	0.5
C2	C1	C8A	N8	193.1	180.3
C3	C2	C1	H2	180.0	179.9
C1	C2	C3	C4	359.3	0.0
C1	C2	C3	H3	179.3	179.9
C2	C1	C8A	H1	180.0	180.1
C8A	C1	C2	C3	359.8	359.9
C8A	C1	C2	H2	179.8	180.0
C4	C4A	C8A	C1	358.4	359.2
C5	C4A	C8A	C1	178.3	179.9
C4A	C8A	C1	N8	168.3	180.2
C7	N8	C8A	C1	165.9	150.4
C1	C8A	N8	HN8	46.0	330.5
C2	C1	H1	C8A	180.0	179.9
H1	C1	C2	C3	179.8	180.0
H1	C1	C2	H2	359.8	0.1
H1	C1	C8A	C4A	181.3	180.4
H1	C1	C8A	N8	13.0	0.2
C3	C2	C1	C8A	359.8	359.9
C3	C2	C1	H1	179.8	180.0
C1	C2	C3	H2	180.0	180.1
C4	C3	C2	H3	180.0	180.1
C2	C3	C4	C4A	0.5	359.7
C2	C3	C4	F15	180.4	180.0
H2	C2	C1	C8A	179.8	180.0
H2	C2	C1	H1	359.8	0.1
C1	C2	H2	C3	180.0	179.9
H2	C2	C3	C4	179.2	179.9
H2	C2	C3	H3	359.2	359.8
C4	C3	C2	H2	179.2	179.9
C2	C3	C4	H3	180.0	179.9
C4A	C4	C3	F15	180.1	179.6
C3	C4	C4A	C5	180.8	180.0
C3	C4	C4A	C8A	0.7	0.7
H3	C3	C2	H2	359.2	359.8
C2	C3	H3	C4	180.0	180.1
H3	C3	C4	C4A	180.5	179.8
H3	C3	C4	F15	0.4	0.1
C1	C8A	C4A	C4	358.4	359.2
C4A	C4	C3	H3	180.5	179.8
C3	C4	C4A	F15	179.9	180.4
C5	C4A	C4	C8A	180.1	179.3
C4	C4A	C5	N6	180.3	195.1
C4	C4A	C5	N14	0.8	15.4
C4	C4A	C8A	N8	166.5	179.4
F15	C4	C3	H3	0.4	0.1
C3	C4	F15	C4A	180.1	179.6
F15	C4	C4A	C5	0.8	359.7
F15	C4	C4A	C8A	180.7	180.4
C1	C8A	C4A	C5	178.3	179.9
C5	C4A	C4	F15	0.8	359.7
C4	C4A	C5	C8A	179.9	180.7
C5	C4A	C8A	N8	346.4	0.1
N6	C5	C4A	N14	179.5	179.7
C4A	C5	N6	C7	28.4	1.9
C4A	C5	N14	H141	360.0	179.7
C4A	C5	N14	H142	180.0	359.5
C4A	C8A	C1	H1	181.3	180.4
C1	C8A	C4A	N8	191.9	179.8
C8A	C4A	C4	F15	180.7	180.4
C4	C4A	C8A	C5	180.1	179.3
C8A	C4A	C5	N6	0.4	14.4
C8A	C4A	C5	N14	180.9	194.7
C7	N8	C8A	C4A	357.9	330.2
C4A	C8A	N8	HN8	237.9	150.3
N6	C5	C4A	C8A	0.4	14.4
C4A	C5	N6	N14	180.5	180.3
N6	C5	N14	H141	180.5	360.0
N6	C5	N14	H142	0.5	179.7
C5	N6	C7	N8	319.2	330.8
C5	N6	C7	C9	80.3	90.9
C5	N6	C7	H7	199.7	210.5
N14	C5	C4A	C8A	180.9	194.7
C4A	C5	N14	N6	179.5	179.7
N14	C5	N6	C7	207.9	181.6
H141	N14	C5	H142	180.0	180.2
C7	N6	C5	N14	207.9	181.6
N8	C7	N6	C9	239.0	239.9
N8	C7	N6	H7	119.5	120.3
N6	C7	N8	C8A	26.8	43.4
N6	C7	N8	HN8	146.8	223.3
C9	C7	N6	H7	240.6	240.4
N6	C7	C9	C10	62.5	29.7
N6	C7	C9	S13	242.7	210.0
C1	C8A	N8	C7	165.9	150.4
C4A	C8A	N8	C7	357.9	330.2
N6	C7	N8	C9	119.6	120.2
N6	C7	N8	H7	239.1	239.8
C9	C7	N8	H7	119.4	119.6
N8	C7	C9	C10	182.1	150.6
N8	C7	C9	S13	2.3	330.9
C8A	N8	C7	HN8	240.0	180.1
N6	C7	C9	N8	240.4	239.1
N6	C7	C9	H7	120.9	119.6
N8	C7	C9	H7	240.5	240.5
C9	C7	N8	C8A	267.1	283.2
C9	C7	N8	HN8	27.1	103.0
C10	C9	C7	S13	179.8	179.7
C7	C9	C10	C11	180.1	179.8
C7	C9	C10	H10	0.1	0.2
C7	C9	S13	C12	179.9	180.0
N6	C7	H7	N8	119.5	121.0
N6	C7	H7	C9	240.4	240.4
N8	C7	H7	C9	121.0	119.5
H7	C7	N8	C8A	147.7	163.6
H7	C7	N8	HN8	267.7	343.5
H7	C7	C9	C10	301.6	270.2
H7	C7	C9	S13	121.8	90.4
N8	C8A	C1	H1	13.0	0.2
C1	C8A	N8	C4A	168.0	180.2
C8A	N8	C7	C9	267.1	283.2
C8A	N8	C7	H7	147.7	163.6
C7	N8	C8A	HN8	120.0	179.9
HN8	N8	C7	C9	27.1	103.0
HN8	N8	C7	H7	267.7	343.5
C7	N8	HN8	C8A	230.0	180.1
C10	C9	C7	H7	301.6	270.2
C7	C9	C10	S13	180.2	180.2
C10	C9	S13	C12	0.1	0.2
C11	C10	C9	H10	180.0	179.5
C9	C10	C11	C12	360.0	0.5
C9	C10	C11	H11	180.0	180.3
S13	C9	C7	H7	121.8	90.4
C7	C9	S13	C10	179.8	179.8
S13	C9	C10	C11	359.9	359.6
S13	C9	C10	H10	180.0	180.0
C11	C12	S13	C9	359.9	360.0
C9	S13	C12	H12	179.9	180.0
C11	C10	C9	S13	359.9	359.6
C9	C10	C11	H10	180.0	180.5
C12	C11	C10	H11	180.0	180.2
C10	C11	C12	S13	0.1	359.8
C10	C11	C12	H12	180.1	179.8
H10	C10	C9	S13	180.0	180.0
C9	C10	H10	C11	180.0	179.5
H10	C10	C11	C12	179.9	180.0
H10	C10	C11	H11	360.0	359.8
C9	S13	C12	C11	359.9	360.0
C12	C11	C10	H10	179.9	180.0
C10	C11	C12	H11	180.0	179.8
S13	C12	C11	H12	180.0	180.0
H11	C11	C10	H10	360.0	359.8
C10	C11	H11	C12	180.0	180.2
H11	C11	C12	S13	180.1	180.0
H11	C11	C12	H12	0.1	0.0
S13	C12	C11	H11	180.1	180.0
C11	C12	S13	H12	180.0	180.0
H12	C12	C11	H11	0.1	0.0
C11	C12	H12	S13	180.0	180.0
C5	N14	H141	H142	180.0	179.8
C5	N14	H142	H141	180.0	180.2