PDB Chemical Component AZM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AZM
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
N3 |
1.280 |
1.318 |
C1 |
S1 |
1.765 |
1.762 |
C1 |
S2 |
1.695 |
1.787 |
C2 |
N2 |
1.340 |
1.322 |
C2 |
N4 |
1.406 |
1.391 |
C2 |
S2 |
1.708 |
1.739 |
C3 |
C4 |
1.463 |
1.507 |
C3 |
N4 |
1.361 |
1.347 |
C3 |
O3 |
1.234 |
1.213 |
C4 |
H41 |
1.116 |
1.089 |
C4 |
H42 |
1.115 |
1.089 |
C4 |
H43 |
1.115 |
1.090 |
N1 |
S1 |
1.576 |
1.656 |
N1 |
HN11 |
1.020 |
0.970 |
N1 |
HN12 |
1.019 |
0.970 |
N2 |
N3 |
1.357 |
1.261 |
N4 |
HN4 |
1.019 |
0.969 |
O1 |
S1 |
1.469 |
1.420 |
O2 |
S1 |
1.398 |
1.420 |
Bond Angles for AZM
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N3 |
C1 |
S1 |
122.3 |
129.9 |
N3 |
C1 |
S2 |
116.3 |
100.1 |
C1 |
N3 |
N2 |
110.8 |
120.7 |
S1 |
C1 |
S2 |
121.4 |
129.9 |
C1 |
S1 |
N1 |
105.5 |
107.4 |
C1 |
S1 |
O1 |
101.6 |
105.7 |
C1 |
S1 |
O2 |
111.7 |
105.8 |
C1 |
S2 |
C2 |
87.5 |
96.5 |
N2 |
C2 |
N4 |
131.9 |
129.6 |
N2 |
C2 |
S2 |
111.5 |
100.8 |
C2 |
N2 |
N3 |
113.7 |
121.8 |
N4 |
C2 |
S2 |
114.3 |
129.6 |
C2 |
N4 |
C3 |
120.5 |
120.0 |
C2 |
N4 |
HN4 |
121.4 |
120.0 |
C4 |
C3 |
N4 |
119.0 |
120.0 |
C4 |
C3 |
O3 |
118.4 |
120.0 |
C3 |
C4 |
H41 |
119.0 |
109.6 |
C3 |
C4 |
H42 |
108.8 |
109.5 |
C3 |
C4 |
H43 |
108.8 |
109.5 |
N4 |
C3 |
O3 |
122.6 |
120.0 |
C3 |
N4 |
HN4 |
118.1 |
120.0 |
H41 |
C4 |
H42 |
108.8 |
109.5 |
H41 |
C4 |
H43 |
108.8 |
109.4 |
H42 |
C4 |
H43 |
101.3 |
109.4 |
S1 |
N1 |
HN11 |
105.5 |
120.0 |
S1 |
N1 |
HN12 |
113.7 |
120.0 |
N1 |
S1 |
O1 |
106.9 |
105.8 |
N1 |
S1 |
O2 |
111.8 |
105.7 |
HN11 |
N1 |
HN12 |
113.7 |
120.0 |
O1 |
S1 |
O2 |
118.1 |
125.4 |
Torsion Angles for AZM
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
S1 |
C1 |
N3 |
S2 |
178.0 |
180.0 |
N3 |
C1 |
S1 |
N1 |
306.4 |
-0.0 |
N3 |
C1 |
S1 |
O1 |
195.0 |
112.6 |
N3 |
C1 |
S1 |
O2 |
68.2 |
247.4 |
N3 |
C1 |
S2 |
C2 |
3.1 |
-0.0 |
C2 |
N2 |
N3 |
C1 |
5.4 |
0.5 |
N3 |
C1 |
S1 |
S2 |
182.1 |
180.0 |
S1 |
C1 |
N3 |
N2 |
172.6 |
179.7 |
S1 |
C1 |
S2 |
C2 |
185.1 |
180.0 |
C1 |
S1 |
N1 |
HN11 |
180.0 |
179.9 |
C1 |
S1 |
N1 |
HN12 |
54.8 |
0.1 |
N1 |
S1 |
C1 |
O1 |
111.5 |
247.4 |
N1 |
S1 |
C1 |
O2 |
238.3 |
112.6 |
O1 |
S1 |
C1 |
O2 |
126.8 |
225.2 |
N3 |
C1 |
S2 |
S1 |
178.0 |
180.0 |
S2 |
C1 |
N3 |
N2 |
354.7 |
359.7 |
S2 |
C1 |
S1 |
N1 |
124.3 |
180.0 |
S2 |
C1 |
S1 |
O1 |
12.8 |
292.6 |
S2 |
C1 |
S1 |
O2 |
246.0 |
67.4 |
N2 |
C2 |
S2 |
C1 |
0.2 |
0.2 |
N4 |
C2 |
S2 |
C1 |
195.4 |
180.0 |
C1 |
N3 |
N2 |
C2 |
5.4 |
0.5 |
C1 |
S2 |
C2 |
N2 |
0.2 |
0.2 |
N4 |
C2 |
N2 |
S2 |
161.2 |
180.2 |
N2 |
C2 |
N4 |
C3 |
195.2 |
359.7 |
N2 |
C2 |
N4 |
HN4 |
15.2 |
179.7 |
C1 |
S2 |
C2 |
N4 |
195.4 |
180.0 |
N2 |
C2 |
N4 |
S2 |
199.2 |
179.7 |
N4 |
C2 |
N2 |
N3 |
158.1 |
179.8 |
C4 |
C3 |
N4 |
C2 |
191.4 |
180.0 |
C2 |
N4 |
C3 |
O3 |
11.8 |
359.9 |
C3 |
N4 |
C2 |
HN4 |
180.0 |
180.0 |
N2 |
C2 |
S2 |
N4 |
164.8 |
180.2 |
S2 |
C2 |
N2 |
N3 |
356.9 |
359.6 |
S2 |
C2 |
N4 |
C3 |
356.0 |
180.0 |
S2 |
C2 |
N4 |
HN4 |
176.0 |
-0.0 |
C2 |
N4 |
C3 |
C4 |
191.4 |
180.0 |
N4 |
C3 |
C4 |
O3 |
180.4 |
179.9 |
C4 |
C3 |
N4 |
HN4 |
11.5 |
-0.0 |
H41 |
C4 |
C3 |
H42 |
234.8 |
239.9 |
H41 |
C4 |
C3 |
H43 |
125.2 |
120.0 |
H42 |
C4 |
C3 |
H43 |
250.5 |
240.1 |
C3 |
N4 |
C2 |
S2 |
356.0 |
180.0 |
C2 |
N4 |
C3 |
HN4 |
180.0 |
180.0 |
C4 |
C3 |
N4 |
O3 |
179.6 |
180.1 |
N4 |
C3 |
C4 |
H41 |
180.0 |
179.9 |
N4 |
C3 |
C4 |
H42 |
305.2 |
300.0 |
N4 |
C3 |
C4 |
H43 |
54.8 |
60.0 |
C4 |
C3 |
O3 |
N4 |
180.4 |
179.9 |
O3 |
C3 |
C4 |
H41 |
359.6 |
360.0 |
O3 |
C3 |
C4 |
H42 |
124.9 |
120.1 |
O3 |
C3 |
C4 |
H43 |
234.4 |
240.0 |
O3 |
C3 |
N4 |
HN4 |
191.8 |
179.9 |
H41 |
C4 |
C3 |
N4 |
180.0 |
179.9 |
H41 |
C4 |
C3 |
O3 |
359.6 |
360.0 |
C3 |
C4 |
H41 |
H42 |
125.2 |
120.1 |
C3 |
C4 |
H41 |
H43 |
234.8 |
240.0 |
H42 |
C4 |
H41 |
H43 |
109.5 |
119.9 |
H42 |
C4 |
C3 |
N4 |
305.2 |
300.0 |
H42 |
C4 |
C3 |
O3 |
124.9 |
120.1 |
C3 |
C4 |
H42 |
H41 |
229.0 |
239.9 |
C3 |
C4 |
H42 |
H43 |
114.5 |
120.0 |
H41 |
C4 |
H42 |
H43 |
245.5 |
240.1 |
H43 |
C4 |
C3 |
N4 |
54.8 |
60.0 |
H43 |
C4 |
C3 |
O3 |
234.4 |
240.0 |
C3 |
C4 |
H43 |
H41 |
131.0 |
120.1 |
C3 |
C4 |
H43 |
H42 |
245.5 |
240.0 |
H41 |
C4 |
H43 |
H42 |
114.5 |
120.0 |
N1 |
S1 |
C1 |
S2 |
124.3 |
180.0 |
C1 |
S1 |
N1 |
O1 |
252.4 |
112.6 |
C1 |
S1 |
N1 |
O2 |
121.6 |
247.4 |
HN11 |
N1 |
S1 |
HN12 |
125.2 |
179.9 |
O1 |
S1 |
N1 |
O2 |
229.3 |
134.8 |
S1 |
N1 |
HN11 |
HN12 |
234.8 |
180.1 |
HN11 |
N1 |
S1 |
O1 |
287.6 |
67.4 |
HN11 |
N1 |
S1 |
O2 |
58.4 |
292.5 |
S1 |
N1 |
HN12 |
HN11 |
120.7 |
179.9 |
HN12 |
N1 |
S1 |
O1 |
162.4 |
247.5 |
HN12 |
N1 |
S1 |
O2 |
293.1 |
112.7 |
N2 |
N3 |
C1 |
S1 |
172.6 |
179.7 |
N2 |
N3 |
C1 |
S2 |
354.7 |
359.7 |
N3 |
N2 |
C2 |
N4 |
158.1 |
179.8 |
N3 |
N2 |
C2 |
S2 |
356.9 |
359.6 |
HN4 |
N4 |
C2 |
S2 |
176.0 |
-0.0 |
C2 |
N4 |
HN4 |
C3 |
180.0 |
180.0 |
HN4 |
N4 |
C3 |
O3 |
191.8 |
179.9 |
O1 |
S1 |
C1 |
S2 |
12.8 |
292.6 |
C1 |
S1 |
O1 |
N1 |
110.4 |
246.3 |
C1 |
S1 |
O1 |
O2 |
237.5 |
123.2 |
O1 |
S1 |
N1 |
HN11 |
287.6 |
67.4 |
O1 |
S1 |
N1 |
HN12 |
162.4 |
247.5 |
N1 |
S1 |
O1 |
O2 |
127.1 |
236.9 |
O2 |
S1 |
C1 |
S2 |
246.0 |
67.4 |
C1 |
S1 |
O2 |
N1 |
242.0 |
113.7 |
C1 |
S1 |
O2 |
O1 |
117.2 |
236.9 |
O2 |
S1 |
N1 |
HN11 |
58.4 |
292.5 |
O2 |
S1 |
N1 |
HN12 |
293.1 |
112.7 |
N1 |
S1 |
O2 |
O1 |
235.2 |
123.1 |