PDB Chemical Component AY7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AY7
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
F30 |
C28 |
1.349 |
1.399 |
CL |
C28 |
1.808 |
1.803 |
F29 |
C28 |
1.363 |
1.399 |
C28 |
O22 |
1.440 |
1.429 |
O22 |
C19 |
1.402 |
1.360 |
C19 |
C18 |
1.415 |
1.387 |
C19 |
C20 |
1.412 |
1.388 |
C18 |
C17 |
1.399 |
1.381 |
C20 |
C21 |
1.404 |
1.380 |
C17 |
C16 |
1.417 |
1.389 |
C21 |
C16 |
1.412 |
1.389 |
C16 |
N14 |
1.424 |
1.400 |
C26 |
C27 |
1.473 |
1.395 |
C26 |
N25 |
1.277 |
1.309 |
C27 |
C12 |
1.342 |
1.367 |
N14 |
C13 |
1.367 |
1.348 |
O15 |
C13 |
1.227 |
1.216 |
C13 |
C9 |
1.505 |
1.475 |
N25 |
N24 |
1.352 |
1.400 |
C10 |
C9 |
1.408 |
1.401 |
C10 |
C11 |
1.395 |
1.392 |
C12 |
N24 |
1.310 |
1.363 |
C12 |
C11 |
1.507 |
1.479 |
C9 |
C8 |
1.408 |
1.397 |
C11 |
C1 |
1.418 |
1.405 |
C8 |
N7 |
1.354 |
1.316 |
C1 |
N7 |
1.367 |
1.324 |
C1 |
N2 |
1.358 |
1.383 |
C3 |
N2 |
1.445 |
1.478 |
C3 |
C4 |
1.547 |
1.549 |
N2 |
C6 |
1.463 |
1.474 |
C6 |
C5 |
1.550 |
1.543 |
C4 |
O23 |
1.440 |
1.430 |
C4 |
C5 |
1.553 |
1.552 |
C3 |
H1 |
1.100 |
1.090 |
C3 |
H2 |
1.100 |
1.090 |
C17 |
H3 |
1.080 |
1.080 |
C18 |
H4 |
1.080 |
1.080 |
C20 |
H5 |
1.080 |
1.080 |
C21 |
H6 |
1.080 |
1.080 |
C26 |
H7 |
1.080 |
1.080 |
C27 |
H8 |
1.080 |
1.080 |
C4 |
H9 |
1.100 |
1.090 |
C5 |
H10 |
1.100 |
1.090 |
C5 |
H11 |
1.100 |
1.090 |
C6 |
H12 |
1.100 |
1.090 |
C6 |
H13 |
1.100 |
1.090 |
C8 |
H14 |
1.079 |
1.080 |
C10 |
H15 |
1.080 |
1.080 |
N14 |
H16 |
1.000 |
0.970 |
O23 |
H17 |
0.949 |
0.968 |
N24 |
H18 |
1.000 |
0.970 |
Bond Angles for AY7
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C19 |
C18 |
H4 |
119.8 |
120.0 |
C19 |
C20 |
C21 |
119.0 |
120.0 |
C19 |
C20 |
H5 |
120.5 |
120.0 |
C18 |
C17 |
H3 |
119.9 |
120.0 |
C21 |
C20 |
H5 |
120.5 |
120.0 |
C20 |
C21 |
H6 |
119.3 |
120.0 |
C17 |
C16 |
N14 |
122.0 |
120.0 |
C21 |
C16 |
N14 |
118.4 |
120.0 |
C16 |
N14 |
H16 |
115.5 |
120.0 |
C27 |
C26 |
N25 |
106.3 |
108.6 |
C27 |
C26 |
H7 |
126.8 |
125.8 |
C26 |
C27 |
H8 |
127.9 |
126.0 |
C26 |
N25 |
N24 |
110.6 |
108.5 |
N25 |
C26 |
H7 |
126.9 |
125.7 |
C27 |
C12 |
N24 |
110.0 |
107.3 |
C13 |
C9 |
C8 |
124.7 |
120.4 |
N25 |
N24 |
H18 |
125.7 |
126.2 |
C12 |
N24 |
H18 |
125.6 |
126.1 |
C9 |
C8 |
H14 |
120.1 |
119.5 |
C11 |
C1 |
N7 |
119.8 |
120.7 |
C11 |
C1 |
N2 |
123.2 |
119.7 |
N2 |
C1 |
N7 |
116.9 |
119.6 |
C1 |
N2 |
C3 |
123.1 |
111.0 |
C1 |
N2 |
C6 |
123.3 |
111.0 |
N2 |
C3 |
C4 |
98.3 |
104.8 |
C3 |
N2 |
C6 |
113.6 |
108.6 |
N2 |
C3 |
H1 |
112.2 |
110.3 |
N2 |
C3 |
H2 |
112.2 |
110.4 |
C3 |
C4 |
O23 |
110.1 |
111.0 |
C3 |
C4 |
C5 |
104.4 |
101.6 |
C4 |
C3 |
H1 |
112.2 |
110.4 |
C4 |
C3 |
H2 |
112.2 |
110.4 |
C3 |
C4 |
H9 |
108.9 |
111.0 |
N2 |
C6 |
C5 |
101.8 |
107.2 |
N2 |
C6 |
H12 |
111.3 |
109.9 |
N2 |
C6 |
H13 |
111.3 |
109.9 |
C6 |
C5 |
H10 |
110.5 |
110.7 |
C6 |
C5 |
H11 |
110.5 |
110.9 |
C5 |
C4 |
O23 |
113.9 |
111.0 |
O23 |
C4 |
H9 |
110.4 |
110.9 |
C4 |
O23 |
H17 |
109.5 |
114.0 |
C5 |
C4 |
H9 |
108.9 |
111.0 |
C4 |
C5 |
H10 |
110.5 |
110.7 |
C4 |
C5 |
H11 |
110.5 |
110.7 |
H1 |
C3 |
H2 |
109.5 |
110.4 |
H10 |
C5 |
H11 |
109.4 |
110.6 |
H12 |
C6 |
H13 |
109.5 |
110.0 |
Torsion Angles for AY7
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O22 |
C19 |
C18 |
H4 |
2.3 |
0.0 |
O22 |
C19 |
C20 |
H5 |
358.2 |
0.1 |
C19 |
C18 |
C17 |
H3 |
176.3 |
180.1 |
C20 |
C19 |
C18 |
H4 |
180.9 |
180.1 |
C21 |
C20 |
C19 |
H5 |
180.0 |
179.7 |
C19 |
C20 |
C21 |
H6 |
182.7 |
180.0 |
C18 |
C17 |
C16 |
N14 |
174.9 |
180.0 |
C19 |
C20 |
C21 |
H5 |
180.0 |
180.3 |
C20 |
C21 |
C16 |
N14 |
185.1 |
179.7 |
C21 |
C16 |
C17 |
N14 |
190.9 |
180.2 |
C17 |
C16 |
N14 |
H16 |
196.7 |
206.8 |
C17 |
C16 |
C21 |
N14 |
169.4 |
179.8 |
C21 |
C16 |
N14 |
H16 |
5.8 |
26.6 |
C27 |
C26 |
N25 |
N24 |
357.4 |
359.6 |
N25 |
C26 |
C27 |
H7 |
180.0 |
180.3 |
C26 |
C27 |
C12 |
N24 |
1.1 |
360.0 |
C27 |
C26 |
N25 |
H7 |
180.0 |
179.7 |
N25 |
C26 |
C27 |
H8 |
180.9 |
180.3 |
C26 |
N25 |
N24 |
H18 |
183.4 |
180.5 |
C27 |
C12 |
N24 |
H18 |
177.3 |
179.7 |
C13 |
C9 |
C8 |
H14 |
358.8 |
360.0 |
N24 |
N25 |
C26 |
H7 |
177.4 |
179.8 |
C12 |
N24 |
N25 |
H18 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
H14 |
179.0 |
179.5 |
C26 |
N25 |
N24 |
C12 |
3.4 |
0.4 |
N25 |
N24 |
C12 |
H18 |
180.0 |
180.1 |
C12 |
C11 |
C1 |
N7 |
179.6 |
180.0 |
C12 |
C11 |
C1 |
N2 |
355.1 |
0.3 |
N2 |
C1 |
C11 |
N7 |
175.5 |
180.2 |
C11 |
C1 |
N2 |
C3 |
111.7 |
205.3 |
C11 |
C1 |
N2 |
C6 |
289.4 |
84.4 |
C13 |
C9 |
C8 |
N7 |
178.8 |
180.0 |
C11 |
C1 |
N7 |
N2 |
175.8 |
180.2 |
N7 |
C1 |
N2 |
C3 |
287.4 |
25.6 |
N7 |
C1 |
N2 |
C6 |
105.1 |
264.6 |
C11 |
C1 |
N2 |
N7 |
184.3 |
179.8 |
C1 |
N2 |
C3 |
C4 |
137.5 |
213.6 |
C3 |
N2 |
C1 |
C6 |
182.3 |
120.9 |
C1 |
N2 |
C3 |
H1 |
255.6 |
332.4 |
C1 |
N2 |
C3 |
H2 |
19.3 |
94.8 |
C1 |
N2 |
C6 |
C5 |
207.8 |
123.3 |
C1 |
N2 |
C6 |
H12 |
326.6 |
242.7 |
C1 |
N2 |
C6 |
H13 |
89.1 |
3.9 |
C3 |
N2 |
C1 |
N7 |
287.4 |
25.6 |
C1 |
N2 |
C3 |
C6 |
177.9 |
237.7 |
N2 |
C3 |
C4 |
O23 |
159.9 |
155.1 |
N2 |
C3 |
C4 |
C5 |
37.3 |
37.1 |
C4 |
C3 |
N2 |
H1 |
241.9 |
241.2 |
C4 |
C3 |
N2 |
H2 |
118.1 |
118.9 |
N2 |
C3 |
C4 |
H9 |
281.1 |
278.9 |
C3 |
N2 |
C6 |
C5 |
25.7 |
0.9 |
C3 |
N2 |
C6 |
H12 |
144.5 |
120.3 |
C3 |
N2 |
C6 |
H13 |
267.0 |
241.6 |
H1 |
C3 |
N2 |
H2 |
236.3 |
237.7 |
C4 |
C3 |
N2 |
C6 |
319.6 |
335.9 |
N2 |
C3 |
C4 |
H1 |
118.1 |
118.8 |
N2 |
C3 |
C4 |
H2 |
241.8 |
241.1 |
C5 |
C4 |
C3 |
O23 |
237.3 |
242.0 |
O23 |
C4 |
C3 |
H9 |
238.8 |
236.2 |
C3 |
C4 |
O23 |
H17 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H9 |
116.2 |
118.1 |
C3 |
C4 |
C5 |
H10 |
216.4 |
82.7 |
C3 |
C4 |
C5 |
H11 |
95.1 |
205.8 |
H1 |
C3 |
C4 |
H2 |
123.7 |
122.3 |
C6 |
N2 |
C1 |
N7 |
105.1 |
264.6 |
C1 |
N2 |
C6 |
C3 |
182.1 |
122.3 |
C6 |
N2 |
C3 |
C4 |
319.6 |
335.9 |
C6 |
N2 |
C3 |
H1 |
77.7 |
94.7 |
C6 |
N2 |
C3 |
H2 |
201.5 |
217.1 |
N2 |
C6 |
C5 |
H10 |
120.4 |
263.9 |
N2 |
C6 |
C5 |
H11 |
241.7 |
140.8 |
H12 |
C6 |
N2 |
H13 |
237.5 |
238.8 |
N2 |
C6 |
C5 |
H12 |
118.7 |
119.4 |
N2 |
C6 |
C5 |
H13 |
241.2 |
240.6 |
C6 |
C5 |
C4 |
O23 |
215.6 |
206.3 |
C6 |
C5 |
C4 |
H9 |
91.9 |
82.5 |
C4 |
C5 |
C6 |
H10 |
240.6 |
118.4 |
C4 |
C5 |
C6 |
H11 |
119.4 |
241.6 |
H10 |
C5 |
C6 |
H11 |
238.7 |
123.2 |
C3 |
C4 |
O23 |
C5 |
243.1 |
247.8 |
O23 |
C4 |
C3 |
H1 |
41.8 |
36.3 |
O23 |
C4 |
C3 |
H2 |
278.1 |
274.0 |
C3 |
C4 |
O23 |
H9 |
120.3 |
123.9 |
C5 |
C4 |
O23 |
H9 |
237.2 |
236.1 |
O23 |
C4 |
C5 |
H10 |
96.3 |
324.7 |
O23 |
C4 |
C5 |
H11 |
335.0 |
87.7 |
C3 |
C4 |
C5 |
O23 |
120.1 |
118.1 |
C5 |
C4 |
C3 |
H1 |
279.1 |
278.3 |
C5 |
C4 |
C3 |
H2 |
155.4 |
155.9 |
C3 |
C4 |
C5 |
H9 |
243.8 |
241.9 |
N2 |
C6 |
C5 |
C4 |
1.1 |
22.3 |
C6 |
C5 |
C4 |
H10 |
119.4 |
241.6 |
C6 |
C5 |
C4 |
H11 |
240.6 |
118.6 |
O23 |
C4 |
C5 |
H9 |
123.7 |
123.8 |
C5 |
C4 |
O23 |
H17 |
296.9 |
292.2 |
H10 |
C5 |
C4 |
H11 |
121.3 |
237.0 |
N2 |
C3 |
H1 |
C4 |
250.5 |
244.6 |
H1 |
C3 |
N2 |
C6 |
77.7 |
94.7 |
N2 |
C3 |
H1 |
H2 |
125.2 |
122.3 |
H1 |
C3 |
C4 |
O23 |
41.8 |
36.3 |
H1 |
C3 |
C4 |
C5 |
279.1 |
278.3 |
C4 |
C3 |
H1 |
H2 |
234.8 |
237.7 |
H1 |
C3 |
C4 |
H9 |
162.9 |
160.1 |
N2 |
C3 |
H2 |
C4 |
109.5 |
115.4 |
H2 |
C3 |
N2 |
C6 |
201.5 |
217.1 |
N2 |
C3 |
H2 |
H1 |
234.8 |
237.7 |
H2 |
C3 |
C4 |
O23 |
278.1 |
274.0 |
H2 |
C3 |
C4 |
C5 |
155.4 |
155.9 |
C4 |
C3 |
H2 |
H1 |
125.2 |
122.3 |
H2 |
C3 |
C4 |
H9 |
39.2 |
37.8 |
H3 |
C17 |
C16 |
N14 |
354.9 |
360.0 |
H4 |
C18 |
C17 |
H3 |
356.3 |
0.0 |
C19 |
C20 |
H5 |
C21 |
180.0 |
179.7 |
H5 |
C20 |
C21 |
H6 |
2.7 |
359.7 |
H6 |
C21 |
C20 |
H5 |
2.7 |
359.7 |
H6 |
C21 |
C16 |
N14 |
5.1 |
0.3 |
C27 |
C26 |
H7 |
N25 |
180.0 |
180.3 |
H7 |
C26 |
C27 |
H8 |
0.9 |
0.0 |
H7 |
C26 |
N25 |
N24 |
177.4 |
179.8 |
H8 |
C27 |
C26 |
N25 |
180.9 |
180.3 |
H8 |
C27 |
C26 |
H7 |
0.9 |
0.0 |
H8 |
C27 |
C12 |
N24 |
181.1 |
180.0 |
C3 |
C4 |
H9 |
O23 |
239.0 |
236.1 |
C3 |
C4 |
H9 |
C5 |
113.3 |
112.3 |
H9 |
C4 |
C3 |
H1 |
162.9 |
160.1 |
H9 |
C4 |
C3 |
H2 |
39.2 |
37.8 |
C5 |
C4 |
H9 |
O23 |
125.7 |
123.8 |
H9 |
C4 |
O23 |
H17 |
59.7 |
56.1 |
H9 |
C4 |
C5 |
H10 |
332.6 |
200.9 |
H9 |
C4 |
C5 |
H11 |
211.3 |
323.9 |
C6 |
C5 |
H10 |
H11 |
121.9 |
236.7 |
H10 |
C5 |
C4 |
O23 |
96.3 |
324.7 |
H10 |
C5 |
C4 |
H9 |
332.6 |
200.9 |
C4 |
C5 |
H10 |
H11 |
238.1 |
123.1 |
C6 |
C5 |
H11 |
H10 |
238.1 |
123.2 |
H11 |
C5 |
C4 |
O23 |
335.0 |
87.7 |
H11 |
C5 |
C4 |
H9 |
211.3 |
323.9 |
C4 |
C5 |
H11 |
H10 |
121.9 |
236.9 |
N2 |
C6 |
H12 |
C5 |
247.1 |
242.3 |
N2 |
C6 |
H12 |
H13 |
123.5 |
121.2 |
H12 |
C6 |
C5 |
H10 |
1.7 |
144.5 |
H12 |
C6 |
C5 |
H11 |
122.9 |
21.3 |
N2 |
C6 |
H13 |
C5 |
112.9 |
117.7 |
N2 |
C6 |
H13 |
H12 |
236.5 |
238.8 |
H13 |
C6 |
C5 |
H10 |
239.2 |
23.3 |
H13 |
C6 |
C5 |
H11 |
0.4 |
260.1 |
H17 |
O23 |
C4 |
H9 |
59.7 |
56.1 |