PDB Chemical Component AZR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AZR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C7 |
C18 |
1.566 |
1.530 |
| S8 |
C26 |
1.773 |
1.761 |
| O10 |
C21 |
1.230 |
1.216 |
| O11 |
N14 |
1.505 |
1.416 |
| O11 |
C23 |
1.495 |
1.430 |
| N12 |
C18 |
1.432 |
1.466 |
| N12 |
S17 |
1.699 |
1.657 |
| N15 |
C26 |
1.357 |
1.297 |
| S17 |
O33 |
1.455 |
1.522 |
| C19 |
N13 |
1.476 |
1.464 |
| C19 |
C18 |
1.530 |
1.530 |
| C19 |
C20 |
1.599 |
1.507 |
| C20 |
O9 |
1.280 |
1.207 |
| C21 |
N13 |
1.357 |
1.348 |
| C21 |
C22 |
1.514 |
1.482 |
| C22 |
N14 |
1.324 |
1.302 |
| C22 |
C24 |
1.486 |
1.479 |
| C23 |
C29 |
1.564 |
1.507 |
| C23 |
C28 |
1.512 |
1.530 |
| C24 |
N15 |
1.443 |
1.333 |
| C25 |
S8 |
1.739 |
1.762 |
| C25 |
C24 |
1.398 |
1.348 |
| C26 |
N16 |
1.361 |
1.384 |
| C27 |
C23 |
1.511 |
1.530 |
| C29 |
O31 |
1.295 |
1.341 |
| O30 |
C29 |
1.234 |
1.208 |
| O32 |
S17 |
1.492 |
1.421 |
| O34 |
S17 |
1.427 |
1.421 |
| C7 |
H7 |
1.099 |
1.089 |
| C7 |
H7A |
1.100 |
1.090 |
| C7 |
H7B |
1.100 |
1.090 |
| N12 |
HN12 |
1.000 |
0.970 |
| N13 |
HN13 |
1.000 |
0.970 |
| N16 |
HN16 |
1.000 |
0.970 |
| N16 |
HN1A |
1.000 |
0.970 |
| C18 |
H18 |
1.100 |
1.089 |
| C19 |
H19 |
1.100 |
1.090 |
| C20 |
H20 |
1.080 |
1.081 |
| C25 |
H25 |
1.080 |
1.079 |
| C27 |
H27 |
1.100 |
1.089 |
| C27 |
H27A |
1.100 |
1.090 |
| C27 |
H27B |
1.100 |
1.090 |
| C28 |
H28 |
1.100 |
1.090 |
| C28 |
H28A |
1.100 |
1.090 |
| C28 |
H28B |
1.100 |
1.089 |
| O31 |
HO31 |
0.950 |
0.967 |
| O33 |
HO33 |
0.950 |
0.967 |
Bond Angles for AZR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C18 |
N12 |
106.8 |
109.5 |
| C18 |
C7 |
H7 |
109.5 |
109.5 |
| C18 |
C7 |
H7A |
109.5 |
109.5 |
| C18 |
C7 |
H7B |
109.5 |
109.5 |
| C7 |
C18 |
H18 |
112.0 |
109.5 |
| S8 |
C26 |
N15 |
116.8 |
109.5 |
| C25 |
S8 |
C26 |
89.2 |
90.1 |
| S8 |
C26 |
N16 |
116.4 |
125.2 |
| O10 |
C21 |
N13 |
120.6 |
120.0 |
| O10 |
C21 |
C22 |
125.9 |
120.0 |
| N14 |
O11 |
C23 |
119.8 |
114.0 |
| O11 |
C23 |
C29 |
113.7 |
109.5 |
| O11 |
C23 |
C28 |
111.6 |
109.5 |
| S17 |
N12 |
C18 |
126.6 |
120.0 |
| C18 |
N12 |
HN12 |
105.0 |
120.0 |
| N12 |
C18 |
H18 |
114.2 |
109.4 |
| N12 |
S17 |
O33 |
109.8 |
107.2 |
| S17 |
N12 |
HN12 |
105.1 |
120.0 |
| C24 |
N15 |
C26 |
106.9 |
116.9 |
| N15 |
C26 |
N16 |
126.8 |
125.3 |
| O32 |
S17 |
O33 |
106.7 |
106.5 |
| S17 |
O33 |
HO33 |
109.5 |
113.9 |
| C19 |
N13 |
HN13 |
118.0 |
120.0 |
| C19 |
C18 |
H18 |
112.6 |
109.5 |
| C20 |
C19 |
H19 |
112.6 |
109.5 |
| C19 |
C20 |
H20 |
118.0 |
120.0 |
| C21 |
N13 |
HN13 |
118.0 |
120.0 |
| C21 |
C22 |
C24 |
123.8 |
120.0 |
| C28 |
C23 |
C29 |
117.5 |
109.5 |
| C27 |
C23 |
C29 |
99.1 |
109.5 |
| C23 |
C29 |
O31 |
124.6 |
120.0 |
| C27 |
C23 |
C28 |
103.1 |
109.5 |
| C23 |
C28 |
H28 |
109.5 |
109.5 |
| C23 |
C28 |
H28A |
109.4 |
109.5 |
| C23 |
C28 |
H28B |
109.5 |
109.5 |
| C26 |
N16 |
HN16 |
109.5 |
120.0 |
| C26 |
N16 |
HN1A |
109.5 |
120.1 |
| O30 |
C29 |
O31 |
120.8 |
120.0 |
| C29 |
O31 |
HO31 |
109.5 |
117.0 |
| H7 |
C7 |
H7A |
109.5 |
109.5 |
| H7 |
C7 |
H7B |
109.4 |
109.4 |
| H7A |
C7 |
H7B |
109.5 |
109.5 |
| HN16 |
N16 |
HN1A |
109.5 |
120.0 |
| H27 |
C27 |
H27A |
109.5 |
109.4 |
| H27 |
C27 |
H27B |
109.5 |
109.5 |
| H27A |
C27 |
H27B |
109.5 |
109.5 |
| H28 |
C28 |
H28A |
109.5 |
109.4 |
| H28 |
C28 |
H28B |
109.5 |
109.5 |
| H28A |
C28 |
H28B |
109.5 |
109.4 |
Torsion Angles for AZR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| S17 |
N12 |
C18 |
C7 |
108.6 |
95.0 |
| C7 |
C18 |
N12 |
HN12 |
230.9 |
275.0 |
| N12 |
C18 |
C7 |
H18 |
234.2 |
240.0 |
| C19 |
C18 |
C7 |
H18 |
119.2 |
120.0 |
| H7 |
C7 |
C18 |
H7A |
240.0 |
239.9 |
| H7 |
C7 |
C18 |
H7B |
120.0 |
120.0 |
| H7A |
C7 |
C18 |
H7B |
240.0 |
240.0 |
| C24 |
N15 |
C26 |
S8 |
0.7 |
360.0 |
| N15 |
C26 |
S8 |
N16 |
179.0 |
180.0 |
| S8 |
C26 |
N16 |
HN16 |
0.0 |
360.0 |
| S8 |
C26 |
N16 |
HN1A |
120.0 |
180.1 |
| O10 |
C21 |
N13 |
HN13 |
178.4 |
174.7 |
| O10 |
C21 |
C22 |
C24 |
109.4 |
185.4 |
| N14 |
O11 |
C23 |
C29 |
306.9 |
180.0 |
| N14 |
O11 |
C23 |
C28 |
82.5 |
59.9 |
| C28 |
C23 |
O11 |
C29 |
135.7 |
239.9 |
| C27 |
C23 |
O11 |
C29 |
249.7 |
120.0 |
| O11 |
C23 |
C29 |
O31 |
158.0 |
180.0 |
| C27 |
C23 |
O11 |
C28 |
114.0 |
240.1 |
| O11 |
C23 |
C28 |
H28 |
180.0 |
60.1 |
| O11 |
C23 |
C28 |
H28A |
300.0 |
180.0 |
| O11 |
C23 |
C28 |
H28B |
60.0 |
300.0 |
| N12 |
C18 |
C7 |
H7 |
180.0 |
180.0 |
| N12 |
C18 |
C7 |
H7A |
300.0 |
300.0 |
| N12 |
C18 |
C7 |
H7B |
60.0 |
60.0 |
| C7 |
C18 |
N12 |
H18 |
124.5 |
120.0 |
| C18 |
N12 |
S17 |
O33 |
38.9 |
65.1 |
| S17 |
N12 |
C18 |
HN12 |
237.7 |
180.0 |
| C19 |
C18 |
N12 |
H18 |
231.8 |
240.0 |
| C7 |
C18 |
N12 |
S17 |
108.6 |
95.0 |
| C18 |
N12 |
S17 |
HN12 |
122.3 |
180.0 |
| S17 |
N12 |
C18 |
H18 |
344.1 |
335.0 |
| O32 |
S17 |
N12 |
O33 |
246.8 |
246.4 |
| N12 |
S17 |
O33 |
HO33 |
249.5 |
180.0 |
| C25 |
S8 |
C26 |
N15 |
358.8 |
0.0 |
| S8 |
C26 |
N15 |
N16 |
181.1 |
180.0 |
| N15 |
C26 |
N16 |
HN16 |
181.1 |
179.9 |
| N15 |
C26 |
N16 |
HN1A |
301.1 |
0.0 |
| O33 |
S17 |
N12 |
C18 |
38.9 |
65.1 |
| O33 |
S17 |
N12 |
HN12 |
276.6 |
245.0 |
| O10 |
C21 |
N13 |
C19 |
358.3 |
354.8 |
| C21 |
N13 |
C19 |
HN13 |
180.0 |
179.9 |
| C19 |
C18 |
C7 |
H7 |
65.0 |
60.0 |
| C19 |
C18 |
C7 |
H7A |
185.0 |
180.1 |
| C19 |
C18 |
C7 |
H7B |
305.0 |
300.0 |
| C7 |
C18 |
C19 |
H18 |
241.2 |
240.0 |
| C19 |
C18 |
N12 |
HN12 |
338.2 |
35.0 |
| N12 |
C18 |
C19 |
H18 |
129.1 |
120.0 |
| C18 |
C19 |
N13 |
HN13 |
290.3 |
335.1 |
| C20 |
C19 |
N13 |
HN13 |
42.9 |
95.0 |
| C20 |
C19 |
C18 |
H18 |
284.7 |
300.1 |
| O10 |
C21 |
N13 |
C22 |
178.3 |
180.1 |
| C19 |
N13 |
C21 |
HN13 |
180.0 |
180.1 |
| O10 |
C21 |
C22 |
N13 |
181.8 |
179.9 |
| C22 |
C21 |
N13 |
HN13 |
0.1 |
354.6 |
| O10 |
C21 |
C22 |
N14 |
288.6 |
5.3 |
| C22 |
N14 |
O11 |
C23 |
202.5 |
180.0 |
| C22 |
C24 |
N15 |
C26 |
180.4 |
180.0 |
| O11 |
C23 |
C29 |
C28 |
132.9 |
240.0 |
| C27 |
C23 |
C29 |
C28 |
250.0 |
120.1 |
| C29 |
C23 |
C28 |
H28 |
313.8 |
300.0 |
| C29 |
C23 |
C28 |
H28A |
73.9 |
60.0 |
| C29 |
C23 |
C28 |
H28B |
193.8 |
180.0 |
| O30 |
C29 |
C23 |
O31 |
177.4 |
180.0 |
| C23 |
C29 |
O31 |
HO31 |
177.3 |
180.0 |
| O11 |
C23 |
C28 |
C29 |
226.2 |
120.0 |
| C27 |
C23 |
C28 |
C29 |
107.8 |
239.9 |
| C28 |
C23 |
C29 |
O31 |
25.1 |
300.0 |
| H28 |
C28 |
C23 |
H28A |
240.0 |
240.0 |
| H28 |
C28 |
C23 |
H28B |
120.0 |
120.0 |
| H28A |
C28 |
C23 |
H28B |
240.0 |
240.0 |
| S8 |
C26 |
N15 |
C24 |
0.7 |
360.0 |
| C24 |
N15 |
C26 |
N16 |
179.6 |
180.0 |
| C25 |
S8 |
C26 |
N16 |
179.8 |
180.0 |
| C24 |
C25 |
S8 |
C26 |
1.3 |
360.0 |
| C25 |
C24 |
N15 |
C26 |
0.3 |
0.0 |
| S8 |
C26 |
N16 |
N15 |
178.9 |
180.0 |
| HN16 |
N16 |
C26 |
HN1A |
240.0 |
179.9 |
| O11 |
C23 |
C27 |
C29 |
119.6 |
240.0 |
| O11 |
C23 |
C27 |
C28 |
240.7 |
119.9 |
| C28 |
C23 |
C27 |
C29 |
238.8 |
120.1 |
| C27 |
C23 |
C29 |
O31 |
275.1 |
60.1 |
| C27 |
C23 |
C28 |
H28 |
61.6 |
180.0 |
| C27 |
C23 |
C28 |
H28A |
181.6 |
299.9 |
| C27 |
C23 |
C28 |
H28B |
301.6 |
59.9 |
| C23 |
C29 |
O30 |
O31 |
182.5 |
180.0 |
| O30 |
C29 |
O31 |
HO31 |
360.0 |
0.1 |
| N12 |
S17 |
O32 |
O33 |
115.4 |
114.1 |
| O32 |
S17 |
N12 |
HN12 |
163.4 |
131.4 |
| O32 |
S17 |
O33 |
HO33 |
0.0 |
293.5 |
| O34 |
S17 |
N12 |
HN12 |
44.6 |
358.5 |
| O34 |
S17 |
O33 |
HO33 |
124.1 |
66.5 |
| H7 |
C7 |
C18 |
N12 |
180.0 |
180.0 |
| C18 |
C7 |
H7 |
H7A |
120.0 |
120.0 |
| C18 |
C7 |
H7 |
H7B |
240.0 |
240.0 |
| H7 |
C7 |
C18 |
H18 |
305.8 |
299.9 |
| H7A |
C7 |
H7 |
H7B |
120.0 |
120.0 |
| H7A |
C7 |
C18 |
N12 |
300.0 |
300.0 |
| C18 |
C7 |
H7A |
H7 |
240.0 |
240.0 |
| C18 |
C7 |
H7A |
H7B |
120.0 |
120.0 |
| H7A |
C7 |
C18 |
H18 |
65.8 |
60.0 |
| H7 |
C7 |
H7A |
H7B |
240.1 |
240.0 |
| H7B |
C7 |
C18 |
N12 |
60.0 |
60.0 |
| C18 |
C7 |
H7B |
H7 |
120.0 |
120.0 |
| C18 |
C7 |
H7B |
H7A |
240.0 |
240.0 |
| H7B |
C7 |
C18 |
H18 |
185.8 |
180.0 |
| H7 |
C7 |
H7B |
H7A |
120.0 |
120.1 |
| S17 |
N12 |
HN12 |
C18 |
135.4 |
180.0 |
| HN12 |
N12 |
C18 |
H18 |
106.4 |
155.0 |
| HN12 |
N12 |
S17 |
O33 |
276.6 |
245.0 |
| C26 |
N16 |
HN16 |
HN1A |
120.0 |
180.1 |
| C26 |
N16 |
HN1A |
HN16 |
240.0 |
179.9 |
| C7 |
C18 |
H18 |
N12 |
238.4 |
240.0 |
| H18 |
C18 |
C7 |
H7 |
305.8 |
299.9 |
| H18 |
C18 |
C7 |
H7A |
65.8 |
60.0 |
| H18 |
C18 |
C7 |
H7B |
185.8 |
180.0 |
| H18 |
C18 |
N12 |
HN12 |
106.4 |
155.0 |
| H19 |
C19 |
N13 |
HN13 |
163.7 |
215.1 |
| H19 |
C19 |
C18 |
H18 |
158.8 |
180.1 |
| H19 |
C19 |
C20 |
H20 |
1.7 |
60.0 |
| H20 |
C20 |
C19 |
H19 |
1.7 |
60.0 |
| H25 |
C25 |
S8 |
C26 |
181.3 |
179.9 |
| H27 |
C27 |
C23 |
C29 |
60.4 |
180.0 |
| H27 |
C27 |
C23 |
C28 |
299.3 |
300.1 |
| H27A |
C27 |
H27 |
H27B |
120.0 |
120.0 |
| H27A |
C27 |
C23 |
C29 |
180.4 |
300.0 |
| H27A |
C27 |
C23 |
C28 |
59.3 |
60.1 |
| H27 |
C27 |
H27A |
H27B |
239.9 |
239.9 |
| H27B |
C27 |
C23 |
C29 |
300.4 |
59.9 |
| H27B |
C27 |
C23 |
C28 |
179.2 |
180.0 |
| H27 |
C27 |
H27B |
H27A |
120.0 |
120.0 |
| H28 |
C28 |
C23 |
C29 |
313.8 |
300.0 |
| C23 |
C28 |
H28 |
H28A |
120.0 |
120.0 |
| C23 |
C28 |
H28 |
H28B |
240.0 |
239.9 |
| H28A |
C28 |
H28 |
H28B |
120.0 |
119.9 |
| H28A |
C28 |
C23 |
C29 |
73.9 |
60.0 |
| C23 |
C28 |
H28A |
H28 |
240.0 |
240.0 |
| C23 |
C28 |
H28A |
H28B |
120.0 |
120.1 |
| H28 |
C28 |
H28A |
H28B |
240.0 |
240.0 |
| H28B |
C28 |
C23 |
C29 |
193.8 |
180.0 |
| C23 |
C28 |
H28B |
H28 |
120.0 |
120.0 |
| C23 |
C28 |
H28B |
H28A |
240.0 |
240.0 |
| H28 |
C28 |
H28B |
H28A |
120.0 |
119.9 |