PDB Chemical Component AX8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AX8
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAJ |
CAO |
1.395 |
1.383 |
CAJ |
CAM |
1.394 |
1.382 |
CAO |
CLAC |
1.730 |
1.736 |
CAO |
CAN |
1.394 |
1.385 |
CAN |
CLAB |
1.742 |
1.736 |
CAN |
CAG |
1.390 |
1.383 |
CAG |
CAF |
1.402 |
1.382 |
CAF |
CAM |
1.401 |
1.383 |
CAM |
CAK |
1.540 |
1.507 |
CAK |
NAS |
1.464 |
1.465 |
NAS |
CAR |
1.336 |
1.386 |
NAS |
CAP |
1.335 |
1.365 |
CAR |
CAI |
1.401 |
1.385 |
CAR |
CAQ |
1.398 |
1.405 |
CAI |
CAE |
1.401 |
1.380 |
CAE |
CAD |
1.396 |
1.387 |
CAD |
CAH |
1.395 |
1.377 |
CAH |
CAQ |
1.393 |
1.397 |
CAQ |
NAL |
1.341 |
1.359 |
NAL |
CAP |
1.337 |
1.310 |
CAP |
NAA |
1.338 |
1.379 |
CAJ |
HAJ |
1.080 |
1.080 |
CAG |
HAG |
1.080 |
1.080 |
CAF |
HAF |
1.080 |
1.079 |
CAK |
HAK |
1.100 |
1.090 |
CAK |
HAKA |
1.100 |
1.090 |
CAI |
HAI |
1.080 |
1.080 |
CAE |
HAE |
1.080 |
1.080 |
CAD |
HAD |
1.080 |
1.080 |
CAH |
HAH |
1.080 |
1.080 |
NAA |
HNAA |
1.000 |
0.970 |
NAA |
HNAB |
1.001 |
0.971 |
Bond Angles for AX8
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAO |
CAJ |
CAM |
119.9 |
120.0 |
CAJ |
CAO |
CLAC |
118.3 |
120.0 |
CAJ |
CAO |
CAN |
120.9 |
120.0 |
CAO |
CAJ |
HAJ |
120.0 |
120.0 |
CAJ |
CAM |
CAF |
119.3 |
120.0 |
CAJ |
CAM |
CAK |
118.7 |
120.0 |
CAM |
CAJ |
HAJ |
120.1 |
119.9 |
CLAC |
CAO |
CAN |
120.8 |
120.0 |
CAO |
CAN |
CLAB |
121.3 |
120.0 |
CAO |
CAN |
CAG |
119.6 |
119.9 |
CLAB |
CAN |
CAG |
119.1 |
120.1 |
CAN |
CAG |
CAF |
119.7 |
120.1 |
CAN |
CAG |
HAG |
120.1 |
119.9 |
CAG |
CAF |
CAM |
120.7 |
120.0 |
CAF |
CAG |
HAG |
120.2 |
120.0 |
CAG |
CAF |
HAF |
119.7 |
120.0 |
CAF |
CAM |
CAK |
122.1 |
119.9 |
CAM |
CAF |
HAF |
119.7 |
120.0 |
CAM |
CAK |
NAS |
110.4 |
109.4 |
CAM |
CAK |
HAK |
109.2 |
109.5 |
CAM |
CAK |
HAKA |
109.0 |
109.5 |
CAK |
NAS |
CAR |
125.6 |
126.3 |
CAK |
NAS |
CAP |
125.1 |
126.3 |
NAS |
CAK |
HAK |
109.2 |
109.5 |
NAS |
CAK |
HAKA |
108.9 |
109.5 |
CAR |
NAS |
CAP |
109.2 |
107.3 |
NAS |
CAR |
CAI |
133.5 |
133.9 |
NAS |
CAR |
CAQ |
105.6 |
106.1 |
NAS |
CAP |
NAL |
109.6 |
109.8 |
NAS |
CAP |
NAA |
125.0 |
125.1 |
CAI |
CAR |
CAQ |
120.9 |
120.0 |
CAR |
CAI |
CAE |
119.3 |
119.9 |
CAR |
CAI |
HAI |
120.4 |
120.1 |
CAR |
CAQ |
CAH |
119.6 |
119.5 |
CAR |
CAQ |
NAL |
108.6 |
107.1 |
CAI |
CAE |
CAD |
119.4 |
120.4 |
CAE |
CAI |
HAI |
120.3 |
120.1 |
CAI |
CAE |
HAE |
120.3 |
119.8 |
CAE |
CAD |
CAH |
121.1 |
120.5 |
CAD |
CAE |
HAE |
120.3 |
119.8 |
CAE |
CAD |
HAD |
119.4 |
119.7 |
CAD |
CAH |
CAQ |
119.6 |
119.8 |
CAH |
CAD |
HAD |
119.4 |
119.7 |
CAD |
CAH |
HAH |
120.2 |
120.1 |
CAH |
CAQ |
NAL |
131.9 |
133.4 |
CAQ |
CAH |
HAH |
120.2 |
120.1 |
CAQ |
NAL |
CAP |
107.0 |
109.7 |
NAL |
CAP |
NAA |
125.4 |
125.1 |
CAP |
NAA |
HNAA |
109.5 |
120.0 |
CAP |
NAA |
HNAB |
109.5 |
120.0 |
HAK |
CAK |
HAKA |
110.2 |
109.5 |
HNAA |
NAA |
HNAB |
109.5 |
120.0 |
Torsion Angles for AX8
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAO |
CAJ |
CAM |
CAF |
0.6 |
0.0 |
CAO |
CAJ |
CAM |
CAK |
179.8 |
180.0 |
CAM |
CAJ |
CAO |
HAJ |
180.0 |
180.2 |
CLAC |
CAO |
CAJ |
CAN |
179.9 |
180.0 |
CAJ |
CAO |
CAN |
CLAB |
179.6 |
180.0 |
CAJ |
CAO |
CAN |
CAG |
0.6 |
0.0 |
CAM |
CAJ |
CAO |
CLAC |
179.3 |
180.0 |
CAM |
CAJ |
CAO |
CAN |
359.4 |
360.0 |
CAO |
CAJ |
CAM |
HAJ |
180.0 |
179.8 |
CAG |
CAF |
CAM |
CAJ |
359.4 |
0.0 |
CAF |
CAM |
CAJ |
CAK |
180.9 |
180.0 |
CAJ |
CAM |
CAF |
HAF |
179.3 |
180.0 |
CAJ |
CAM |
CAK |
NAS |
175.3 |
90.0 |
CAJ |
CAM |
CAK |
HAK |
295.3 |
210.0 |
CAJ |
CAM |
CAK |
HAKA |
55.7 |
330.1 |
CLAC |
CAO |
CAJ |
CAM |
179.3 |
180.0 |
CAJ |
CAO |
CLAC |
CAN |
180.1 |
180.0 |
CLAC |
CAO |
CAJ |
HAJ |
359.3 |
359.8 |
CLAC |
CAO |
CAN |
CLAB |
359.7 |
360.0 |
CLAC |
CAO |
CAN |
CAG |
180.7 |
180.0 |
CAN |
CAO |
CAJ |
CAM |
359.4 |
360.0 |
CAJ |
CAO |
CAN |
CLAC |
179.9 |
180.0 |
CAN |
CAO |
CAJ |
HAJ |
179.4 |
179.7 |
CLAB |
CAN |
CAO |
CAG |
179.0 |
180.0 |
CAO |
CAN |
CAG |
CAF |
359.3 |
360.0 |
CAO |
CAN |
CAG |
HAG |
179.3 |
179.9 |
CAO |
CAN |
CLAB |
CAG |
181.0 |
180.0 |
CLAB |
CAN |
CAG |
CAF |
180.3 |
180.0 |
CLAB |
CAN |
CAG |
HAG |
0.3 |
360.0 |
CAO |
CAN |
CAG |
CLAB |
179.0 |
180.0 |
CAN |
CAG |
CAF |
CAM |
0.7 |
360.0 |
CAF |
CAG |
CAN |
HAG |
180.0 |
180.0 |
CAN |
CAG |
CAF |
HAF |
180.7 |
180.0 |
CAJ |
CAM |
CAF |
CAG |
359.4 |
0.0 |
CAN |
CAG |
CAF |
HAG |
180.0 |
180.0 |
CAG |
CAF |
CAM |
CAK |
180.2 |
180.0 |
CAM |
CAF |
CAG |
HAF |
180.0 |
180.0 |
CAJ |
CAM |
CAF |
CAK |
179.1 |
180.0 |
CAF |
CAM |
CAJ |
HAJ |
180.6 |
180.3 |
CAM |
CAF |
CAG |
HAG |
180.7 |
180.0 |
CAG |
CAF |
CAM |
HAF |
180.0 |
180.0 |
CAF |
CAM |
CAK |
NAS |
354.4 |
270.0 |
CAF |
CAM |
CAK |
HAK |
114.5 |
30.0 |
CAF |
CAM |
CAK |
HAKA |
234.8 |
150.0 |
CAJ |
CAM |
CAK |
CAF |
180.9 |
180.0 |
CAK |
CAM |
CAJ |
HAJ |
359.8 |
0.2 |
CAK |
CAM |
CAF |
HAF |
0.2 |
0.0 |
CAM |
CAK |
NAS |
CAR |
87.4 |
90.0 |
CAM |
CAK |
NAS |
CAP |
269.5 |
269.7 |
NAS |
CAK |
CAM |
HAK |
240.0 |
240.0 |
NAS |
CAK |
CAM |
HAKA |
119.6 |
120.0 |
HAK |
CAK |
CAM |
HAKA |
239.6 |
240.0 |
CAM |
CAK |
NAS |
HAK |
120.0 |
120.0 |
CAM |
CAK |
NAS |
HAKA |
240.4 |
240.0 |
CAR |
NAS |
CAK |
CAP |
177.9 |
180.4 |
CAK |
NAS |
CAR |
CAI |
1.9 |
360.0 |
CAK |
NAS |
CAR |
CAQ |
181.0 |
180.0 |
CAK |
NAS |
CAP |
NAL |
178.9 |
179.9 |
CAK |
NAS |
CAP |
NAA |
358.0 |
0.0 |
HAK |
CAK |
NAS |
HAKA |
120.4 |
120.0 |
CAK |
NAS |
CAR |
CAP |
181.8 |
179.7 |
CAR |
NAS |
CAK |
HAK |
327.4 |
330.0 |
CAR |
NAS |
CAK |
HAKA |
207.0 |
210.0 |
CAR |
NAS |
CAP |
NAL |
0.7 |
359.6 |
CAR |
NAS |
CAP |
NAA |
179.8 |
179.7 |
CAI |
CAR |
NAS |
CAQ |
180.9 |
180.0 |
NAS |
CAR |
CAI |
CAE |
179.4 |
180.0 |
NAS |
CAR |
CAI |
HAI |
359.4 |
360.0 |
NAS |
CAR |
CAQ |
CAH |
179.8 |
179.9 |
NAS |
CAR |
CAQ |
NAL |
0.7 |
0.0 |
CAK |
NAS |
CAP |
CAR |
178.2 |
180.3 |
CAP |
NAS |
CAK |
HAK |
149.5 |
149.7 |
CAP |
NAS |
CAK |
HAKA |
29.1 |
29.6 |
CAP |
NAS |
CAR |
CAI |
180.1 |
180.3 |
CAP |
NAS |
CAR |
CAQ |
359.2 |
0.3 |
CAQ |
NAL |
CAP |
NAS |
359.7 |
0.4 |
NAL |
CAP |
NAS |
NAA |
180.9 |
179.8 |
NAS |
CAP |
NAA |
HNAA |
277.5 |
360.0 |
NAS |
CAP |
NAA |
HNAB |
37.5 |
180.0 |
CAI |
CAR |
NAS |
CAP |
180.1 |
180.3 |
NAS |
CAR |
CAI |
CAQ |
179.0 |
180.0 |
CAI |
CAR |
CAQ |
CAH |
359.0 |
359.9 |
CAI |
CAR |
CAQ |
NAL |
179.9 |
180.0 |
CAR |
CAI |
CAE |
CAD |
0.3 |
359.9 |
CAE |
CAI |
CAR |
HAI |
180.0 |
180.1 |
CAR |
CAI |
CAE |
HAE |
180.3 |
179.9 |
CAQ |
CAR |
NAS |
CAP |
359.2 |
0.3 |
NAS |
CAR |
CAQ |
CAI |
180.8 |
180.0 |
CAQ |
CAR |
CAI |
CAE |
0.4 |
0.1 |
CAQ |
CAR |
CAI |
HAI |
180.5 |
180.0 |
CAD |
CAH |
CAQ |
CAR |
0.7 |
0.1 |
CAH |
CAQ |
CAR |
NAL |
179.2 |
179.9 |
CAR |
CAQ |
CAH |
HAH |
180.7 |
180.0 |
CAR |
CAQ |
NAL |
CAP |
359.7 |
359.7 |
CAE |
CAI |
CAR |
CAQ |
0.4 |
0.1 |
CAR |
CAI |
CAE |
HAI |
180.0 |
179.9 |
CAI |
CAE |
CAD |
CAH |
359.5 |
0.1 |
CAD |
CAE |
CAI |
HAE |
180.0 |
180.0 |
CAI |
CAE |
CAD |
HAD |
179.6 |
180.0 |
CAD |
CAE |
CAI |
HAI |
180.2 |
180.0 |
CAI |
CAE |
CAD |
HAE |
180.0 |
180.0 |
CAE |
CAD |
CAH |
CAQ |
360.0 |
359.9 |
CAH |
CAD |
CAE |
HAD |
180.0 |
180.1 |
CAE |
CAD |
CAH |
HAH |
180.0 |
179.9 |
CAR |
CAQ |
CAH |
CAD |
0.7 |
0.1 |
CAH |
CAD |
CAE |
HAE |
179.5 |
180.1 |
CAE |
CAD |
CAH |
HAD |
180.0 |
179.9 |
CAD |
CAH |
CAQ |
NAL |
179.7 |
180.0 |
CAQ |
CAH |
CAD |
HAH |
180.0 |
179.9 |
CAR |
CAQ |
CAH |
NAL |
181.1 |
180.1 |
CAQ |
CAH |
CAD |
HAD |
179.9 |
180.0 |
CAD |
CAH |
CAQ |
HAH |
180.0 |
180.1 |
CAH |
CAQ |
NAL |
CAP |
180.7 |
179.8 |
NAS |
CAP |
NAL |
CAQ |
359.7 |
0.4 |
CAR |
CAQ |
NAL |
CAH |
179.0 |
179.9 |
NAL |
CAQ |
CAH |
HAH |
359.6 |
359.9 |
CAQ |
NAL |
CAP |
NAA |
180.7 |
180.3 |
NAS |
CAP |
NAL |
NAA |
179.1 |
180.2 |
NAL |
CAP |
NAA |
HNAA |
96.4 |
180.2 |
NAL |
CAP |
NAA |
HNAB |
216.4 |
0.2 |
NAS |
CAP |
NAA |
NAL |
181.1 |
179.8 |
HNAA |
NAA |
CAP |
HNAB |
240.0 |
180.0 |
CAO |
CAJ |
HAJ |
CAM |
180.0 |
180.2 |
HAJ |
CAJ |
CAO |
CLAC |
359.3 |
359.8 |
HAJ |
CAJ |
CAO |
CAN |
179.4 |
179.7 |
HAJ |
CAJ |
CAM |
CAF |
180.6 |
180.3 |
HAJ |
CAJ |
CAM |
CAK |
359.8 |
0.2 |
CAN |
CAG |
HAG |
CAF |
180.0 |
180.0 |
HAG |
CAG |
CAF |
CAM |
180.7 |
180.0 |
HAG |
CAG |
CAF |
HAF |
0.7 |
0.0 |
CAG |
CAF |
HAF |
CAM |
180.0 |
180.0 |
HAF |
CAF |
CAG |
HAG |
0.7 |
0.0 |
HAF |
CAF |
CAM |
CAK |
0.2 |
0.0 |
CAM |
CAK |
HAK |
NAS |
239.2 |
240.0 |
CAM |
CAK |
HAK |
HAKA |
119.6 |
120.0 |
HAK |
CAK |
NAS |
CAR |
327.4 |
330.0 |
HAK |
CAK |
NAS |
CAP |
149.5 |
149.7 |
NAS |
CAK |
HAK |
HAKA |
240.4 |
240.0 |
CAM |
CAK |
HAKA |
NAS |
120.5 |
119.9 |
CAM |
CAK |
HAKA |
HAK |
240.3 |
240.0 |
HAKA |
CAK |
NAS |
CAR |
207.0 |
210.0 |
HAKA |
CAK |
NAS |
CAP |
29.1 |
29.6 |
NAS |
CAK |
HAKA |
HAK |
119.8 |
120.0 |
HAI |
CAI |
CAR |
CAQ |
180.5 |
180.0 |
CAR |
CAI |
HAI |
CAE |
180.0 |
180.1 |
HAI |
CAI |
CAE |
CAD |
180.2 |
180.0 |
HAI |
CAI |
CAE |
HAE |
0.3 |
0.0 |
CAI |
CAE |
HAE |
CAD |
180.0 |
180.0 |
HAE |
CAE |
CAI |
HAI |
0.3 |
0.0 |
HAE |
CAE |
CAD |
CAH |
179.5 |
180.1 |
HAE |
CAE |
CAD |
HAD |
359.5 |
360.0 |
CAE |
CAD |
HAD |
CAH |
180.0 |
180.1 |
HAD |
CAD |
CAE |
HAE |
359.5 |
360.0 |
HAD |
CAD |
CAH |
CAQ |
179.9 |
180.0 |
HAD |
CAD |
CAH |
HAH |
360.0 |
0.1 |
CAD |
CAH |
HAH |
CAQ |
180.0 |
179.9 |
HAH |
CAH |
CAD |
HAD |
360.0 |
0.1 |
HAH |
CAH |
CAQ |
NAL |
359.6 |
359.9 |
CAP |
NAA |
HNAA |
HNAB |
120.0 |
180.0 |
CAP |
NAA |
HNAB |
HNAA |
240.0 |
180.0 |