PDB Chemical Component B1E
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for B1E
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C32 |
C29 |
1.542 |
1.530 |
| N34 |
C30 |
1.160 |
1.136 |
| C30 |
C29 |
1.473 |
1.473 |
| C29 |
C31 |
1.538 |
1.530 |
| C29 |
C25 |
1.539 |
1.506 |
| C25 |
C26 |
1.416 |
1.383 |
| C25 |
C24 |
1.416 |
1.380 |
| C26 |
C27 |
1.414 |
1.384 |
| C24 |
C22 |
1.411 |
1.396 |
| C27 |
C28 |
1.413 |
1.380 |
| C22 |
C28 |
1.414 |
1.396 |
| C22 |
C21 |
1.499 |
1.479 |
| O23 |
C21 |
1.234 |
1.215 |
| C21 |
N20 |
1.368 |
1.347 |
| N20 |
C17 |
1.420 |
1.399 |
| C17 |
C18 |
1.414 |
1.388 |
| C17 |
C16 |
1.412 |
1.389 |
| C18 |
C13 |
1.415 |
1.388 |
| C16 |
C15 |
1.411 |
1.381 |
| C13 |
N12 |
1.353 |
1.397 |
| C13 |
C14 |
1.419 |
1.389 |
| N12 |
C5 |
1.353 |
1.398 |
| C4 |
C5 |
1.413 |
1.394 |
| C4 |
C3 |
1.412 |
1.365 |
| C5 |
C6 |
1.412 |
1.386 |
| C3 |
C2 |
1.411 |
1.396 |
| C6 |
C1 |
1.415 |
1.392 |
| C2 |
C1 |
1.414 |
1.414 |
| C2 |
N10 |
1.407 |
1.357 |
| C15 |
C14 |
1.411 |
1.382 |
| C1 |
C7 |
1.506 |
1.470 |
| N10 |
C9 |
1.305 |
1.298 |
| C14 |
C19 |
1.530 |
1.507 |
| C7 |
O11 |
1.237 |
1.217 |
| C7 |
N8 |
1.376 |
1.353 |
| C9 |
N8 |
1.375 |
1.360 |
| N8 |
C33 |
1.470 |
1.465 |
| C3 |
H1 |
1.080 |
1.081 |
| C4 |
H2 |
1.080 |
1.080 |
| C6 |
H3 |
1.080 |
1.080 |
| C9 |
H4 |
1.080 |
1.080 |
| N12 |
H5 |
1.000 |
0.970 |
| C15 |
H6 |
1.080 |
1.080 |
| C16 |
H7 |
1.080 |
1.080 |
| C18 |
H8 |
1.080 |
1.080 |
| C19 |
H9 |
1.100 |
1.090 |
| C19 |
H10 |
1.100 |
1.090 |
| C19 |
H11 |
1.100 |
1.090 |
| N20 |
H12 |
1.000 |
0.970 |
| C24 |
H13 |
1.080 |
1.080 |
| C26 |
H14 |
1.080 |
1.080 |
| C27 |
H15 |
1.080 |
1.080 |
| C28 |
H16 |
1.080 |
1.080 |
| C31 |
H17 |
1.100 |
1.090 |
| C31 |
H18 |
1.100 |
1.090 |
| C31 |
H19 |
1.100 |
1.090 |
| C32 |
H20 |
1.100 |
1.091 |
| C32 |
H21 |
1.100 |
1.089 |
| C32 |
H22 |
1.100 |
1.090 |
| C33 |
H23 |
1.100 |
1.090 |
| C33 |
H24 |
1.100 |
1.089 |
| C33 |
H25 |
1.100 |
1.090 |
Bond Angles for B1E
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C30 |
C29 |
C31 |
106.4 |
109.5 |
| C29 |
C31 |
H17 |
109.5 |
109.5 |
| C29 |
C31 |
H18 |
109.5 |
109.5 |
| C29 |
C31 |
H19 |
109.5 |
109.5 |
| C25 |
C26 |
C27 |
120.3 |
120.3 |
| C25 |
C26 |
H14 |
119.8 |
119.8 |
| C25 |
C24 |
H13 |
119.7 |
120.1 |
| C26 |
C27 |
C28 |
119.9 |
120.1 |
| C27 |
C26 |
H14 |
119.8 |
119.9 |
| C26 |
C27 |
H15 |
120.0 |
120.0 |
| C24 |
C22 |
C28 |
119.9 |
119.7 |
| C22 |
C28 |
C27 |
120.0 |
119.9 |
| C28 |
C27 |
H15 |
120.0 |
119.9 |
| C27 |
C28 |
H16 |
120.0 |
120.0 |
| C22 |
C28 |
H16 |
120.0 |
120.1 |
| C21 |
N20 |
H12 |
114.8 |
120.0 |
| C17 |
C18 |
H8 |
120.0 |
120.1 |
| C17 |
C16 |
H7 |
119.9 |
119.9 |
| C16 |
C15 |
H6 |
120.0 |
119.9 |
| C13 |
N12 |
H5 |
113.8 |
120.0 |
| C13 |
C14 |
C19 |
121.9 |
120.0 |
| C4 |
C5 |
C6 |
119.3 |
120.4 |
| C5 |
C4 |
H2 |
119.5 |
119.5 |
| C4 |
C3 |
H1 |
120.2 |
120.1 |
| C5 |
C6 |
H3 |
120.1 |
120.3 |
| C3 |
C2 |
N10 |
119.9 |
121.6 |
| C6 |
C1 |
C7 |
120.8 |
122.0 |
| C2 |
C1 |
C7 |
118.6 |
118.0 |
| C2 |
N10 |
C9 |
118.9 |
121.6 |
| C15 |
C14 |
C19 |
117.9 |
120.0 |
| C1 |
C7 |
O11 |
120.4 |
121.3 |
| C1 |
C7 |
N8 |
115.4 |
117.4 |
| N10 |
C9 |
H4 |
117.6 |
118.3 |
| C14 |
C19 |
H9 |
109.5 |
109.4 |
| C14 |
C19 |
H10 |
109.5 |
109.5 |
| C14 |
C19 |
H11 |
109.4 |
109.5 |
| N8 |
C7 |
O11 |
124.2 |
121.3 |
| C7 |
N8 |
C33 |
119.3 |
119.7 |
| C9 |
N8 |
C33 |
118.7 |
119.7 |
| N8 |
C33 |
H23 |
109.5 |
109.4 |
| N8 |
C33 |
H24 |
109.5 |
109.5 |
| N8 |
C33 |
H25 |
109.5 |
109.5 |
| H9 |
C19 |
H10 |
109.4 |
109.4 |
| H9 |
C19 |
H11 |
109.5 |
109.5 |
| H10 |
C19 |
H11 |
109.5 |
109.5 |
| H17 |
C31 |
H18 |
109.5 |
109.4 |
| H17 |
C31 |
H19 |
109.5 |
109.4 |
| H18 |
C31 |
H19 |
109.5 |
109.5 |
| H20 |
C32 |
H21 |
109.5 |
109.5 |
| H20 |
C32 |
H22 |
109.5 |
109.5 |
| H21 |
C32 |
H22 |
109.5 |
109.5 |
| H23 |
C33 |
H24 |
109.5 |
109.5 |
| H23 |
C33 |
H25 |
109.5 |
109.5 |
| H24 |
C33 |
H25 |
109.4 |
109.5 |
Torsion Angles for B1E
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C32 |
C29 |
C31 |
H17 |
180.0 |
300.0 |
| C32 |
C29 |
C31 |
H18 |
300.0 |
59.9 |
| C32 |
C29 |
C31 |
H19 |
60.0 |
180.0 |
| C30 |
C29 |
C31 |
H17 |
64.0 |
180.0 |
| C30 |
C29 |
C31 |
H18 |
184.0 |
300.0 |
| C30 |
C29 |
C31 |
H19 |
304.0 |
60.0 |
| H17 |
C31 |
C29 |
H18 |
240.0 |
240.0 |
| H17 |
C31 |
C29 |
H19 |
120.0 |
120.0 |
| H18 |
C31 |
C29 |
H19 |
240.0 |
240.0 |
| C29 |
C25 |
C26 |
H14 |
0.0 |
0.0 |
| C29 |
C25 |
C24 |
H13 |
359.7 |
359.9 |
| C26 |
C25 |
C24 |
H13 |
180.1 |
180.0 |
| C25 |
C26 |
C27 |
C28 |
0.4 |
359.9 |
| C27 |
C26 |
C25 |
H14 |
180.0 |
180.0 |
| C25 |
C26 |
C27 |
H15 |
180.4 |
180.0 |
| C25 |
C24 |
C22 |
C28 |
0.2 |
359.9 |
| C25 |
C26 |
C27 |
H14 |
180.0 |
180.0 |
| C22 |
C28 |
C27 |
C26 |
359.9 |
0.1 |
| C28 |
C27 |
C26 |
H15 |
180.0 |
180.0 |
| C26 |
C27 |
C28 |
H16 |
180.0 |
180.2 |
| C24 |
C22 |
C28 |
C27 |
359.8 |
360.0 |
| C24 |
C22 |
C28 |
H16 |
179.7 |
179.8 |
| C28 |
C27 |
C26 |
H14 |
180.4 |
180.0 |
| C26 |
C27 |
C28 |
H15 |
180.0 |
180.0 |
| C22 |
C28 |
C27 |
H16 |
180.0 |
179.8 |
| C26 |
C27 |
C28 |
C22 |
359.9 |
0.1 |
| C22 |
C28 |
C27 |
H15 |
179.9 |
180.0 |
| C27 |
C28 |
C22 |
H16 |
180.0 |
180.2 |
| C22 |
C21 |
N20 |
H12 |
358.6 |
354.4 |
| O23 |
C21 |
N20 |
H12 |
178.6 |
174.3 |
| N20 |
C17 |
C18 |
H8 |
0.4 |
359.5 |
| N20 |
C17 |
C16 |
H7 |
359.7 |
0.3 |
| C18 |
C17 |
C16 |
H7 |
180.5 |
179.8 |
| C17 |
C16 |
C15 |
H6 |
179.5 |
180.0 |
| C18 |
C13 |
N12 |
H5 |
66.3 |
187.6 |
| C18 |
C13 |
C14 |
C19 |
179.8 |
180.2 |
| C16 |
C15 |
C14 |
C19 |
180.2 |
180.0 |
| C14 |
C13 |
N12 |
H5 |
245.6 |
7.9 |
| C15 |
C14 |
C13 |
C19 |
179.8 |
180.1 |
| C13 |
C14 |
C19 |
H9 |
89.9 |
90.1 |
| C13 |
C14 |
C19 |
H10 |
209.9 |
210.0 |
| C13 |
C14 |
C19 |
H11 |
329.9 |
330.0 |
| N12 |
C5 |
C4 |
H2 |
0.3 |
0.4 |
| N12 |
C5 |
C6 |
H3 |
359.7 |
359.6 |
| C5 |
C4 |
C3 |
H1 |
180.0 |
180.0 |
| C4 |
C5 |
C6 |
H3 |
180.1 |
180.0 |
| C4 |
C3 |
C2 |
N10 |
180.0 |
180.0 |
| C6 |
C5 |
C4 |
H2 |
179.9 |
180.0 |
| C5 |
C6 |
C1 |
C7 |
179.9 |
179.7 |
| C3 |
C2 |
C1 |
C7 |
180.1 |
180.0 |
| C3 |
C2 |
N10 |
C9 |
179.8 |
180.0 |
| C2 |
C1 |
C6 |
C7 |
179.9 |
179.7 |
| C6 |
C1 |
C7 |
O11 |
0.0 |
359.7 |
| C6 |
C1 |
C7 |
N8 |
180.0 |
179.7 |
| C6 |
C1 |
C2 |
C7 |
180.1 |
180.3 |
| C2 |
C1 |
C7 |
O11 |
180.1 |
180.0 |
| C2 |
C1 |
C7 |
N8 |
0.1 |
360.0 |
| N10 |
C2 |
C1 |
C7 |
0.0 |
0.0 |
| C2 |
N10 |
C9 |
H4 |
180.1 |
180.0 |
| C13 |
C14 |
C15 |
C19 |
180.2 |
179.9 |
| C15 |
C14 |
C19 |
H9 |
270.1 |
270.0 |
| C15 |
C14 |
C19 |
H10 |
30.1 |
29.9 |
| C15 |
C14 |
C19 |
H11 |
150.1 |
149.9 |
| N8 |
C7 |
C1 |
O11 |
180.0 |
180.0 |
| C1 |
C7 |
N8 |
C33 |
179.8 |
180.0 |
| N10 |
C9 |
N8 |
C33 |
180.1 |
180.0 |
| H9 |
C19 |
C14 |
H10 |
240.0 |
240.1 |
| H9 |
C19 |
C14 |
H11 |
120.0 |
120.0 |
| H10 |
C19 |
C14 |
H11 |
240.0 |
240.0 |
| C1 |
C7 |
O11 |
N8 |
180.0 |
180.0 |
| O11 |
C7 |
N8 |
C33 |
359.8 |
0.0 |
| C1 |
C7 |
N8 |
O11 |
180.0 |
180.0 |
| C9 |
N8 |
C7 |
C33 |
180.1 |
180.0 |
| C7 |
N8 |
C33 |
H23 |
180.0 |
90.0 |
| C7 |
N8 |
C33 |
H24 |
300.0 |
210.0 |
| C7 |
N8 |
C33 |
H25 |
60.0 |
330.0 |
| C2 |
N10 |
C9 |
N8 |
0.1 |
0.0 |
| C9 |
N8 |
C7 |
O11 |
179.9 |
180.0 |
| C7 |
N8 |
C9 |
C33 |
179.9 |
180.0 |
| C9 |
N8 |
C33 |
H23 |
359.9 |
270.0 |
| C9 |
N8 |
C33 |
H24 |
119.9 |
30.0 |
| C9 |
N8 |
C33 |
H25 |
239.9 |
150.0 |
| C33 |
N8 |
C7 |
O11 |
359.8 |
0.0 |
| H23 |
C33 |
N8 |
H24 |
240.0 |
240.0 |
| H23 |
C33 |
N8 |
H25 |
120.0 |
120.0 |
| H24 |
C33 |
N8 |
H25 |
240.0 |
240.0 |
| H1 |
C3 |
C2 |
N10 |
0.0 |
0.0 |
| H2 |
C4 |
C5 |
C6 |
179.9 |
180.0 |
| H2 |
C4 |
C3 |
H1 |
0.0 |
359.6 |
| H3 |
C6 |
C1 |
C7 |
359.9 |
0.3 |
| H4 |
C9 |
N8 |
C33 |
0.1 |
0.0 |
| H6 |
C15 |
C14 |
C19 |
0.2 |
0.1 |
| H7 |
C16 |
C15 |
H6 |
359.5 |
359.9 |
| C14 |
C19 |
H9 |
H10 |
120.0 |
119.9 |
| C14 |
C19 |
H9 |
H11 |
240.0 |
240.0 |
| H10 |
C19 |
H9 |
H11 |
120.0 |
120.0 |
| C14 |
C19 |
H10 |
H9 |
239.9 |
240.1 |
| C14 |
C19 |
H10 |
H11 |
120.0 |
120.0 |
| H9 |
C19 |
H10 |
H11 |
240.0 |
240.0 |
| C14 |
C19 |
H11 |
H9 |
120.0 |
120.0 |
| C14 |
C19 |
H11 |
H10 |
240.0 |
240.0 |
| H9 |
C19 |
H11 |
H10 |
120.0 |
120.0 |
| H13 |
C24 |
C22 |
C28 |
180.2 |
180.0 |
| C25 |
C26 |
H14 |
C27 |
180.0 |
180.0 |
| H14 |
C26 |
C27 |
C28 |
180.4 |
180.0 |
| H14 |
C26 |
C27 |
H15 |
0.4 |
360.0 |
| C26 |
C27 |
H15 |
C28 |
180.0 |
180.0 |
| H15 |
C27 |
C26 |
H14 |
0.4 |
360.0 |
| H15 |
C27 |
C28 |
H16 |
360.0 |
0.2 |
| C22 |
C28 |
H16 |
C27 |
180.0 |
180.2 |
| H16 |
C28 |
C27 |
H15 |
360.0 |
0.2 |
| C29 |
C31 |
H17 |
H18 |
120.0 |
120.0 |
| C29 |
C31 |
H17 |
H19 |
240.0 |
240.0 |
| H18 |
C31 |
H17 |
H19 |
120.0 |
120.0 |
| C29 |
C31 |
H18 |
H17 |
240.0 |
240.0 |
| C29 |
C31 |
H18 |
H19 |
120.0 |
120.0 |
| H17 |
C31 |
H18 |
H19 |
240.0 |
240.1 |
| C29 |
C31 |
H19 |
H17 |
120.0 |
120.0 |
| C29 |
C31 |
H19 |
H18 |
240.0 |
239.9 |
| H17 |
C31 |
H19 |
H18 |
120.0 |
119.9 |
| H21 |
C32 |
H20 |
H22 |
120.0 |
120.0 |
| H20 |
C32 |
H21 |
H22 |
240.0 |
240.0 |
| H20 |
C32 |
H22 |
H21 |
120.0 |
120.0 |
| N8 |
C33 |
H23 |
H24 |
120.0 |
120.0 |
| N8 |
C33 |
H23 |
H25 |
240.0 |
240.0 |
| H24 |
C33 |
H23 |
H25 |
120.0 |
120.0 |
| N8 |
C33 |
H24 |
H23 |
240.0 |
240.0 |
| N8 |
C33 |
H24 |
H25 |
120.0 |
120.0 |
| H23 |
C33 |
H24 |
H25 |
240.0 |
240.0 |
| N8 |
C33 |
H25 |
H23 |
120.0 |
120.0 |
| N8 |
C33 |
H25 |
H24 |
240.0 |
240.0 |
| H23 |
C33 |
H25 |
H24 |
120.0 |
120.0 |