PDB Chemical Component AXY
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AXY
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAH |
CAD |
1.388 |
1.384 |
| CAH |
CAN |
1.390 |
1.380 |
| CAD |
CAG |
1.392 |
1.383 |
| CAN |
CBA |
1.394 |
1.394 |
| CAG |
CAM |
1.390 |
1.381 |
| CBA |
CAM |
1.389 |
1.393 |
| CBA |
CBC |
1.387 |
1.483 |
| CBC |
CAT |
1.390 |
1.393 |
| CBC |
CAS |
1.393 |
1.394 |
| CAT |
CAP |
1.389 |
1.379 |
| CAS |
CAO |
1.390 |
1.380 |
| CAP |
CAY |
1.395 |
1.388 |
| CAO |
CAY |
1.387 |
1.389 |
| CAY |
OAV |
1.362 |
1.358 |
| CBD |
OAV |
1.431 |
1.428 |
| CBD |
CAW |
1.532 |
1.507 |
| CBD |
CAU |
1.530 |
1.530 |
| OAB |
CAW |
1.250 |
1.208 |
| CAW |
OAA |
1.248 |
1.343 |
| CAU |
CAX |
1.390 |
1.508 |
| CAX |
CAI |
1.391 |
1.383 |
| CAX |
CAJ |
1.391 |
1.382 |
| CAI |
CAQ |
1.391 |
1.380 |
| CAJ |
CAR |
1.390 |
1.380 |
| CAQ |
CBB |
1.391 |
1.394 |
| CAR |
CBB |
1.390 |
1.393 |
| CBB |
CAZ |
1.392 |
1.484 |
| CAZ |
CAK |
1.392 |
1.393 |
| CAZ |
CAL |
1.390 |
1.394 |
| CAK |
CAE |
1.390 |
1.380 |
| CAL |
CAF |
1.389 |
1.379 |
| CAE |
CAC |
1.390 |
1.383 |
| CAF |
CAC |
1.392 |
1.384 |
| CAK |
H1 |
1.080 |
1.080 |
| CAE |
H2 |
1.080 |
1.080 |
| CAC |
H3 |
1.080 |
1.080 |
| CAF |
H4 |
1.080 |
1.080 |
| CAL |
H5 |
1.080 |
1.080 |
| CAR |
H6 |
1.080 |
1.080 |
| CAJ |
H7 |
1.080 |
1.080 |
| CAQ |
H8 |
1.079 |
1.080 |
| CAI |
H9 |
1.080 |
1.080 |
| CAU |
H10 |
1.099 |
1.089 |
| CAU |
H11 |
1.100 |
1.090 |
| CBD |
H12 |
1.100 |
1.090 |
| OAA |
H13 |
0.950 |
0.967 |
| CAP |
H14 |
1.080 |
1.080 |
| CAT |
H15 |
1.080 |
1.080 |
| CAO |
H16 |
1.080 |
1.080 |
| CAS |
H17 |
1.080 |
1.080 |
| CAM |
H18 |
1.080 |
1.081 |
| CAG |
H19 |
1.079 |
1.080 |
| CAD |
H20 |
1.080 |
1.081 |
| CAH |
H21 |
1.081 |
1.080 |
| CAN |
H22 |
1.080 |
1.080 |
Bond Angles for AXY
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAH |
CAD |
H20 |
119.9 |
119.9 |
| CAN |
CAH |
H21 |
120.2 |
120.0 |
| CAH |
CAN |
H22 |
119.8 |
120.1 |
| CAD |
CAG |
H19 |
120.0 |
120.0 |
| CAG |
CAM |
H18 |
120.0 |
120.0 |
| CBA |
CAM |
H18 |
120.0 |
120.1 |
| CBC |
CAT |
H15 |
119.9 |
120.0 |
| CBC |
CAS |
H17 |
119.9 |
120.1 |
| CAT |
CAP |
H14 |
119.8 |
119.9 |
| CAS |
CAO |
H16 |
119.8 |
119.9 |
| CAW |
CBD |
OAV |
111.7 |
109.4 |
| OAV |
CBD |
H12 |
109.6 |
109.5 |
| CBD |
CAW |
OAA |
117.0 |
120.0 |
| CAW |
CBD |
H12 |
108.3 |
109.4 |
| CBD |
CAU |
H10 |
109.1 |
109.5 |
| CBD |
CAU |
H11 |
109.1 |
109.5 |
| OAB |
CAW |
OAA |
126.2 |
120.0 |
| CAW |
OAA |
H13 |
109.5 |
117.0 |
| CAX |
CAI |
H9 |
120.0 |
120.0 |
| CAX |
CAJ |
H7 |
120.0 |
120.0 |
| CAI |
CAQ |
H8 |
119.9 |
120.1 |
| CAJ |
CAR |
H6 |
119.9 |
120.1 |
| CAZ |
CAK |
H1 |
119.9 |
120.1 |
| CAZ |
CAL |
H5 |
119.9 |
120.0 |
| CAK |
CAE |
CAC |
119.9 |
120.2 |
| CAE |
CAK |
H1 |
119.9 |
120.1 |
| CAK |
CAE |
H2 |
120.1 |
119.9 |
| CAL |
CAF |
H4 |
120.0 |
119.9 |
| CAC |
CAE |
H2 |
120.1 |
119.9 |
| CAE |
CAC |
H3 |
120.0 |
119.9 |
| CAF |
CAC |
H3 |
120.0 |
119.9 |
| H10 |
CAU |
H11 |
109.5 |
109.5 |
Torsion Angles for AXY
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAH |
CAD |
CAG |
H19 |
179.1 |
180.0 |
| CAN |
CAH |
CAD |
H20 |
180.2 |
179.7 |
| CAD |
CAG |
CAM |
H18 |
181.3 |
180.0 |
| CAN |
CBA |
CAM |
H18 |
178.9 |
180.2 |
| CBA |
CAM |
CAG |
H18 |
180.0 |
180.0 |
| CAG |
CAM |
CBA |
H18 |
180.0 |
180.0 |
| CBA |
CBC |
CAT |
H15 |
2.8 |
0.0 |
| CBA |
CBC |
CAS |
H17 |
354.6 |
0.1 |
| CBC |
CAT |
CAP |
H14 |
182.5 |
180.0 |
| CAS |
CBC |
CAT |
H15 |
180.3 |
179.8 |
| CBC |
CAS |
CAO |
H16 |
182.7 |
180.1 |
| CAY |
OAV |
CBD |
H12 |
54.6 |
35.4 |
| OAV |
CBD |
CAW |
OAA |
322.7 |
180.0 |
| CAW |
CBD |
OAV |
H12 |
240.0 |
240.1 |
| OAV |
CBD |
CAU |
H10 |
179.2 |
175.0 |
| OAV |
CBD |
CAU |
H11 |
298.8 |
55.0 |
| OAV |
CBD |
CAW |
H12 |
120.8 |
120.0 |
| CAW |
CBD |
CAU |
H10 |
56.5 |
55.0 |
| CAW |
CBD |
CAU |
H11 |
176.1 |
294.9 |
| OAB |
CAW |
CBD |
OAA |
174.0 |
180.0 |
| CBD |
CAW |
OAA |
H13 |
173.3 |
179.9 |
| H10 |
CAU |
CBD |
H11 |
240.4 |
120.0 |
| OAB |
CAW |
CBD |
OAV |
136.7 |
359.9 |
| CBD |
CAW |
OAB |
OAA |
186.7 |
180.0 |
| OAB |
CAW |
CBD |
H12 |
15.9 |
240.0 |
| OAB |
CAW |
OAA |
H13 |
0.0 |
360.0 |
| OAA |
CAW |
CBD |
OAV |
322.7 |
180.0 |
| OAA |
CAW |
CBD |
H12 |
201.9 |
60.0 |
| CAU |
CAX |
CAI |
H9 |
4.0 |
360.0 |
| CAU |
CAX |
CAJ |
H7 |
356.6 |
360.0 |
| CAI |
CAX |
CAJ |
H7 |
179.5 |
179.7 |
| CAX |
CAI |
CAQ |
H8 |
178.0 |
180.0 |
| CAX |
CAJ |
CAR |
H6 |
180.8 |
180.0 |
| CBB |
CAZ |
CAK |
H1 |
355.0 |
0.3 |
| CBB |
CAZ |
CAL |
H5 |
4.4 |
359.7 |
| CAE |
CAK |
CAZ |
H1 |
180.0 |
179.7 |
| CAZ |
CAK |
CAE |
H2 |
181.7 |
180.3 |
| CAL |
CAZ |
CAK |
H1 |
176.7 |
179.7 |
| CAZ |
CAL |
CAF |
H4 |
179.6 |
179.8 |
| CAZ |
CAK |
CAE |
H1 |
180.0 |
180.3 |
| CAC |
CAE |
CAK |
H2 |
180.0 |
180.0 |
| CAK |
CAE |
CAC |
H3 |
180.6 |
180.0 |
| CAL |
CAF |
CAC |
H3 |
178.7 |
180.0 |
| CAC |
CAE |
CAK |
H1 |
181.7 |
180.0 |
| CAK |
CAE |
CAC |
H2 |
180.0 |
180.0 |
| CAF |
CAC |
CAE |
H3 |
180.0 |
180.0 |
| CAF |
CAC |
CAE |
H2 |
180.6 |
180.0 |
| CAE |
CAC |
CAF |
H3 |
180.0 |
180.0 |
| H1 |
CAK |
CAE |
CAC |
181.7 |
180.0 |
| H1 |
CAK |
CAE |
H2 |
1.7 |
360.0 |
| CAK |
CAE |
H2 |
CAC |
180.0 |
180.0 |
| H2 |
CAE |
CAK |
H1 |
1.7 |
360.0 |
| H2 |
CAE |
CAC |
H3 |
0.6 |
0.0 |
| H3 |
CAC |
CAE |
H2 |
0.6 |
0.0 |
| H4 |
CAF |
CAC |
H3 |
358.8 |
359.9 |
| H5 |
CAL |
CAF |
H4 |
359.6 |
0.0 |
| H7 |
CAJ |
CAR |
H6 |
0.7 |
0.0 |
| H9 |
CAI |
CAQ |
H8 |
358.0 |
0.1 |
| CBD |
CAU |
H10 |
H11 |
119.4 |
240.0 |
| CBD |
CAU |
H11 |
H10 |
240.6 |
120.1 |
| CAW |
CBD |
H12 |
OAV |
122.0 |
119.9 |
| H12 |
CBD |
CAW |
OAA |
201.9 |
60.0 |
| H12 |
CBD |
CAU |
H10 |
298.6 |
295.0 |
| H12 |
CBD |
CAU |
H11 |
58.2 |
175.0 |
| H15 |
CAT |
CAP |
H14 |
2.5 |
0.0 |
| H17 |
CAS |
CAO |
H16 |
2.8 |
0.0 |
| H19 |
CAG |
CAM |
H18 |
1.3 |
360.0 |
| H20 |
CAD |
CAG |
H19 |
359.2 |
0.0 |
| H21 |
CAH |
CAD |
H20 |
0.2 |
360.0 |
| H21 |
CAH |
CAN |
H22 |
0.1 |
359.8 |
| H22 |
CAN |
CAH |
H21 |
0.1 |
359.8 |