PDB Chemical Component AXI

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AXI

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O81	C80	1.246	1.216
C80	N82	1.346	1.348
C80	C23	1.488	1.474
N82	C88	1.461	1.465
C23	C22	1.426	1.398
C23	C18	1.436	1.405
C22	C21	1.417	1.377
C21	C20	1.411	1.387
C20	C19	1.416	1.379
C18	C19	1.434	1.389
C18	S24	1.750	1.761
S24	C07	1.741	1.762
C07	C08	1.422	1.402
C07	C12	1.430	1.365
C08	C09	1.437	1.358
C09	C10	1.431	1.404
C12	C11	1.393	1.411
C11	N15	1.386	1.324
C11	C10	1.386	1.468
N15	N14	1.290	1.399
N14	C13	1.283	1.359
C13	C10	1.451	1.402
C13	C16	1.472	1.419
C16	C17	1.395	1.351
C17	C02	1.502	1.470
C02	N03	1.350	1.331
C02	C01	1.416	1.399
N03	C04	1.363	1.317
C04	C05	1.406	1.383
C05	C06	1.406	1.389
C06	C01	1.419	1.381
N82	H82	1.000	0.970
C88	H881	1.100	1.090
C88	H882	1.100	1.090
C88	H883	1.100	1.090
C22	H22	1.080	1.080
C21	H21	1.080	1.079
C20	H20	1.080	1.080
C19	H19	1.080	1.081
C08	H08	1.080	1.080
C12	H12	1.080	1.080
C09	H09	1.080	1.080
N14	H14	1.000	0.970
C16	H16	1.080	1.080
C17	H17	1.080	1.080
C01	H01	1.081	1.081
C04	H04	1.079	1.079
C05	H05	1.080	1.080
C06	H06	1.080	1.081

Bond Angles for AXI

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O81	C80	N82	120.6	120.0
O81	C80	C23	119.0	120.0
N82	C80	C23	120.3	120.0
C80	N82	C88	124.1	120.0
C80	N82	H82	118.0	120.0
C80	C23	C22	116.6	120.2
C80	C23	C18	124.5	120.2
C88	N82	H82	118.0	120.0
N82	C88	H881	109.5	109.4
N82	C88	H882	109.4	109.4
N82	C88	H883	109.5	109.4
C22	C23	C18	119.0	119.6
C23	C22	C21	122.7	120.0
C23	C22	H22	118.7	120.0
C23	C18	C19	117.8	119.6
C23	C18	S24	123.7	120.1
C22	C21	C20	118.2	120.3
C21	C22	H22	118.6	120.0
C22	C21	H21	120.9	119.8
C21	C20	C19	120.3	120.4
C20	C21	H21	120.9	119.8
C21	C20	H20	119.9	119.7
C20	C19	C18	122.0	120.1
C19	C20	H20	119.8	119.8
C20	C19	H19	119.0	119.9
C19	C18	S24	118.4	120.2
C18	C19	H19	119.0	120.0
C18	S24	C07	108.1	103.0
S24	C07	C08	120.2	119.2
S24	C07	C12	120.1	119.2
C08	C07	C12	119.6	121.6
C07	C08	C09	121.3	121.5
C07	C08	H08	119.3	119.2
C07	C12	C11	118.9	119.5
C07	C12	H12	120.5	120.3
C08	C09	C10	116.6	119.7
C09	C08	H08	119.4	119.2
C08	C09	H09	121.7	120.1
C09	C10	C11	121.7	119.1
C09	C10	C13	135.7	134.6
C10	C09	H09	121.7	120.2
C12	C11	N15	130.4	134.2
C12	C11	C10	121.9	118.6
C11	C12	H12	120.6	120.2
N15	C11	C10	107.7	107.2
C11	N15	N14	109.1	109.4
C11	C10	C13	102.6	106.3
N15	N14	C13	111.4	109.7
N15	N14	H14	124.3	125.1
N14	C13	C10	109.2	107.4
N14	C13	C16	121.1	126.3
C13	N14	H14	124.3	125.2
C10	C13	C16	129.6	126.3
C13	C16	C17	128.1	120.0
C13	C16	H16	115.9	120.0
C16	C17	C02	123.5	120.0
C17	C16	H16	116.0	120.0
C16	C17	H17	118.3	120.0
C17	C02	N03	115.1	119.8
C17	C02	C01	122.7	119.8
C02	C17	H17	118.3	120.0
N03	C02	C01	122.1	120.4
C02	N03	C04	120.6	121.5
C02	C01	C06	117.5	119.0
C02	C01	H01	121.2	120.5
N03	C04	C05	120.9	120.9
N03	C04	H04	119.5	119.5
C04	C05	C06	119.1	119.5
C05	C04	H04	119.5	119.6
C04	C05	H05	120.4	120.2
C05	C06	C01	119.8	118.6
C06	C05	H05	120.4	120.3
C05	C06	H06	120.1	120.7
C06	C01	H01	121.3	120.5
C01	C06	H06	120.1	120.8
H881	C88	H882	109.5	109.5
H881	C88	H883	109.5	109.5
H882	C88	H883	109.5	109.5

Torsion Angles for AXI

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N82	C80	O81	C23	181.4	180.4
O81	C80	N82	C88	5.1	359.9
O81	C80	N82	H82	185.2	180.0
O81	C80	C23	C22	218.6	180.0
O81	C80	C23	C18	37.6	359.7
O81	C80	N82	C23	178.6	179.6
N82	C80	C23	C22	37.2	359.7
N82	C80	C23	C18	216.2	179.4
C88	N82	C80	H82	180.0	179.9
C80	N82	C88	H881	180.0	60.0
C80	N82	C88	H882	300.0	180.0
C80	N82	C88	H883	60.0	300.0
O81	C80	C23	N82	181.3	180.4
C23	C80	N82	C88	186.5	180.3
C23	C80	N82	H82	6.5	0.3
C22	C23	C80	C18	181.0	180.3
C80	C23	C22	C21	179.8	180.0
C80	C23	C22	H22	359.8	0.0
C80	C23	C18	C19	179.9	179.6
C80	C23	C18	S24	1.9	0.0
C88	N82	C80	C23	186.5	180.3
C80	N82	C88	H82	180.0	180.1
H881	C88	N82	H882	240.0	240.0
H881	C88	N82	H883	120.0	120.0
H882	C88	N82	H883	240.0	240.0
C80	C23	C22	C18	179.1	179.7
C22	C23	C18	C19	358.9	359.3
C22	C23	C18	S24	180.9	179.7
C23	C22	C21	C20	359.3	0.0
C21	C22	C23	H22	180.0	180.0
C23	C22	C21	H21	179.2	180.0
C80	C23	C18	C22	181.0	180.3
C18	C23	C22	C21	0.7	0.3
C18	C23	C22	H22	180.7	180.3
C20	C19	C18	C23	1.7	0.7
C19	C18	C23	S24	178.0	179.6
C23	C18	C19	H19	181.7	180.4
C23	C18	S24	C07	214.0	174.2
C21	C22	C23	C18	0.7	0.3
C23	C22	C21	H22	180.0	180.0
C22	C21	C20	C19	1.2	0.0
C20	C21	C22	H21	180.0	180.0
C22	C21	C20	H20	181.3	179.9
C20	C21	C22	H22	179.3	180.0
C22	C21	C20	H21	180.0	180.0
C21	C20	C19	C18	358.3	359.6
C19	C20	C21	H20	180.0	180.1
C21	C20	C19	H19	178.2	179.9
C23	C18	C19	C20	1.7	0.7
C19	C20	C21	H21	181.2	180.0
C21	C20	C19	H20	180.0	179.9
C20	C19	C18	S24	179.7	180.3
C18	C19	C20	H19	180.0	179.7
C23	C18	C19	S24	181.9	180.4
C18	C19	C20	H20	178.2	179.7
C20	C19	C18	H19	180.0	180.3
C19	C18	S24	C07	36.1	354.6
C23	C18	S24	C19	178.0	179.6
S24	C18	C19	H19	359.8	0.0
C18	S24	C07	C08	226.1	94.8
C18	S24	C07	C12	46.0	274.6
C08	C07	S24	C12	180.0	180.2
S24	C07	C08	C09	180.6	180.0
S24	C07	C08	H08	0.6	0.0
S24	C07	C12	C11	179.8	180.0
S24	C07	C12	H12	359.7	359.9
S24	C07	C08	C12	180.0	179.8
C08	C07	C12	C11	359.7	359.8
C08	C07	C12	H12	179.7	179.7
C07	C08	C09	C10	359.3	0.1
C09	C08	C07	H08	180.0	179.9
C07	C08	C09	H09	179.2	179.9
S24	C07	C12	C08	180.0	180.2
C12	C07	C08	C09	0.7	0.2
C12	C07	C08	H08	180.7	180.2
C07	C12	C11	N15	180.8	180.0
C07	C12	C11	C10	360.0	359.9
C11	C12	C07	H12	180.0	180.1
C09	C08	C07	C12	0.7	0.2
C07	C08	C09	H08	180.0	180.1
C08	C09	C10	C11	0.5	359.7
C08	C09	C10	C13	178.4	180.1
C10	C09	C08	H09	180.0	180.1
C10	C09	C08	H08	179.3	180.0
C08	C09	C10	H09	180.0	179.9
C12	C11	C10	C09	359.9	0.3
N15	C11	C10	C09	179.3	180.3
C11	C10	C09	C13	182.0	179.6
N14	C13	C10	C09	181.9	179.7
C09	C10	C13	C16	359.3	359.7
C07	C12	C11	H12	180.0	179.9
C09	C10	C11	C12	359.9	0.3
N15	C11	C12	C10	180.8	180.0
C12	C11	N15	N14	177.9	180.0
C12	C11	C10	C13	181.4	180.0
C09	C10	C11	N15	179.3	180.3
C12	C11	N15	C10	179.2	180.0
N15	C11	C12	H12	0.8	0.1
N15	C11	C10	C13	0.7	360.0
C11	N15	N14	C13	1.5	360.0
C11	N15	N14	H14	181.6	180.0
C09	C10	C11	C13	178.5	180.3
C11	C10	C09	H09	180.5	179.8
C12	C11	C10	N15	180.7	180.0
C10	C11	C12	H12	180.0	180.0
C10	C11	N15	N14	358.6	0.0
N14	C13	C10	C11	0.2	360.0
C11	C10	C13	C16	177.5	180.1
N14	N15	C11	C10	358.6	0.0
N15	N14	C13	C10	358.9	0.0
N15	N14	C13	C16	181.3	180.0
C13	N14	N15	H14	180.0	180.0
C09	C10	C13	N14	181.9	179.7
C11	C10	C13	N14	0.2	360.0
N15	N14	C13	H14	180.0	180.0
C10	C13	N14	C16	177.6	180.1
N14	C13	C16	C17	183.8	0.1
N14	C13	C16	H16	3.8	180.0
C09	C10	C13	C11	181.8	179.7
C13	C10	C09	H09	358.4	0.2
N14	C13	C10	C16	182.7	179.9
C10	C13	N14	H14	178.9	180.0
C10	C13	C16	C17	6.7	180.0
C10	C13	C16	H16	186.7	359.9
N14	C13	C16	C10	177.1	180.1
C16	C13	N14	H14	1.3	359.9
C13	C16	C17	C02	180.0	180.0
C17	C16	C13	H16	180.0	180.1
C13	C16	C17	H17	360.0	360.0
C13	C16	C17	H16	180.0	179.9
C16	C17	C02	N03	181.8	360.0
C16	C17	C02	C01	2.1	179.7
C02	C17	C16	H17	180.0	180.0
C02	C17	C16	H16	360.0	0.1
C16	C17	C02	H17	180.0	180.0
N03	C02	C17	C01	179.8	180.2
C17	C02	N03	C04	180.0	180.0
C17	C02	C01	C06	180.0	179.7
C17	C02	C01	H01	360.0	360.0
C17	C02	N03	C01	180.2	179.8
N03	C02	C17	H17	1.8	179.9
N03	C02	C01	C06	0.2	359.5
N03	C02	C01	H01	180.2	179.8
C02	N03	C04	C05	0.3	0.0
C02	N03	C04	H04	180.3	180.0
C17	C02	C01	N03	179.7	180.2
C01	C02	C17	H17	182.1	359.7
C01	C02	N03	C04	359.8	0.2
C05	C06	C01	C02	359.8	0.6
C06	C01	C02	H01	180.0	179.7
C02	C01	C06	H06	179.8	180.3
C04	N03	C02	C01	359.8	0.2
N03	C04	C05	C06	359.8	0.0
C05	C04	N03	H04	180.0	180.0
N03	C04	C05	H05	179.7	179.9
N03	C04	C05	H04	180.0	180.0
C04	C05	C06	C01	0.2	359.7
C06	C05	C04	H05	180.0	180.1
C04	C05	C06	H06	180.2	180.0
C02	C01	C06	C05	359.8	0.6
C06	C05	C04	H04	179.8	180.0
C04	C05	C06	H05	180.0	179.9
C05	C06	C01	H01	179.8	180.3
C01	C06	C05	H06	180.0	179.7
C02	C01	C06	H01	180.0	180.3
C01	C06	C05	H05	180.3	179.7
C05	C06	C01	H06	180.0	180.3
H82	N82	C80	C23	6.5	0.3
C80	N82	H82	C88	180.0	179.9
H82	N82	C88	H881	359.9	240.0
H82	N82	C88	H882	120.0	360.0
H82	N82	C88	H883	240.0	120.0
H881	C88	N82	H82	359.9	240.0
N82	C88	H881	H882	120.0	119.9
N82	C88	H881	H883	240.0	240.0
H882	C88	H881	H883	120.0	120.1
H882	C88	N82	H82	120.0	360.0
N82	C88	H882	H881	240.0	240.1
N82	C88	H882	H883	120.0	120.0
H881	C88	H882	H883	240.0	239.9
H883	C88	N82	H82	240.0	120.0
N82	C88	H883	H881	120.0	119.9
N82	C88	H883	H882	240.0	240.0
H881	C88	H883	H882	120.0	120.1
H22	C22	C23	C18	180.7	180.3
C23	C22	H22	C21	180.0	180.0
H22	C22	C21	C20	179.3	180.0
H22	C22	C21	H21	359.2	360.0
C22	C21	H21	C20	180.0	180.0
H21	C21	C22	H22	359.2	360.0
H21	C21	C20	C19	181.2	180.0
H21	C21	C20	H20	1.3	359.9
C21	C20	H20	C19	180.0	180.1
H20	C20	C21	H21	1.3	359.9
H20	C20	C19	C18	178.2	179.7
H20	C20	C19	H19	358.2	360.0
C20	C19	H19	C18	180.0	179.7
H19	C19	C20	H20	358.2	360.0
H19	C19	C18	S24	359.8	0.0
H08	C08	C07	C12	180.7	180.2
C07	C08	H08	C09	180.0	179.9
H08	C08	C09	C10	179.3	180.0
H08	C08	C09	H09	359.3	359.9
C07	C12	H12	C11	180.0	180.1
H12	C12	C11	N15	0.8	0.1
H12	C12	C11	C10	180.0	180.0
C08	C09	H09	C10	180.0	180.1
H09	C09	C08	H08	359.3	359.9
H09	C09	C10	C11	180.5	179.8
H09	C09	C10	C13	358.4	0.2
N15	N14	H14	C13	180.0	180.0
H14	N14	C13	C10	178.9	180.0
H14	N14	C13	C16	1.3	359.9
C13	C16	H16	C17	180.0	180.1
H16	C16	C17	C02	360.0	0.1
H16	C16	C17	H17	180.0	180.1
C16	C17	H17	C02	180.0	180.0
H17	C17	C16	H16	180.0	180.1
H17	C17	C02	N03	1.8	179.9
H17	C17	C02	C01	182.1	359.7
C02	C01	H01	C06	180.0	179.7
H01	C01	C06	H06	359.8	360.0
N03	C04	H04	C05	180.0	180.0
H04	C04	C05	C06	179.8	180.0
H04	C04	C05	H05	359.7	360.0
C04	C05	H05	C06	180.0	180.1
H05	C05	C04	H04	359.7	360.0
H05	C05	C06	C01	180.3	179.7
H05	C05	C06	H06	0.3	0.1
C05	C06	H06	C01	180.0	179.7
H06	C06	C05	H05	0.3	0.1
H06	C06	C01	H01	359.8	360.0