PDB Chemical Component AVC

Ideal Model

Chemical Description

Name ADENOSINE-5'-MONOPHOSPHATE-2',3'-VANADATE
Formula C10 H13 N5 O9 P V
Formal charge 0
Molecular weight 429.154 g/mol
Component type RNA LINKING
Nonstandard Parent Id A

Chemical features

Atom count 39
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Observed leaving atoms OP3
Bond count 42
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) [5'-adenylato(2-)-kappa~2~O~2'~,O~3'~](hydroxy)oxovanadium
Systematic name (OpenEye OEToolkits) [(1R,3S,5R,6R,8R)-6-(6-aminopurin-9-yl)-3-hydroxy-3-oxo-2,4,7-trioxa-3$l^{5}-vanadabicyclo[3.3.0]octan-8-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@H]4O[V](O)(=O)O[C@@H]34
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH]4O[V](O)(=O)O[CH]34
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3[C@H]4[C@@H]([C@H](O3)COP(=O)(O)O)O[V@@](=O)(O4)O)N
InChI descriptor InChI=1S/C10H12N5O7P.H2O.O.V/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20;;;/h2-4,6-7,10H,1H2,(H2,11,12,13)(H2,18,19,20);1H2;;/q-2;;;+3/p-1/t4-,6-,7-,10-;;;/m1.../s1
InChIKey descriptor RQINHAKDRDTLML-MSQVLRTGSA-M

Status Information

Last modified 2011-06-04
Created 2002-07-25
Release status REL
Processing site RCSB